Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|107260
Gene name
Locationscaffold_8:252895..254746
Strand-
Gene length (bp)1851
Transcript length (bp)1560
Coding sequence length (bp)1560
Protein length (aa) 520

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.3975 0.8523 0.3503 0.0424 0.0787 0.1428 0.1248 0.0768 0.048 0.0108

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup7701
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|094080
Agaricus bisporus var bisporus H39 AgabiH39|383200
Agaricus bisporus var bisporus H97 AgabiH97|025460
Agaricus bisporus var bisporus H97 AgabiH97|025470
Agaricus bisporus var bisporus H97 AgabiH97|036580
Agaricus bisporus var bisporus H97 AgabiH97|094080
Agaricus bisporus var bisporus H97 AgabiH97|107260 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|107270

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|107260
MQPVCVWAPALGLAITDADLFLILAVDEEEIEEISSDAEEAEPTTEEEAPPPKASRSKCRYTGTPPPKAAKAIKQ
EKASDAPSQARTVKAQPKAFVGKPIARATTSVSTTRQAKGKAKQAKGSSPDRSVLLIKENTKLQAANPPPAKAKR
GNRNTTRLVDDYALVSSHPFLDHLPALFKVARSFSSNTLPAGGNCISCKANFLACGHRFKAPAADVEAATADVEA
TASDAAALISCSSCAHLGRPHCTHAKLAGLAQYLAEVLRLYGLSSELHLRVSSRNISVEITELASIQKLYSLVEA
RVISDTARHAAEILVAKAEHENDPGYFVGAGLISSKDQLPDLFSICDSFFPSGDESPEEAAVRLYQANRALLLFI
EEVNGLKEGGNVWPSLPEHPGFLPSSDELHDRGIAVDAALLAGDLHPLNAIAGPSGSSISEARASAAPEDAGGYF
SLSQTGEVLTTIDPALLAIGPPNVTVGEGEAESASGAGRVAYIGIAPSFFCCCILDPSVAAYLSVCRFL*
Coding >AgabiH97|107260
ATGCAACCAGTCTGCGTTTGGGCACCGGCTCTGGGATTAGCTATTACTGATGCTGATTTGTTTCTGATTCTAGCT
GTTGACGAAGAGGAGATAGAGGAAATCTCGTCTGATGCTGAAGAGGCTGAACCCACAACTGAGGAAGAAGCTCCT
CCTCCGAAGGCGTCGCGTTCAAAATGTCGTTACACCGGTACCCCCCCTCCTAAGGCTGCTAAAGCTATCAAGCAG
GAGAAAGCTTCCGATGCTCCGTCCCAAGCTAGGACTGTTAAGGCTCAACCCAAAGCTTTCGTCGGCAAGCCCATA
GCTAGAGCCACCACATCCGTCTCTACCACTCGACAAGCTAAAGGAAAGGCTAAGCAGGCTAAGGGGTCTTCTCCT
GACCGCTCGGTTTTATTGATCAAGGAGAATACAAAGCTTCAAGCTGCCAATCCTCCTCCGGCGAAGGCTAAACGT
GGTAACCGGAACACTACTAGACTTGTGGACGACTATGCTTTAGTTTCCAGCCATCCGTTCCTTGATCACCTTCCT
GCCCTTTTTAAGGTTGCTAGGTCTTTTAGCTCTAATACCTTGCCAGCAGGTGGGAATTGTATATCCTGCAAGGCT
AATTTCTTAGCTTGTGGCCACCGTTTCAAGGCTCCTGCTGCTGATGTAGAGGCGGCTACTGCCGATGTCGAAGCT
ACCGCTTCGGATGCCGCTGCCCTCATTTCCTGCTCTTCTTGTGCTCATCTGGGCCGTCCGCACTGTACTCACGCT
