Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|105860
Gene name
Locationscaffold_7:2237098..2239474
Strand+
Gene length (bp)2376
Transcript length (bp)1494
Coding sequence length (bp)1494
Protein length (aa) 498

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00083 Sugar_tr Sugar (and other) transporter 7.0E-34 26 456
PF07690 MFS_1 Major Facilitator Superfamily 4.9E-33 46 389

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P36035|JEN1_YEAST Carboxylic acid transporter protein homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=JEN1 PE=1 SV=1 17 444 1.0E-71
sp|O51798|MMLH_CUPPJ Probable 4-methylmuconolactone transporter OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) GN=mmlH PE=3 SV=1 37 451 1.0E-25
sp|P94131|MUCK_ACIAD Cis,cis-muconate transport protein OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=mucK PE=3 SV=1 47 387 3.0E-25
sp|A4TMJ0|NANT_YERPP Putative sialic acid transporter OS=Yersinia pestis (strain Pestoides F) GN=nanT PE=3 SV=1 11 403 3.0E-24
sp|Q668K2|NANT_YERPS Putative sialic acid transporter OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=nanT PE=3 SV=1 11 403 1.0E-23
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P36035|JEN1_YEAST Carboxylic acid transporter protein homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=JEN1 PE=1 SV=1 17 444 1.0E-71
sp|O51798|MMLH_CUPPJ Probable 4-methylmuconolactone transporter OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) GN=mmlH PE=3 SV=1 37 451 1.0E-25
sp|P94131|MUCK_ACIAD Cis,cis-muconate transport protein OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=mucK PE=3 SV=1 47 387 3.0E-25
sp|A4TMJ0|NANT_YERPP Putative sialic acid transporter OS=Yersinia pestis (strain Pestoides F) GN=nanT PE=3 SV=1 11 403 3.0E-24
sp|Q668K2|NANT_YERPS Putative sialic acid transporter OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=nanT PE=3 SV=1 11 403 1.0E-23
sp|A9QZJ2|NANT_YERPG Putative sialic acid transporter OS=Yersinia pestis bv. Antiqua (strain Angola) GN=nanT PE=3 SV=1 11 403 1.0E-23
sp|B2K942|NANT_YERPB Putative sialic acid transporter OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=nanT PE=3 SV=1 11 403 1.0E-23
sp|A7FG99|NANT_YERP3 Putative sialic acid transporter OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=nanT PE=3 SV=1 11 403 1.0E-23
sp|B1JFW5|NANT_YERPY Putative sialic acid transporter OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=nanT PE=3 SV=1 11 403 2.0E-23
sp|Q1C5V2|NANT_YERPA Putative sialic acid transporter OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=nanT PE=3 SV=1 11 403 4.0E-22
sp|Q8ZCH3|NANT_YERPE Putative sialic acid transporter OS=Yersinia pestis GN=nanT PE=3 SV=1 11 403 4.0E-22
sp|C0PZN3|NANT_SALPC Putative sialic acid transporter OS=Salmonella paratyphi C (strain RKS4594) GN=nanT PE=3 SV=1 33 387 2.0E-21
