© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|106470 |
| Gene name | |
| Location | scaffold_8:48769..50692 |
| Strand | - |
| Gene length (bp) | 1923 |
| Transcript length (bp) | 1332 |
| Coding sequence length (bp) | 1332 |
| Protein length (aa) | 444 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.3E-16 | 61 | 311 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q08280|BSC6_YEAST | Bypass of stop codon protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BSC6 PE=1 SV=1 | 13 | 438 | 2.0E-32 |
| sp|O07563|GLCP_BACSU | Glucose/mannose transporter GlcP OS=Bacillus subtilis (strain 168) GN=glcP PE=1 SV=1 | 74 | 408 | 4.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 64 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 56 | 74 | 18 |
| 2 | 89 | 111 | 22 |
| 3 | 118 | 137 | 19 |
| 4 | 141 | 160 | 19 |
| 5 | 181 | 203 | 22 |
| 6 | 207 | 229 | 22 |
| 7 | 267 | 289 | 22 |
| 8 | 299 | 321 | 22 |
| 9 | 328 | 346 | 18 |
| 10 | 350 | 372 | 22 |
| 11 | 379 | 401 | 22 |
| 12 | 416 | 438 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|106470 MEQETMSHRKGHAEEHDIEMTRIISQTPKGNTVEDPAVEQEGGDLRTRKQKNSEKIQFAALCWCLFLAGWNDGST GPLLPRIQDVYHVGFTVVSLIFIFACLGFVSGALANVHLTDRLGFGKTLILGAALQIIAYAMQSSAPPFPVFVMA YTINGVGGALQDAQANGFVANLRSDSETKMGLLHAAYGAGALASPLIATQFSLLRQWSFHFLVSLGIAISNIIIL YTVFGFKTQDECLRLLGQEVPEKNEDEQTSFKQILRVKAVHFLAFFILVYVGVEVTIGGWIVTFMLDVRGGGPSS GYVSSGFFGGLMLGRVLLLWVNKKIGERLVLFLYAFLAIGLELVIWFVPSLIGGAVAVSIVGLLLGPMYPIAMNH AGRVLPNWLLTGSIGWIAGFGQAGSAALPFITGVISSKHGIRSLQPLLIAMMGCMMVLWYLVPSKRRD* |
| Coding | >AgabiH97|106470 ATGGAACAAGAAACCATGTCGCACCGCAAAGGCCACGCTGAAGAGCATGACATTGAAATGACGAGAATCATCTCT CAGACACCCAAAGGTAATACAGTCGAAGATCCGGCGGTTGAACAAGAAGGGGGCGACTTGAGGACTAGGAAACAG AAAAATTCAGAGAAAATCCAGTTTGCAGCTCTGTGCTGGTGTCTCTTCCTTGCCGGATGGAACGATGGATCAACA GGTCCTTTACTGCCTCGAATACAGGATGTTTATCATGTCGGATTTACCGTCGTATCCTTGATCTTCATATTTGCC TGCCTCGGCTTTGTTTCTGGTGCTCTCGCAAACGTACATCTCACTGACCGTTTGGGATTTGGCAAGACACTTATT CTCGGTGCTGCGCTGCAAATCATCGCATATGCAATGCAATCATCAGCTCCACCCTTCCCTGTATTTGTAATGGCG TATACTATTAATGGCGTTGGCGGTGCTCTCCAGGATGCCCAGGCCAATGGCTTCGTTGCCAACCTTCGAAGCGAC