© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|106530 |
| Gene name | |
| Location | scaffold_8:64626..66520 |
| Strand | - |
| Gene length (bp) | 1894 |
| Transcript length (bp) | 1209 |
| Coding sequence length (bp) | 1209 |
| Protein length (aa) | 403 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.0E-13 | 36 | 270 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q08280|BSC6_YEAST | Bypass of stop codon protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BSC6 PE=1 SV=1 | 43 | 402 | 5.0E-29 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 48 | 70 | 22 |
| 2 | 77 | 96 | 19 |
| 3 | 100 | 119 | 19 |
| 4 | 139 | 161 | 22 |
| 5 | 166 | 188 | 22 |
| 6 | 226 | 248 | 22 |
| 7 | 258 | 280 | 22 |
| 8 | 287 | 305 | 18 |
| 9 | 309 | 331 | 22 |
| 10 | 338 | 360 | 22 |
| 11 | 375 | 397 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|106530 MPELELESLSHRKTHPDEDIEIKKRPGNRKIQRRFSLPLCAGDVYHVGFTIVSLIFIFACLGFVSGALANVHLTD RLGFGKTIILGAALQIIAYTIQSPAPPFPVFVMAYTINGVGIALQDAQANGFVASLRNNSETKMGLLHAAYGAGA LASPLVATQFSQLRQWSFHFLVSLGIAVSNIIILYIVFGFKTQDECLRLLGQEVSEKNEDEQSSFKQILRVKAVH FLAFFILVYVGVEVTIGGWIVTFMLDVRGGGPSSGYVSSGFFGGLMLGRVLLLWVNKKIGERLVLFLYAFLAIGL ELVIWFVPSLIGGAVAVSIVGLLLGPMYPVAMNHAGRVLPNWLLTGSIGWIAGFGQAGSAALPFITGVISSKHGI RSLQPLLIAMMGCMMILWYLVPSKRHD* |
| Coding | >AgabiH97|106530 ATGCCAGAGCTAGAACTCGAATCTCTCTCGCACCGTAAAACACACCCAGATGAAGATATTGAAATAAAGAAAAGA CCAGGAAACAGAAAAATACAGAGAAGATTCAGTTTGCCGCTCTGTGCTGGTGACGTTTATCATGTCGGATTTACC ATCGTATCCTTGATCTTCATATTTGCCTGTCTGGGCTTTGTTTCTGGTGCTCTCGCAAACGTACACCTCACTGAC CGTTTGGGATTTGGCAAGACAATCATTCTCGGTGCTGCGCTGCAAATCATTGCATACACAATCCAATCGCCAGCA CCCCCCTTCCCTGTGTTTGTGATGGCATATACTATCAATGGTGTTGGCATCGCTCTCCAGGATGCTCAGGCCAAT GGCTTCGTTGCCAGCCTGAGAAACAACTCGGAAACCAAGATGGGTCTCCTACATGCTGCTTATGGCGCCGGTGCC CTAGCCTCACCCCTCGTTGCGACTCAGTTCTCACAACTTCGTCAATGGTCCTTCCACTTTCTCGTATCCCTCGGC ATTGCAGTCTCCAACATCATCATCCTCTATATCGTCTTTGGGTTTAAAACACAAGATGAGTGCCTTCGGCTTCTT GGACAAGAAGTATCGGAAAAGAACGAAGATGAACAATCCTCATTCAAACAGATCCTTCGCGTTAAAGCCGTACAT TTTCTCGCATTCTTCATTCTTGTCTACGTTGGCGTCGAAGTCACCATCGGAGGGTGGATTGTTACATTTATGCTC GACGTCCGTGGTGGCGGACCGTCCTCGGGCTACGTTTCATCTGGTTTCTTTGGTGGCCTGATGCTTGGTCGAGTC CTCCTACTCTGGGTCAACAAAAAGATCGGTGAACGCCTAGTTTTATTCCTCTATGCATTCCTTGCCATCGGGCTC GAACTCGTGATTTGGTTTGTTCCTTCCCTTATCGGAGGAGCAGTCGCCGTCTCCATCGTCGGTCTCCTTCTCGGA CCCATGTATCCGGTCGCCATGAATCACGCAGGCCGCGTCCTTCCGAACTGGTTACTCACGGGCTCTATTGGTTGG ATAGCGGGATTCGGTCAAGCAGGAAGCGCAGCTCTTCCTTTCATCACTGGTGTAATTTCTTCAAAACATGGCATT CGGAGTCTCCAACCATTACTGATTGCAATGATGGGTTGCATGATGATCTTGTGGTATCTCGTACCATCCAAAAGA CATGACTAA |