sp|Q57JD0|NANT_SALCH Putative sialic acid transporter OS=Salmonella choleraesuis (strain SC-B67) GN=nanT PE=3 SV=1 33 387 2.0E-21
sp|B5F7J8|NANT_SALA4 Putative sialic acid transporter OS=Salmonella agona (strain SL483) GN=nanT PE=3 SV=1 33 387 2.0E-21
sp|B5BGP4|NANT_SALPK Putative sialic acid transporter OS=Salmonella paratyphi A (strain AKU_12601) GN=nanT PE=3 SV=1 33 387 6.0E-21
sp|Q5PLF0|NANT_SALPA Putative sialic acid transporter OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=nanT PE=3 SV=1 33 387 6.0E-21
sp|B4TWI9|NANT_SALSV Putative sialic acid transporter OS=Salmonella schwarzengrund (strain CVM19633) GN=nanT PE=3 SV=1 33 387 7.0E-21
sp|A7MJD1|NANT_CROS8 Putative sialic acid transporter OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=nanT PE=3 SV=1 33 404 7.0E-21
sp|B5FIR7|NANT_SALDC Putative sialic acid transporter OS=Salmonella dublin (strain CT_02021853) GN=nanT PE=3 SV=1 33 387 7.0E-21
sp|B5R0L1|NANT_SALEP Putative sialic acid transporter OS=Salmonella enteritidis PT4 (strain P125109) GN=nanT PE=3 SV=1 33 387 7.0E-21
sp|B4T749|NANT_SALNS Putative sialic acid transporter OS=Salmonella newport (strain SL254) GN=nanT PE=3 SV=1 33 387 7.0E-21
sp|A9N832|NANT_SALPB Putative sialic acid transporter OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=nanT PE=3 SV=1 33 387 7.0E-21
sp|P0A2G5|NANT_SALTY Putative sialic acid transporter OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=nanT PE=3 SV=1 33 387 7.0E-21
sp|P0A2G6|NANT_SALTI Putative sialic acid transporter OS=Salmonella typhi GN=nanT PE=3 SV=1 33 387 7.0E-21
sp|B5RET6|NANT_SALG2 Putative sialic acid transporter OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=nanT PE=3 SV=1 33 387 7.0E-21
sp|B4TJR2|NANT_SALHS Putative sialic acid transporter OS=Salmonella heidelberg (strain SL476) GN=nanT PE=3 SV=1 33 226 8.0E-21
sp|Q8FDU9|NANT2_ECOL6 Putative sialic acid transporter 2 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=nanT2 PE=3 SV=1 33 402 1.0E-20
sp|A9MNY7|NANT_SALAR Putative sialic acid transporter OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=nanT PE=3 SV=1 33 215 1.0E-20
sp|B7LRJ2|NANT_ESCF3 Putative sialic acid transporter OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=nanT PE=3 SV=1 33 226 4.0E-20
sp|B5YSV1|NANT_ECO5E Putative sialic acid transporter OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=nanT PE=3 SV=1 33 403 8.0E-20
sp|Q8X9G8|NANT_ECO57 Putative sialic acid transporter OS=Escherichia coli O157:H7 GN=nanT PE=3 SV=2 33 403 8.0E-20
sp|A8A534|NANT_ECOHS Putative sialic acid transporter OS=Escherichia coli O9:H4 (strain HS) GN=nanT PE=3 SV=1 33 226 8.0E-20
sp|P59699|NANT_SHIFL Putative sialic acid transporter OS=Shigella flexneri GN=nanT PE=3 SV=1 33 226 9.0E-20
