Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|107600
Gene name
Locationscaffold_8:344513..345979
Strand+
Gene length (bp)1466
Transcript length (bp)1167
Coding sequence length (bp)1167
Protein length (aa) 389

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|107600
MPGRGLAVSFVWLSLTAIVWRYRPLHWVPTHSFTSSIYWTLRSWLWNYPITPDFGIWVVGDTTDRQRFFKEKART
RLIWTFLELYFAQRGYNLYVSSEESTYVVLPARRMIDPRELSYPYAQYCCNDERELEFICSAARVWPARDADGRD
VVIKAVSTGAVASNELKALKLLHSEPLRNDPRNRIIPVVDYIEFNHQTFAVMPRWSHCVQCDFVTVAEIIRYARA
YFETVAFLHENNITHGDILLQNMCMDVLMPQPFLERYYTGYHTSERRYVLIDFEGAEIHTGPGPYSLEFQNSRKR
DIYLLADSLGVNLRCIEHVIPRIGRLLDSMMAEDSEVTATTALFRFEEICSGLTMEDLNLAVAAHQFSHGKLQYR
QNPPVNQPVLGLN*
Coding >AgabiH97|107600
ATGCCTGGTCGAGGTCTGGCCGTCTCATTTGTCTGGCTTAGCCTCACCGCCATCGTGTGGCGATATAGACCCCTG
CACTGGGTTCCTACCCACTCTTTCACTAGCTCCATCTATTGGACTCTCCGCTCCTGGCTTTGGAACTACCCTATC
ACTCCGGATTTCGGTATCTGGGTTGTGGGTGATACGACAGACCGGCAAAGGTTCTTCAAGGAGAAAGCTCGAACT
CGGCTCATCTGGACGTTTTTGGAACTATATTTCGCCCAGCGAGGATACAATCTTTATGTATCATCGGAGGAATCA
ACCTATGTGGTGTTACCGGCACGCAGAATGATCGACCCCCGTGAATTGTCATATCCATATGCTCAGTATTGCTGC
AATGACGAAAGAGAATTAGAGTTCATCTGTAGTGCTGCTCGAGTATGGCCTGCTCGCGACGCGGATGGAAGAGAT
GTAGTGATCAAGGCGGTATCGACGGGTGCGGTAGCAAGCAATGAATTAAAGGCTTTGAAGCTTCTGCACTCTGAA
CCATTGCGCAATGACCCACGGAATAGAATTATACCAGTGGTAGATTATATCGAATTCAATCACCAAACATTCGCT
GTGATGCCGAGATGGAGTCATTGCGTTCAATGTGATTTTGTCACTGTTGCAGAAATCATCCGATATGCACGGGCA
TACTTTGAAACTGTCGCGTTCCTCCACGAAAATAACATCACACATGGGGACATTCTCCTCCAAAACATGTGCATG
GACGTACTTATGCCGCAGCCATTTTTAGAACGTTATTATACAGGATATCATACTTCCGAGCGCAGATATGTTCTC
ATCGATTTCGAAGGTGCTGAAATACATACAGGACCTGGGCCGTATTCACTTGAATTCCAGAATTCCAGAAAGCGT
GATATCTACCTTCTTGCAGACTCCCTCGGTGTCAACCTGCGATGCATCGAACATGTAATCCCTCGGATTGGTCGT
CTATTAGACTCAATGATGGCTGAAGACAGCGAAGTGACTGCTACTACTGCTCTTTTCCGGTTCGAAGAAATATGT
AGTGGCCTTACCATGGAGGACCTCAACCTTGCAGTGGCGGCACATCAGTTCTCTCATGGGAAATTACAGTATCGC
CAGAATCCACCCGTCAACCAACCGGTATTAGGTCTCAACTGA
Transcript >AgabiH97|107600
ATGCCTGGTCGAGGTCTGGCCGTCTCATTTGTCTGGCTTAGCCTCACCGCCATCGTGTGGCGATATAGACCCCTG
CACTGGGTTCCTACCCACTCTTTCACTAGCTCCATCTATTGGACTCTCCGCTCCTGGCTTTGGAACTACCCTATC
ACTCCGGATTTCGGTATCTGGGTTGTGGGTGATACGACAGACCGGCAAAGGTTCTTCAAGGAGAAAGCTCGAACT
CGGCTCATCTGGACGTTTTTGGAACTATATTTCGCCCAGCGAGGATACAATCTTTATGTATCATCGGAGGAATCA
ACCTATGTGGTGTTACCGGCACGCAGAATGATCGACCCCCGTGAATTGTCATATCCATATGCTCAGTATTGCTGC
AATGACGAAAGAGAATTAGAGTTCATCTGTAGTGCTGCTCGAGTATGGCCTGCTCGCGACGCGGATGGAAGAGAT