| Transcript | >AgabiH97|106530 ATGCCAGAGCTAGAACTCGAATCTCTCTCGCACCGTAAAACACACCCAGATGAAGATATTGAAATAAAGAAAAGA CCAGGAAACAGAAAAATACAGAGAAGATTCAGTTTGCCGCTCTGTGCTGGTGACGTTTATCATGTCGGATTTACC ATCGTATCCTTGATCTTCATATTTGCCTGTCTGGGCTTTGTTTCTGGTGCTCTCGCAAACGTACACCTCACTGAC CGTTTGGGATTTGGCAAGACAATCATTCTCGGTGCTGCGCTGCAAATCATTGCATACACAATCCAATCGCCAGCA CCCCCCTTCCCTGTGTTTGTGATGGCATATACTATCAATGGTGTTGGCATCGCTCTCCAGGATGCTCAGGCCAAT GGCTTCGTTGCCAGCCTGAGAAACAACTCGGAAACCAAGATGGGTCTCCTACATGCTGCTTATGGCGCCGGTGCC CTAGCCTCACCCCTCGTTGCGACTCAGTTCTCACAACTTCGTCAATGGTCCTTCCACTTTCTCGTATCCCTCGGC ATTGCAGTCTCCAACATCATCATCCTCTATATCGTCTTTGGGTTTAAAACACAAGATGAGTGCCTTCGGCTTCTT GGACAAGAAGTATCGGAAAAGAACGAAGATGAACAATCCTCATTCAAACAGATCCTTCGCGTTAAAGCCGTACAT TTTCTCGCATTCTTCATTCTTGTCTACGTTGGCGTCGAAGTCACCATCGGAGGGTGGATTGTTACATTTATGCTC GACGTCCGTGGTGGCGGACCGTCCTCGGGCTACGTTTCATCTGGTTTCTTTGGTGGCCTGATGCTTGGTCGAGTC CTCCTACTCTGGGTCAACAAAAAGATCGGTGAACGCCTAGTTTTATTCCTCTATGCATTCCTTGCCATCGGGCTC GAACTCGTGATTTGGTTTGTTCCTTCCCTTATCGGAGGAGCAGTCGCCGTCTCCATCGTCGGTCTCCTTCTCGGA CCCATGTATCCGGTCGCCATGAATCACGCAGGCCGCGTCCTTCCGAACTGGTTACTCACGGGCTCTATTGGTTGG ATAGCGGGATTCGGTCAAGCAGGAAGCGCAGCTCTTCCTTTCATCACTGGTGTAATTTCTTCAAAACATGGCATT CGGAGTCTCCAACCATTACTGATTGCAATGATGGGTTGCATGATGATCTTGTGGTATCTCGTACCATCCAAAAGA CATGACTAA |
| Gene | >AgabiH97|106530 ATGCCAGAGCTAGAACTCGAATCTCTCTCGCACCGTAAAACACACCCAGATGAAGATATTGAAATAAAGAAAAGT GATGATGCTGTGGAAGATCCTATTCACCAAGCTCTGACCGACAACAGGACCAGGAAACAGAAAAATACAGAGAAG ATTCAGTTTGCCGCTCTGTGCTGGTGTCTCTTCCTTGCTGGATGGAACGATGGGTCAACTGGTCCTTTACTGCCT CGGATACAGGACGTTTATCATGTGCATCTCACCCAGCCCCGTAACTGCGTTCAACTAACCTACACACGCAGGTCG GATTTACCATCGTATCCTTGATCTTCATATTTGCCTGTCTGGTCAGTCGTCTCTCGTTTCTTTATTCTGTCTATC GCTTCACGAGTTACAGGGCTTTGTTTCTGGTGCTCTCGCAAACGTACACCTCACTGACCGTTTGGGATTTGGCAA GGTCTGTACTCCACCGTGCTCCAGATATACTTGATTTACAATATACTTGAACAGACAATCATTCTCGGTAAAATG CCTATTCATCGTCCCTTTGAATATCGACTTTTAAACGAAAAACATTCCAGGTGCTGCGCTGCAAATCATTGCATA CACAATCCAATCGCCAGCACCCCCCTTCCCTGTGTTTGTGATGGCATATACTATCAATGGTGTTGGCATCGCTCT CCAGGTACATAGCATGCTCCCATGAACACCGGAAACTCACGATACTGTATGTAACAGGATGCTCAGGCCAATGGC TTCGTTGCCAGCCTGAGAAACAACTCGGAAACCAAGATGGGTCTCCTACATGCTGCTTATGGTGACCTACTACGT AACCTCACAGACGCGCCATTTAACCTCTCTTTCACAGGCGCCGGTGCCCTAGCCTCACCCCTCGTTGCGACTCAG TTCTCACAACTTCGTCAATGGTCCTTCCACTTTCTCGTATCCCTCGGCATTGCAGTCTCCAACATCATCATCCTC TATATCGTCTTTGGGTTTAAAACACAAGATGGTAAGCTCCGCTTAACTCACCATCCATAAAAATTCCTACTTATC TGTTATCAGAGTGCCTTCGGCTTCTTGGACAAGAAGTATCGGAAAAGAACGAAGATGAACAATCCTCATTCAAAC AGATCCTTCGCGTTAAAGCCGTACATTTTCTCGCATTCTTCATTCTTGTCTACGTTGGCGTCGAAGTCACCATCG GAGGGTGGATTGTTACATTTATGCTCGACGTCCGTGGTGGCGGACCGTCCTCGGGCTACGTTTCATCTGGTTTCT TTGGTGGTAAGACATCGCTCCATCCACTCTAGTTTCAACATTCACGCAATTCGAAAGGCCTGATGCTTGGTCGAG TCCTCCTACTCTGGGTCAACAAAAAGGTACGCTGTCTCGTGCAAGTCATTGCTTGACTCCTCACGAAATATACCC AGATCGGTGAACGCCTAGTTTTATTCCTCTATGCATTCCTTGCCATCGGGTAATTCATGTCATTATCCCACCAAT ACATAGAATAGCCTAACCGTTCTGCCAGGCTCGAACTCGTGATTTGGTTTGTTCCTTCCCTTATCGGAGGAGCAG TCGCCGTCTCCATCGTCGGTCTCCTTCTCGGACCCATGTATCCGGTCGCCATGAATCACGCAGGCCGCGTCCTTC CGAACTGGTTACTCACGGGCTCTATTGGTTGGATAGCGGGATTCGGTCAAGCAGGAAGCGCAGCTCTTCCTTTCA TCACTGGTGTAATTTCTTCAAAACATGGCATTCGGAGTCTCCAACCATTGTGAGTGTTATCTGTGAAAATAACCG GCGTGATCTGTAACCTTGTCTCCCCAGACTGATTGCAATGATGGGTTGCATGATGATCTTGTGGTATCTCGTACC ATCCAAAAGACATGACTAA |