sp|B7LHS8|NANT_ECO55 Putative sialic acid transporter OS=Escherichia coli (strain 55989 / EAEC) GN=nanT PE=3 SV=1 33 226 9.0E-20
sp|B7M0T6|NANT_ECO8A Putative sialic acid transporter OS=Escherichia coli O8 (strain IAI1) GN=nanT PE=3 SV=1 33 226 9.0E-20
sp|B1IQQ5|NANT_ECOLC Putative sialic acid transporter OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=nanT PE=3 SV=1 33 226 9.0E-20
sp|B2U1W0|NANT_SHIB3 Putative sialic acid transporter OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=nanT PE=3 SV=1 33 226 9.0E-20
sp|Q0T066|NANT_SHIF8 Putative sialic acid transporter OS=Shigella flexneri serotype 5b (strain 8401) GN=nanT PE=3 SV=1 33 226 9.0E-20
sp|A8AQB4|NANT_CITK8 Putative sialic acid transporter OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=nanT PE=3 SV=1 33 215 9.0E-20
sp|P41036|NANT_ECOLI Putative sialic acid transporter OS=Escherichia coli (strain K12) GN=nanT PE=1 SV=2 33 226 1.0E-19
sp|B1XHJ7|NANT_ECODH Putative sialic acid transporter OS=Escherichia coli (strain K12 / DH10B) GN=nanT PE=3 SV=1 33 226 1.0E-19
sp|C4ZSW2|NANT_ECOBW Putative sialic acid transporter OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=nanT PE=3 SV=1 33 226 1.0E-19
sp|B7MBY6|NANT_ECO45 Putative sialic acid transporter OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=nanT PE=3 SV=1 33 215 2.0E-19
sp|A7ZSB7|NANT_ECO24 Putative sialic acid transporter OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=nanT PE=3 SV=1 33 215 2.0E-19
sp|B1LGI9|NANT_ECOSM Putative sialic acid transporter OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=nanT PE=3 SV=1 33 215 2.0E-19
sp|B7UJV7|NANT_ECO27 Putative sialic acid transporter OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=nanT PE=3 SV=1 33 215 2.0E-19
sp|B6I1U2|NANT_ECOSE Putative sialic acid transporter OS=Escherichia coli (strain SE11) GN=nanT PE=3 SV=1 33 215 2.0E-19
sp|Q0TCP2|NANT_ECOL5 Putative sialic acid transporter OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=nanT PE=3 SV=1 33 215 2.0E-19
sp|Q8FD59|NANT1_ECOL6 Putative sialic acid transporter 1 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=nanT1 PE=3 SV=2 33 215 2.0E-19
sp|B7NKT5|NANT_ECO7I Putative sialic acid transporter OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=nanT PE=3 SV=1 33 215 2.0E-19
sp|O34691|NAIP_BACSU Putative niacin/nicotinamide transporter NaiP OS=Bacillus subtilis (strain 168) GN=naiP PE=1 SV=1 42 450 1.0E-16
sp|P71369|Y1104_HAEIN Putative metabolite transport protein HI_1104 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1104 PE=3 SV=1 47 386 4.0E-16
sp|P39352|YJHB_ECOLI Putative metabolite transport protein YjhB OS=Escherichia coli (strain K12) GN=yjhB PE=1 SV=2 33 385 1.0E-15