TCGGAAACCAAGATGGGTCTCCTACATGCTGCTTATGGTGCTGGTGCCCTAGCCTCTCCACTTATCGCGACGCAG TTTTCATTGCTCCGTCAGTGGTCCTTCCACTTCCTCGTATCCCTCGGCATTGCAATCTCCAACATAATAATCCTC TATACCGTATTTGGATTTAAAACGCAAGATGAATGCCTCCGGCTCCTTGGACAAGAAGTACCAGAAAAGAACGAA GATGAACAAACCTCATTCAAACAGATCCTTCGCGTTAAAGCCGTACATTTCCTCGCATTCTTCATTCTTGTCTAC GTTGGCGTCGAAGTCACCATCGGAGGGTGGATTGTTACATTTATGCTCGACGTCCGTGGTGGCGGACCGTCCTCG GGCTACGTTTCATCTGGTTTCTTTGGTGGTCTGATGCTTGGTCGAGTCCTCCTACTCTGGGTAAACAAAAAGATC GGTGAACGCCTCGTCTTATTTCTCTATGCATTCCTTGCCATCGGGCTCGAACTCGTGATTTGGTTTGTTCCTTCC CTTATCGGAGGAGCAGTCGCCGTCTCCATCGTCGGTCTCCTGCTAGGGCCCATGTATCCCATCGCTATGAATCAT GCGGGGCGCGTCCTTCCAAACTGGTTACTCACGGGCTCTATTGGTTGGATAGCGGGATTCGGTCAAGCAGGAAGC GCAGCTCTTCCTTTCATCACTGGTGTAATTTCTTCAAAGCATGGCATTCGGAGTCTCCAACCACTACTGATTGCG ATGATGGGTTGCATGATGGTCTTGTGGTATCTCGTACCGTCCAAGCGTCGTGATTGA |
| Transcript | >AgabiH97|106470 ATGGAACAAGAAACCATGTCGCACCGCAAAGGCCACGCTGAAGAGCATGACATTGAAATGACGAGAATCATCTCT CAGACACCCAAAGGTAATACAGTCGAAGATCCGGCGGTTGAACAAGAAGGGGGCGACTTGAGGACTAGGAAACAG AAAAATTCAGAGAAAATCCAGTTTGCAGCTCTGTGCTGGTGTCTCTTCCTTGCCGGATGGAACGATGGATCAACA GGTCCTTTACTGCCTCGAATACAGGATGTTTATCATGTCGGATTTACCGTCGTATCCTTGATCTTCATATTTGCC TGCCTCGGCTTTGTTTCTGGTGCTCTCGCAAACGTACATCTCACTGACCGTTTGGGATTTGGCAAGACACTTATT CTCGGTGCTGCGCTGCAAATCATCGCATATGCAATGCAATCATCAGCTCCACCCTTCCCTGTATTTGTAATGGCG TATACTATTAATGGCGTTGGCGGTGCTCTCCAGGATGCCCAGGCCAATGGCTTCGTTGCCAACCTTCGAAGCGAC TCGGAAACCAAGATGGGTCTCCTACATGCTGCTTATGGTGCTGGTGCCCTAGCCTCTCCACTTATCGCGACGCAG TTTTCATTGCTCCGTCAGTGGTCCTTCCACTTCCTCGTATCCCTCGGCATTGCAATCTCCAACATAATAATCCTC TATACCGTATTTGGATTTAAAACGCAAGATGAATGCCTCCGGCTCCTTGGACAAGAAGTACCAGAAAAGAACGAA GATGAACAAACCTCATTCAAACAGATCCTTCGCGTTAAAGCCGTACATTTCCTCGCATTCTTCATTCTTGTCTAC GTTGGCGTCGAAGTCACCATCGGAGGGTGGATTGTTACATTTATGCTCGACGTCCGTGGTGGCGGACCGTCCTCG GGCTACGTTTCATCTGGTTTCTTTGGTGGTCTGATGCTTGGTCGAGTCCTCCTACTCTGGGTAAACAAAAAGATC GGTGAACGCCTCGTCTTATTTCTCTATGCATTCCTTGCCATCGGGCTCGAACTCGTGATTTGGTTTGTTCCTTCC CTTATCGGAGGAGCAGTCGCCGTCTCCATCGTCGGTCTCCTGCTAGGGCCCATGTATCCCATCGCTATGAATCAT GCGGGGCGCGTCCTTCCAAACTGGTTACTCACGGGCTCTATTGGTTGGATAGCGGGATTCGGTCAAGCAGGAAGC GCAGCTCTTCCTTTCATCACTGGTGTAATTTCTTCAAAGCATGGCATTCGGAGTCTCCAACCACTACTGATTGCG ATGATGGGTTGCATGATGGTCTTGTGGTATCTCGTACCGTCCAAGCGTCGTGATTGA |