AAGCTGGCTGGTTTAGCTCAATACTTAGCAGAGGTATTAAGGCTTTACGGGCTGTCTAGCGAGTTGCATCTTCGC
GTTAGCTCCCGCAATATCAGCGTAGAGATTACGGAGCTAGCTAGCATCCAAAAGCTTTATAGCTTAGTCGAGGCG
CGCGTTATATCTGACACTGCTCGTCACGCTGCCGAAATCCTGGTAGCTAAGGCTGAACACGAAAACGATCCTGGA
TATTTCGTTGGCGCTGGTCTTATTTCTAGCAAAGACCAGCTTCCTGATCTGTTTTCTATCTGCGATAGCTTTTTC
CCTTCCGGCGATGAATCCCCTGAAGAAGCTGCTGTGCGTCTCTACCAAGCTAATCGTGCTTTACTGCTGTTCATC
GAAGAAGTCAATGGTTTGAAAGAGGGGGGAAACGTCTGGCCCTCCCTTCCTGAACATCCTGGATTCCTTCCTTCA
TCTGATGAGCTTCATGACCGAGGCATAGCGGTCGACGCTGCTCTTTTAGCTGGGGATCTCCATCCTCTCAACGCC
ATAGCTGGACCTTCTGGGTCGTCTATTTCTGAAGCTAGGGCCTCTGCTGCCCCTGAAGACGCAGGTGGGTATTTT
AGCTTGAGCCAAACTGGTGAGGTGTTGACCACCATTGATCCAGCGCTCCTAGCTATCGGGCCCCCGAATGTCACT
GTGGGTGAAGGTGAAGCTGAGTCCGCTTCTGGGGCTGGTAGGGTTGCTTACATAGGTATTGCCCCTTCATTTTTC
TGCTGCTGTATACTCGATCCTTCTGTTGCTGCCTATCTGTCTGTCTGTCGTTTCTTGTAG
Transcript >AgabiH97|107260
ATGCAACCAGTCTGCGTTTGGGCACCGGCTCTGGGATTAGCTATTACTGATGCTGATTTGTTTCTGATTCTAGCT
GTTGACGAAGAGGAGATAGAGGAAATCTCGTCTGATGCTGAAGAGGCTGAACCCACAACTGAGGAAGAAGCTCCT
CCTCCGAAGGCGTCGCGTTCAAAATGTCGTTACACCGGTACCCCCCCTCCTAAGGCTGCTAAAGCTATCAAGCAG
GAGAAAGCTTCCGATGCTCCGTCCCAAGCTAGGACTGTTAAGGCTCAACCCAAAGCTTTCGTCGGCAAGCCCATA
GCTAGAGCCACCACATCCGTCTCTACCACTCGACAAGCTAAAGGAAAGGCTAAGCAGGCTAAGGGGTCTTCTCCT
GACCGCTCGGTTTTATTGATCAAGGAGAATACAAAGCTTCAAGCTGCCAATCCTCCTCCGGCGAAGGCTAAACGT
GGTAACCGGAACACTACTAGACTTGTGGACGACTATGCTTTAGTTTCCAGCCATCCGTTCCTTGATCACCTTCCT
GCCCTTTTTAAGGTTGCTAGGTCTTTTAGCTCTAATACCTTGCCAGCAGGTGGGAATTGTATATCCTGCAAGGCT
AATTTCTTAGCTTGTGGCCACCGTTTCAAGGCTCCTGCTGCTGATGTAGAGGCGGCTACTGCCGATGTCGAAGCT
ACCGCTTCGGATGCCGCTGCCCTCATTTCCTGCTCTTCTTGTGCTCATCTGGGCCGTCCGCACTGTACTCACGCT
AAGCTGGCTGGTTTAGCTCAATACTTAGCAGAGGTATTAAGGCTTTACGGGCTGTCTAGCGAGTTGCATCTTCGC
GTTAGCTCCCGCAATATCAGCGTAGAGATTACGGAGCTAGCTAGCATCCAAAAGCTTTATAGCTTAGTCGAGGCG
CGCGTTATATCTGACACTGCTCGTCACGCTGCCGAAATCCTGGTAGCTAAGGCTGAACACGAAAACGATCCTGGA
TATTTCGTTGGCGCTGGTCTTATTTCTAGCAAAGACCAGCTTCCTGATCTGTTTTCTATCTGCGATAGCTTTTTC
CCTTCCGGCGATGAATCCCCTGAAGAAGCTGCTGTGCGTCTCTACCAAGCTAATCGTGCTTTACTGCTGTTCATC
GAAGAAGTCAATGGTTTGAAAGAGGGGGGAAACGTCTGGCCCTCCCTTCCTGAACATCCTGGATTCCTTCCTTCA
TCTGATGAGCTTCATGACCGAGGCATAGCGGTCGACGCTGCTCTTTTAGCTGGGGATCTCCATCCTCTCAACGCC
ATAGCTGGACCTTCTGGGTCGTCTATTTCTGAAGCTAGGGCCTCTGCTGCCCCTGAAGACGCAGGTGGGTATTTT