sp|P0C0L7|PROP_ECOLI Proline/betaine transporter OS=Escherichia coli (strain K12) GN=proP PE=1 SV=1 77 397 1.0E-09
sp|P0C0L8|PROP_ECO57 Proline/betaine transporter OS=Escherichia coli O157:H7 GN=proP PE=3 SV=1 77 397 1.0E-09
sp|P40862|PROP_SALTY Proline/betaine transporter OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=proP PE=3 SV=2 77 397 1.0E-09
sp|O30513|BENK_ACIAD Benzoate transport protein OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=benK PE=3 SV=2 86 231 2.0E-08
sp|P37498|YYBF_BACSU Uncharacterized MFS-type transporter YybF OS=Bacillus subtilis (strain 168) GN=yybF PE=3 SV=1 42 221 6.0E-08
sp|Q80UJ1|S22AK_MOUSE Solute carrier family 22 member 20 OS=Mus musculus GN=Slc22a20 PE=1 SV=1 66 230 3.0E-07
sp|Q43975|PCAK_ACIAD 4-hydroxybenzoate transporter PcaK OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=pcaK PE=1 SV=3 27 240 3.0E-07
sp|Q4R4X3|SV2A_MACFA Synaptic vesicle glycoprotein 2A OS=Macaca fascicularis GN=SV2A PE=2 SV=1 85 218 5.0E-07
sp|Q9USN4|YJA1_SCHPO Uncharacterized transporter C1529.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1529.01 PE=3 SV=2 76 241 5.0E-07
sp|Q29397|SV2A_BOVIN Synaptic vesicle glycoprotein 2A OS=Bos taurus GN=SV2A PE=2 SV=1 85 218 5.0E-07
sp|Q5R4L9|SV2A_PONAB Synaptic vesicle glycoprotein 2A OS=Pongo abelii GN=SV2A PE=2 SV=1 85 218 6.0E-07
sp|Q7L0J3|SV2A_HUMAN Synaptic vesicle glycoprotein 2A OS=Homo sapiens GN=SV2A PE=1 SV=1 85 218 6.0E-07
sp|Q02563|SV2A_RAT Synaptic vesicle glycoprotein 2A OS=Rattus norvegicus GN=Sv2a PE=1 SV=2 85 218 6.0E-07
sp|Q9JIS5|SV2A_MOUSE Synaptic vesicle glycoprotein 2A OS=Mus musculus GN=Sv2a PE=1 SV=1 85 218 6.0E-07
sp|Q9C101|YKT8_SCHPO Uncharacterized MFS-type transporter PB1E7.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB1E7.08c PE=1 SV=1 33 381 1.0E-06
sp|Q6GBR4|PROP_STAAS Putative proline/betaine transporter OS=Staphylococcus aureus (strain MSSA476) GN=proP PE=3 SV=1 68 398 1.0E-06
sp|Q8NXW9|PROP_STAAW Putative proline/betaine transporter OS=Staphylococcus aureus (strain MW2) GN=proP PE=3 SV=1 68 398 1.0E-06
sp|Q9KWK6|PROP_STAA1 Putative proline/betaine transporter OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=proP PE=3 SV=3 68 398 1.0E-06
sp|Q99W36|PROP_STAAM Putative proline/betaine transporter OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=proP PE=3 SV=1 68 398 1.0E-06
sp|Q7A771|PROP_STAAN Putative proline/betaine transporter OS=Staphylococcus aureus (strain N315) GN=proP PE=3 SV=1 68 398 1.0E-06
sp|Q4W8A2|S22A8_MACFA Solute carrier family 22 member 8 OS=Macaca fascicularis GN=SLC22A8 PE=2 SV=1 85 171 1.0E-06
sp|Q5HIA2|PROP_STAAC Putative proline/betaine transporter OS=Staphylococcus aureus (strain COL) GN=proP PE=3 SV=1 68 398 1.0E-06
sp|B4EYY4|MDTG_PROMH Multidrug resistance protein MdtG OS=Proteus mirabilis (strain HI4320) GN=mdtG PE=3 SV=1 74 331 2.0E-06