| Gene | >AgabiH97|106470 ATGGAACAAGAAACCATGTCGCACCGCAAAGGCCACGCTGAAGAGCATGACATTGAAATGACGAGAATCATCTCT CAGACACCCAAAGGTAATACAGTCGAAGATCCGGCGGTTGAACAAGAAGGGGGCGACTTGAGGACTAGGAAACAG AAAAATTCAGAGAAAATCCAGTTTGCAGCTCTGTGCTGGTGTCTCTTCCTTGCCGGATGGAACGATGGATCAACA GGTCCTTTACTGCCTCGAATACAGGATGTTTATCATGTGCATCTCACCCAGCCCCGTAACTGCGCGCAACTAACC GATACACACAGGTCGGATTTACCGTCGTATCCTTGATCTTCATATTTGCCTGCCTCGTCAGTCGCCTCTCGTTTC TTAATTCTGTTTATCGCCTCACGGGTTACAGGGCTTTGTTTCTGGTGCTCTCGCAAACGTACATCTCACTGACCG TTTGGGATTTGGCAAGGTTTGTACTCCACTATGCTCACTGGACATGCTTGAGCTCACATATAAATCGAACAGACA CTTATTCTCGGTAAAATTATTCATGATTACTTTTGGCCCTAATTTAAAACGAAAAAAAACAGGTGCTGCGCTGCA AATCATCGCATATGCAATGCAATCATCAGCTCCACCCTTCCCTGTATTTGTAATGGCGTATACTATTAATGGCGT TGGCGGTGCTCTCCAGGTACATAGTATCTTTATAAGGTTATAAGATACCAGCAGCTCACGACAATTTGCGTTATA GGATGCCCAGGCCAATGGCTTCGTTGCCAACCTTCGAAGCGACTCGGAAACCAAGATGGGTCTCCTACATGCTGC TTATGGTGACTTACTACGTAATTTCACAGGACAAGCCCGAGCCCTCTGACCAGTCTTTCATAGGTGCTGGTGCCC TAGCCTCTCCACTTATCGCGACGCAGTTTTCATTGCTCCGTCAGTGGTCCTTCCACTTCCTCGTATCCCTCGGCA TTGCAATCTCCAACATAATAATCCTCTATACCGTATTTGGATTTAAAACGCAAGATGGTCAGCGCCACCCAACAC CCCATCTATGTATATTCATGCTTATCTGTTCTCAGAATGCCTCCGGCTCCTTGGACAAGAAGTACCAGAAAAGAA CGAAGATGAACAAACCTCATTCAAACAGATCCTTCGCGTTAAAGCCGTACATTTCCTCGCATTCTTCATTCTTGT CTACGTTGGCGTCGAAGTCACCATCGGAGGGTGGATTGTTACATTTATGCTCGACGTCCGTGGTGGCGGACCGTC CTCGGGCTACGTTTCATCTGGTTTCTTTGGTGGTAAGACATCTCTCCATCCACTCTAGTTTCAACATTCACGCAA TTCGAAAGGTCTGATGCTTGGTCGAGTCCTCCTACTCTGGGTAAACAAAAAGGTACGCTGTCTCGTGCAAATCAT TGTTTGACCCCACCTGACGAAATATACCCAGATCGGTGAACGCCTCGTCTTATTTCTCTATGCATTCCTTGCCAT CGGGTAATTTATGTTGTTATCCCACCAATTCATAGAATAGCCTAACCGTTCTGCCAGGCTCGAACTCGTGATTTG GTTTGTTCCTTCCCTTATCGGAGGAGCAGTCGCCGTCTCCATCGTCGGTCTCCTGCTAGGGCCCATGTATCCCAT CGCTATGAATCATGCGGGGCGCGTCCTTCCAAACTGGTTACTCACGGGCTCTATTGGTTGGATAGCGGGATTCGG TCAAGCAGGAAGCGCAGCTCTTCCTTTCATCACTGGTGTAATTTCTTCAAAGCATGGCATTCGGAGTCTCCAACC ACTGTGAGTGCTGTCCGTAAAAAATAACTACGCTAATCTGTATTTCCTCTCCTCAGACTGATTGCGATGATGGGT TGCATGATGGTCTTGTGGTATCTCGTACCGTCCAAGCGTCGTGATTGA |