Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|105980
Gene name
Location	scaffold_7:2261226..2261755
Strand	+
Gene length (bp)	529
Transcript length (bp)	423
Coding sequence length (bp)	423
Protein length (aa)	141

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF19271	Nis1	Nis1 family	1.2E-11	21	137

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 17	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|105980 MKIVAALLACLTATRAQHVLIGYPPEGANLTAGHTTTIEIQRPNFQSSSEEVAIVLGITSCPNTLCPAPADTMGH ILHNGPFDPKEHPLTPLIQPYQNFTVELPGDLPKGKAQLNVYHVALIGESFVPFNETLRTSVFVK*
Coding	>AgabiH97\|105980 ATGAAAATTGTAGCTGCTCTTCTCGCCTGCCTTACTGCTACAAGAGCTCAACACGTTCTCATCGGATACCCTCCT GAAGGAGCGAATCTTACTGCTGGCCATACCACTACAATCGAAATTCAACGCCCGAATTTCCAATCGTCATCGGAA GAAGTAGCGATTGTGCTTGGGATCACGTCCTGCCCCAATACTCTCTGCCCAGCGCCCGCCGATACGATGGGTCAT ATCCTTCACAACGGTCCTTTCGATCCAAAGGAACATCCATTGACGCCCTTAATACAACCTTACCAAAACTTTACC GTCGAGCTGCCAGGGGATCTACCTAAGGGCAAGGCACAGCTTAACGTTTACCATGTCGCACTCATAGGGGAGAGT TTCGTACCGTTTAACGAAACGTTGAGGACCAGCGTCTTCGTTAAATAG
Transcript	>AgabiH97\|105980 ATGAAAATTGTAGCTGCTCTTCTCGCCTGCCTTACTGCTACAAGAGCTCAACACGTTCTCATCGGATACCCTCCT GAAGGAGCGAATCTTACTGCTGGCCATACCACTACAATCGAAATTCAACGCCCGAATTTCCAATCGTCATCGGAA GAAGTAGCGATTGTGCTTGGGATCACGTCCTGCCCCAATACTCTCTGCCCAGCGCCCGCCGATACGATGGGTCAT ATCCTTCACAACGGTCCTTTCGATCCAAAGGAACATCCATTGACGCCCTTAATACAACCTTACCAAAACTTTACC GTCGAGCTGCCAGGGGATCTACCTAAGGGCAAGGCACAGCTTAACGTTTACCATGTCGCACTCATAGGGGAGAGT TTCGTACCGTTTAACGAAACGTTGAGGACCAGCGTCTTCGTTAAATAG
Gene	>AgabiH97\|105980 ATGAAAATTGTAGCTGCTCTTCTCGCCTGCCTTACTGCTACAAGAGCTCAACACGTTCTCATCGGATACCCTCCT GAAGGAGCGAATCTTACTGCTGGCCATACCACTACAATCGAAATTCAACGCCCGGTAGGTTGTGTTGTTCTTTTA GAATCTACCGCGTATTTATCAGCTTTAGAATTTCCAATCGTCATCGGAAGAAGTAGCGATTGTGCTTGGGATCAC GTCCTGCCCCAATACTCTCTGCCCAGCGCCCGCCGATACGATGGGTCATATCCTTCACAACGGTCCTTTCGATCC AAAGGAACATCCATTGACGCCCTTAATACAACCTTACCAAAACTTTACCGTCGAGCTGCCAGGGGATCTACCTAA GGGCAAGGCACAGCTTAACGTTTACCATGTCGCACTCATAGGGGTGAGTTTATATCTCCACACCAGGTAATGATT AAAGTTTACCATGGTGACTTTACAGGAGAGTTTCGTACCGTTTAACGAAACGTTGAGGACCAGCGTCTTCGTTAA ATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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