sp|Q9I6Q3|PCAK_PSEAE 4-hydroxybenzoate transporter PcaK OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=pcaK PE=3 SV=1 33 184 2.0E-06
sp|Q8TCC7|S22A8_HUMAN Solute carrier family 22 member 8 OS=Homo sapiens GN=SLC22A8 PE=1 SV=1 85 171 3.0E-06
sp|Q5R9C4|S22A8_PONAB Solute carrier family 22 member 8 OS=Pongo abelii GN=SLC22A8 PE=2 SV=1 85 171 3.0E-06
sp|Q6GJ96|PROP_STAAR Putative proline/betaine transporter OS=Staphylococcus aureus (strain MRSA252) GN=proP PE=3 SV=1 32 472 4.0E-06
sp|Q51955|PCAK_PSEPU 4-hydroxybenzoate transporter PcaK OS=Pseudomonas putida GN=pcaK PE=1 SV=1 29 194 4.0E-06
sp|Q5EXK5|MHBT_KLEOX 3-hydroxybenzoate transporter MhbT OS=Klebsiella oxytoca GN=mhbT PE=1 SV=1 33 215 5.0E-06
sp|A6NK97|S22AK_HUMAN Solute carrier family 22 member 20 OS=Homo sapiens GN=SLC22A20 PE=2 SV=1 66 215 6.0E-06
sp|Q8N4V2|SVOP_HUMAN Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1 33 214 6.0E-06
sp|Q1JP63|SVOP_BOVIN Synaptic vesicle 2-related protein OS=Bos taurus GN=SVOP PE=2 SV=1 33 214 7.0E-06
sp|Q5R5T8|SVOP_PONAB Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1 33 214 7.0E-06
sp|P76350|SHIA_ECOLI Shikimate transporter OS=Escherichia coli (strain K12) GN=shiA PE=3 SV=1 80 175 7.0E-06
sp|O52733|XYLT_LACBR D-xylose-proton symporter OS=Lactobacillus brevis GN=xylT PE=3 SV=1 76 229 8.0E-06
sp|P30638|SVOP_CAEEL Putative transporter svop-1 OS=Caenorhabditis elegans GN=svop-1 PE=3 SV=5 42 395 9.0E-06
[Show less]

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005215 transporter activity No
GO:0110165 cellular anatomical entity No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.5

Transmembrane Domains

Domain # Start End Length
1 22 44 22
2 72 94 22
3 101 123 22
4 127 149 22
5 156 178 22
6 193 212 19
7 250 269 19
8 289 311 22
9 318 340 22
10 419 441 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Casing Casing mycelium 381.52 204.43 558.62
Initials Initials knots 468.99 243.19 694.79
Pileal_Stipeal_center Stage I stipe center 122.96 67.24 178.69
Pileal_Stipeal_shell Stage I stipe shell 67.41 39.03 95.80
DIF_stipe_center Stage II stipe center 47.44 27.64 67.23
DIF_stipe_shell Stage II stipe shell 57.43 33.90 80.96
DIF_stipe_skin Stage II stipe skin 138.98 78.70 199.26
DIF_cap_skin Stage II cap skin 81.22 47.32 115.12
DIF_cap_tissue Stage II cap tissue 39.32 21.48 57.15
DIF_gill_tissue Stage II gill tissue 24.64 12.79 36.49
YFB_stipe_center Young fruiting body stipe center 85.69 49.50 121.88
YFB_stipe_shell Young fruiting body stipe shell 29.31 16.34 42.29
YFB_stipe_skin Young fruiting body stipe skin 87.37 52.32 122.42
YFB_cap_skin Young fruiting body cap skin 105.71 63.27 148.15
YFB_cap_tissue Young fruiting body cap tissue 11.09 5.34 16.84
YFB_gill_tissue Young fruiting body gill tissue 264.16 103.22 425.10