GTAGTGATCAAGGCGGTATCGACGGGTGCGGTAGCAAGCAATGAATTAAAGGCTTTGAAGCTTCTGCACTCTGAA
CCATTGCGCAATGACCCACGGAATAGAATTATACCAGTGGTAGATTATATCGAATTCAATCACCAAACATTCGCT
GTGATGCCGAGATGGAGTCATTGCGTTCAATGTGATTTTGTCACTGTTGCAGAAATCATCCGATATGCACGGGCA
TACTTTGAAACTGTCGCGTTCCTCCACGAAAATAACATCACACATGGGGACATTCTCCTCCAAAACATGTGCATG
GACGTACTTATGCCGCAGCCATTTTTAGAACGTTATTATACAGGATATCATACTTCCGAGCGCAGATATGTTCTC
ATCGATTTCGAAGGTGCTGAAATACATACAGGACCTGGGCCGTATTCACTTGAATTCCAGAATTCCAGAAAGCGT
GATATCTACCTTCTTGCAGACTCCCTCGGTGTCAACCTGCGATGCATCGAACATGTAATCCCTCGGATTGGTCGT
CTATTAGACTCAATGATGGCTGAAGACAGCGAAGTGACTGCTACTACTGCTCTTTTCCGGTTCGAAGAAATATGT
AGTGGCCTTACCATGGAGGACCTCAACCTTGCAGTGGCGGCACATCAGTTCTCTCATGGGAAATTACAGTATCGC
CAGAATCCACCCGTCAACCAACCGGTATTAGGTCTCAACTGA
Gene >AgabiH97|107600
ATGCCTGGTCGAGGTCTGGCCGTCTCATTTGTCTGGCTTAGCCTCACCGCCATCGTGTGGCGATATAGACCCCTG
CACTGGGTTCCTACCCACTCTTTCACTAGCTCCATCTATTGGACTCTCCGCTCCTGGCTTTGGAACTACCCTATC
ACTCCGGATTTCGGTATCTGGGTTGTGGGTGATACGACAGACCGGCAAAGGTTCTTCAAGGAGAAAGCTCGAACT
CGGCTCATCTGGACGTTTTTGGAACTATATTTCGCCCAGCGAGGATACAATCTTTATGTATCATCGGAGGAATCA
ACCTATGTGGTGTTACCGGCACGCAGAATGATCGACCCCCGTGAATTGTCATATCCATATGCTCAGTATTGCTGC
AATGACGAAAGAGAATTAGAGTTCATCTGTAGTGTATATGATACTTGAATCAGAGAGCTTGACTCTGACACTTTT
TATCAGGCTGCTCGAGTATGGCCTGCTCGCGACGCGGATGGAAGAGATGTAGTGATCAAGTATGGGGTCTTTCAT
TCCATTATTTTCATGCTTTTTATTCTAAAGGGCGGTATCGACGGGTGCGGTAGCAAGCAATGAATTAAAGGCTTT
GAAGCTTCTGCACTCTGAACCATTGCGCAATGACCCACGGAATAGAATTATACCAGTGGTAGATTATATCGAATT
CAATCACCAAACATTCGCTGTGATGCCGAGGTAAGTTTTCTCTAGTTCTTCATATGAGAATTCAAGGACCTGAAT
TCTCGTAGATGGAGTCATTGCGTTCAATGTGATTTTGTCACTGTTGCAGAAATCATCCGATATGCACGGGCATAC
TTTGAAGTAAGTGGTGACTTTCACGCAGGTTCTTATCTCGGTAAACGTCATCCAGACTGTCGCGTTCCTCCACGA
AAATAACATCACACATGGGGACATTCTCCTCCAAAACATGTGCATGGACGTACTTATGCCGCAGCCATTTTTAGA
ACGTTATTATACAGGATATCATACTTCCGAGCGCAGATATGTTCTCATCGATTTCGAAGGTGCTGAAATACATAC
AGGACCTGGGCCGTATTCACTTGAATTCCAGAATTCCAGAAAGCGTGATATCTACCTTCTTGCAGACTCCCTCGG
TGTCAACCTGCGAGTGCGTATGCAATTCGTCTCATCCAACCGCGCAATGACGTCGACAATAGTGCATCGAACATG
TAATCCCTCGGATTGGTCGTCTATTAGACTCAATGATGGCTGAAGACAGCGAAGTGACTGCTACTACTGCTCTTT
TCCGGTTCGAAGAAATATGTAGTGGCCTTACCATGGAGGACCTCAACCTTGCAGTGGCGGCACATCAGTTCTCTC
ATGGTATGTTTTCCTTCCTGATCCGTTTATGAGCCAATTGCGCATATTTTGAGCTAGGGAAATTACAGTATCGCC
AGAATCCACCCGTCAACCAACCGGTATTAGGTCTCAACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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