AGCTTGAGCCAAACTGGTGAGGTGTTGACCACCATTGATCCAGCGCTCCTAGCTATCGGGCCCCCGAATGTCACT
GTGGGTGAAGGTGAAGCTGAGTCCGCTTCTGGGGCTGGTAGGGTTGCTTACATAGGTATTGCCCCTTCATTTTTC
TGCTGCTGTATACTCGATCCTTCTGTTGCTGCCTATCTGTCTGTCTGTCGTTTCTTGTAG
Gene >AgabiH97|107260
ATGCAACCAGTCTGCGTTTGGGCACCGGTCAATAAATTCTGATTTAAACCAAAAAAACAAAAAAAAATCCCTAAA
GCTCGTAGGTTTTCTTCAGGCTCTGGGATTAGCTATTACTGATGCTGATTTGTTTCTGATTCTAGCTGTTGACGA
AGAGGAGATAGAGTAAGTAGCTTGCTACTTTTATTGTTCAAGCTAACTTTGTCTTTTCCTAGGGAAATCTCGTCT
GATGCTGAAGAGGCTGAACCCACAACTGAGGAAGAAGCTCCTCCTCCGAAGGCGTCGCGTTCAAAATGTCGTTAC
ACCGGTACCCCCCCTCCTAAGGCTGCTAAAGCTATCAAGCAGGAGAAAGCTTCCGATGCTCCGTCCCAAGCTAGG
ACTGTTAAGGCTCAACCCAAAGCTTTCGTCGGCAAGCCCATAGCTAGAGCCACCACATCCGTCTCTACCACTCGA
CAAGCTAAAGGAAAGGCTAAGCAGGCTAAGGGGTCTTCTCCTGACCGCTCGGTTTTATTGATCAAGGAGAATACA
AAGCTTCAAGCTGCCAATCCTCCTCCGGCGAAGGCTAAACGTGGTAGCTTTCATTTTATTCTTCTGTCTCTGCCT
AGCTAACCCATTCTGAACTGGCAGGTAACCGGAACACTACTAGACTTGTGGACGACTATGCTTTAGTTTCCAGCC
ATCCGTTCCTTGATCACCTTCCTGCCCTTTTTAAGGTTGCTAGGTCTTTTAGCTCTGTACGTCTGCTAACTTCTT
TATATGCTGTCGCTGTAGCTAACAGTTTTTTTTTATGGCTGTTACAGAATACCTTGCCAGCAGGTGGGAATTGTA
TATCCTGCAAGGCTAATTTCTTAGCTTGTGGCCACCGTTTCAAGGCTCCTGCTGCTGATGTAGAGGCGGCTACTG
CCGATGTCGAAGCTACCGCTTCGGATGCCGCTGCCCTCATTTCCTGCTCTTCTTGTGCTCATCTGGGCCGTCCGC
ACTGTACTCACGCTAAGCTGGCTGGTTTAGCTCAATACTTAGCAGAGGTATTAAGGCTTTACGGGCTGTCTAGCG
AGTTGCGTGCGTACCTCTTTTATTCATATAGCTGATTTTTACTGATGATTTAGCTTAGATCTTCGCGTTAGCTCC
CGCAATATCAGCGTAGAGATTACGGAGCTAGCTAGCATCCAAAAGCTTTATAGCTTAGTCGAGGCGCGCGTTATA
TCTGACACTGCTCGTCACGCTGCCGAAATCCTGGTAGCTAAGGCTGAACACGAAAACGATCCTGGATATTTCGTT
GGCGCTGGTCTTATTTCTAGCAAAGACCAGCTTCCTGATCTGTTTTCTATCTGCGATAGCTTTTTCCCTTCCGGC
GATGAATCCCCTGAAGAAGCTGCTGTGCGTCTCTACCAAGCTAATCGTGCTTTACTGCTGTTCATCGAAGAAGTC
AATGGTTTGAAAGAGGGGGGAAACGTCTGGCCCTCCCTTCCTGAACATCCTGGATTCCTTCCTTCATCTGATGAG
CTTCATGACCGAGGCATAGCGGTCGACGCTGCTCTTTTAGCTGGGGATCTCCATCCTCTCAACGCCATAGCTGGA
CCTTCTGGGTCGTCTATTTCTGAAGCTAGGGCCTCTGCTGCCCCTGAAGACGCAGGTGGGTATTTTAGCTTGAGC
CAAACTGGTGAGGTGTTGACCACCATTGATCCAGCGCTCCTAGCTATCGGGCCCCCGAATGTCACTGTGGGTGAA
GGTGAAGCTGAGTCCGCTTCTGGGGCTGGTAGGGTTGCTTACATAGGTATTGCCCCTTCATTTTTCTGCTGCTGT
ATACTCGATCCTTCTGTTGCTGCCTATCTGTCTGTCTGTCGTTTCTTGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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