YFB_veil Young fruiting body veil 80.62 45.12 116.12

Differential expression

Label1 Label2 Q-value Significant difference
Casing DIF_gill_tissue 0.000613 yes
Casing YFB_stipe_center 0.000613 yes
Casing YFB_stipe_shell 0.000613 yes
Casing YFB_stipe_skin 0.000613 yes
Casing YFB_cap_skin 0.000613 yes
Casing YFB_cap_tissue 0.000613 yes
Casing YFB_gill_tissue 0.400834 no
Casing YFB_veil 0.000613 yes
Casing Initials 0.639198 no
Casing Pileal_Stipeal_center 0.000613 yes
Casing Pileal_Stipeal_shell 0.000613 yes
Casing DIF_stipe_center 0.000613 yes
Casing DIF_stipe_shell 0.000613 yes
Casing DIF_stipe_skin 0.000613 yes
Casing DIF_cap_skin 0.000613 yes
Casing DIF_cap_tissue 0.000613 yes
DIF_gill_tissue YFB_stipe_center 0.000613 yes
DIF_gill_tissue YFB_stipe_shell 0.706693 no
DIF_gill_tissue YFB_stipe_skin 0.000613 yes
DIF_gill_tissue YFB_cap_skin 0.000613 yes
DIF_gill_tissue YFB_cap_tissue 0.016104 yes
DIF_gill_tissue YFB_gill_tissue 0.000613 yes
DIF_gill_tissue YFB_veil 0.000613 yes
YFB_stipe_center YFB_stipe_shell 0.000613 yes
YFB_stipe_center YFB_stipe_skin 0.973253 no
YFB_stipe_center YFB_cap_skin 0.582435 no
YFB_stipe_center YFB_cap_tissue 0.000613 yes
YFB_stipe_center YFB_gill_tissue 0.001140 yes
YFB_stipe_center YFB_veil 0.917073 no
YFB_stipe_shell YFB_stipe_skin 0.000613 yes
YFB_stipe_shell YFB_cap_skin 0.000613 yes
YFB_stipe_shell YFB_cap_tissue 0.001625 yes
YFB_stipe_shell YFB_gill_tissue 0.000613 yes
YFB_stipe_shell YFB_veil 0.000613 yes
YFB_stipe_skin YFB_cap_skin 0.615697 no
YFB_stipe_skin YFB_cap_tissue 0.000613 yes
YFB_stipe_skin YFB_gill_tissue 0.002525 yes
YFB_stipe_skin YFB_veil 0.878852 no
YFB_cap_skin YFB_cap_tissue 0.000613 yes
YFB_cap_skin YFB_gill_tissue 0.009446 yes
YFB_cap_skin YFB_veil 0.461664 no
YFB_cap_tissue YFB_gill_tissue 0.000613 yes
YFB_cap_tissue YFB_veil 0.000613 yes
YFB_gill_tissue YFB_veil 0.000613 yes
Initials DIF_gill_tissue 0.000613 yes
Initials YFB_stipe_center 0.000613 yes
Initials YFB_stipe_shell 0.000613 yes
Initials YFB_stipe_skin 0.000613 yes
Initials YFB_cap_skin 0.000613 yes
Initials YFB_cap_tissue 0.000613 yes
Initials YFB_gill_tissue 0.136458 no
Initials YFB_veil 0.000613 yes
Initials Pileal_Stipeal_center 0.000613 yes
Initials Pileal_Stipeal_shell 0.000613 yes
Initials DIF_stipe_center 0.000613 yes
Initials DIF_stipe_shell 0.000613 yes
Initials DIF_stipe_skin 0.000613 yes
Initials DIF_cap_skin 0.000613 yes
Initials DIF_cap_tissue 0.000613 yes
Pileal_Stipeal_center DIF_gill_tissue 0.000613 yes
Pileal_Stipeal_center YFB_stipe_center 0.279465 no
Pileal_Stipeal_center YFB_stipe_shell 0.000613 yes
Pileal_Stipeal_center YFB_stipe_skin 0.296601 no
Pileal_Stipeal_center YFB_cap_skin 0.726746 no
Pileal_Stipeal_center YFB_cap_tissue 0.000613 yes
Pileal_Stipeal_center YFB_gill_tissue 0.033444 yes
Pileal_Stipeal_center YFB_veil 0.197709 no
Pileal_Stipeal_center Pileal_Stipeal_shell 0.033906 yes
Pileal_Stipeal_center DIF_stipe_center 0.000613 yes
Pileal_Stipeal_center DIF_stipe_shell 0.004548 yes
Pileal_Stipeal_center DIF_stipe_skin 0.801838 no
Pileal_Stipeal_center DIF_cap_skin 0.181205 no
Pileal_Stipeal_center DIF_cap_tissue 0.000613 yes
Pileal_Stipeal_shell DIF_gill_tissue 0.000613 yes
Pileal_Stipeal_shell YFB_stipe_center 0.509581 no
Pileal_Stipeal_shell YFB_stipe_shell 0.000613 yes
Pileal_Stipeal_shell YFB_stipe_skin 0.447336 no
Pileal_Stipeal_shell YFB_cap_skin 0.113185 no
Pileal_Stipeal_shell YFB_cap_tissue 0.000613 yes
Pileal_Stipeal_shell YFB_gill_tissue 0.000613 yes
Pileal_Stipeal_shell YFB_veil 0.675495 no
Pileal_Stipeal_shell DIF_stipe_center 0.269471 no
Pileal_Stipeal_shell DIF_stipe_shell 0.697604 no
Pileal_Stipeal_shell DIF_stipe_skin 0.005302 yes
Pileal_Stipeal_shell DIF_cap_skin 0.639683 no
Pileal_Stipeal_shell DIF_cap_tissue 0.065649 no
DIF_stipe_center DIF_gill_tissue 0.027205 yes
DIF_stipe_center YFB_stipe_center 0.038047 yes
DIF_stipe_center YFB_stipe_shell 0.109462 no
DIF_stipe_center YFB_stipe_skin 0.023153 yes
DIF_stipe_center YFB_cap_skin 0.000613 yes
DIF_stipe_center YFB_cap_tissue 0.000613 yes
DIF_stipe_center YFB_gill_tissue 0.000613 yes
DIF_stipe_center YFB_veil 0.078769 no
DIF_stipe_center DIF_stipe_shell 0.633537 no
DIF_stipe_center DIF_stipe_skin 0.000613 yes
DIF_stipe_center DIF_cap_skin 0.059318 no
DIF_stipe_center DIF_cap_tissue 0.660498 no
DIF_stipe_shell DIF_gill_tissue 0.001625 yes
DIF_stipe_shell YFB_stipe_center 0.193505 no
DIF_stipe_shell YFB_stipe_shell 0.012880 yes
DIF_stipe_shell YFB_stipe_skin 0.148649 no
DIF_stipe_shell YFB_cap_skin 0.022111 yes
DIF_stipe_shell YFB_cap_tissue 0.000613 yes
DIF_stipe_shell YFB_gill_tissue 0.000613 yes
DIF_stipe_shell YFB_veil 0.318509 no
DIF_stipe_shell DIF_stipe_skin 0.000613 yes
DIF_stipe_shell DIF_cap_skin 0.269471 no
DIF_stipe_shell DIF_cap_tissue 0.237227 no
DIF_stipe_skin DIF_gill_tissue 0.000613 yes
DIF_stipe_skin YFB_stipe_center 0.112109 no
DIF_stipe_skin YFB_stipe_shell 0.000613 yes
DIF_stipe_skin YFB_stipe_skin 0.115041 no
DIF_stipe_skin YFB_cap_skin 0.435715 no
DIF_stipe_skin YFB_cap_tissue 0.000613 yes
DIF_stipe_skin YFB_gill_tissue 0.078944 no
DIF_stipe_skin YFB_veil 0.070499 no
DIF_stipe_skin DIF_cap_skin 0.061473 no
DIF_stipe_skin DIF_cap_tissue 0.000613 yes
DIF_cap_skin DIF_gill_tissue 0.000613 yes
DIF_cap_skin YFB_stipe_center 0.924431 no
DIF_cap_skin YFB_stipe_shell 0.000613 yes
DIF_cap_skin YFB_stipe_skin 0.888180 no
DIF_cap_skin YFB_cap_skin 0.446490 no
DIF_cap_skin YFB_cap_tissue 0.000613 yes
DIF_cap_skin YFB_gill_tissue 0.000613 yes
DIF_cap_skin YFB_veil 0.989210 no
DIF_cap_skin DIF_cap_tissue 0.008791 yes
DIF_cap_tissue DIF_gill_tissue 0.153005 no
DIF_cap_tissue YFB_stipe_center 0.004928 yes
DIF_cap_tissue YFB_stipe_shell 0.427784 no
DIF_cap_tissue YFB_stipe_skin 0.002525 yes
DIF_cap_tissue YFB_cap_skin 0.000613 yes
DIF_cap_tissue YFB_cap_tissue 0.000613 yes
DIF_cap_tissue YFB_gill_tissue 0.000613 yes
DIF_cap_tissue YFB_veil 0.014668 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|105860
MAPYFLRNIIPKREQRKQARPLLEVLAGLTWIQWAHFFCGWLAWTCDAIDFFSVSLSVNRLTVQFGRDVHDITTA
ITLTLLLRSVGALIFGMLSDRFGRKWPLVANLVLVAVLELGAGFVQTFQQFLVLRSLFGIGMGGIWGLAASTSLE
NLPVEARGLASGVLQQGYAVGYLLAAVINLRLVPATATTWRTLFWTASGISLFAAGIRALLPESEVFIRAKAAEK
ARGVNTGKKTKIFLRELKEMMKAHWLLCIYAVLLMTGFNFLSHGSQDLYPTYVETTKGLTSSDATIATIIGNCGA
VAGGLVAGMISQYIGRRLTIVIFVLLIAVFIPLWILPSTFGALAAGAFCIQFGVQGAWGVIPIQLSEMSPPAFRA
TFPGVAYQIGNMVSSASAQIEATAGEHLRTTVISNGQPKDVPDYATVQGILIGVVCAFVIVVTVLGPENHGSHFE
KAKTAFEEGGGRGEFVDDGSEGRQRDEDSSRPGSINEKDIQGTDMKA*
Coding >AgabiH97|105860
ATGGCGCCTTACTTCCTGCGCAATATTATTCCGAAGCGGGAACAACGCAAACAAGCTAGGCCTCTTCTTGAAGTA
TTAGCTGGCCTCACTTGGATTCAGTGGGCGCACTTTTTCTGTGGGTGGTTGGCTTGGACTTGCGATGCCATCGAC
TTCTTCTCGGTATCGCTCAGTGTCAATCGATTGACTGTGCAGTTTGGAAGGGATGTTCACGATATTACGACAGCT
ATCACACTTACTCTTCTTTTACGATCGGTCGGGGCTCTTATCTTTGGTATGCTCTCAGATAGATTTGGTCGTAAA
TGGCCTCTAGTTGCCAACCTCGTCCTCGTTGCGGTGCTCGAACTTGGGGCCGGCTTCGTCCAAACATTCCAACAA
TTCCTTGTCCTTAGATCCCTTTTCGGTATCGGAATGGGTGGCATTTGGGGTCTCGCTGCGTCCACTTCGTTAGAA
AATCTTCCTGTCGAAGCTCGCGGTTTGGCGTCTGGCGTCCTCCAGCAGGGATATGCAGTCGGTTACCTCTTAGCC
GCCGTTATCAACTTGCGCCTTGTTCCAGCAACCGCAACAACATGGAGGACTTTGTTTTGGACCGCTTCCGGGATC
TCGCTCTTTGCAGCCGGTATCCGCGCTCTACTTCCAGAATCGGAAGTCTTTATCCGTGCCAAGGCCGCCGAGAAA
GCTCGTGGAGTTAATACTGGGAAGAAGACGAAGATCTTCTTGCGTGAATTGAAAGAGATGATGAAGGCTCATTGG
CTATTGTGTATCTATGCCGTTCTTCTTATGACTGGTTTCAATTTCCTTTCGCACGGTTCTCAGGATCTTTATCCC
ACGTACGTTGAAACCACAAAGGGTTTGACTTCCTCCGATGCTACTATTGCCACTATTATTGGAAACTGTGGTGCT
GTCGCCGGTGGATTAGTGGCTGGAATGATCAGCCAGTATATTGGAAGGCGTTTGACAATTGTTATTTTCGTGTTG
CTTATTGCAGTATTCATCCCCCTATGGATCCTTCCGAGCACGTTCGGTGCCCTAGCCGCAGGTGCCTTCTGTATC
CAATTCGGTGTTCAAGGTGCATGGGGTGTTATTCCCATTCAACTCTCTGAAATGTCGCCCCCGGCTTTCCGTGCG
ACGTTCCCTGGTGTGGCATACCAAATCGGTAATATGGTTTCTTCTGCGTCCGCACAAATCGAAGCTACTGCTGGT
GAACATCTACGAACTACCGTCATCTCGAATGGGCAGCCTAAAGATGTTCCGGATTACGCTACTGTGCAAGGTATC
CTTATCGGTGTCGTTTGTGCCTTTGTCATTGTCGTAACTGTTCTCGGGCCCGAGAACCATGGATCTCACTTTGAG
AAAGCTAAGACCGCCTTTGAAGAAGGTGGAGGTCGTGGTGAATTCGTTGATGACGGTTCAGAAGGAAGGCAACGT
GACGAGGATTCGTCGCGGCCTGGATCTATCAATGAAAAGGATATACAAGGCACCGATATGAAGGCATAA
Transcript >AgabiH97|105860
ATGGCGCCTTACTTCCTGCGCAATATTATTCCGAAGCGGGAACAACGCAAACAAGCTAGGCCTCTTCTTGAAGTA
TTAGCTGGCCTCACTTGGATTCAGTGGGCGCACTTTTTCTGTGGGTGGTTGGCTTGGACTTGCGATGCCATCGAC
TTCTTCTCGGTATCGCTCAGTGTCAATCGATTGACTGTGCAGTTTGGAAGGGATGTTCACGATATTACGACAGCT
ATCACACTTACTCTTCTTTTACGATCGGTCGGGGCTCTTATCTTTGGTATGCTCTCAGATAGATTTGGTCGTAAA
TGGCCTCTAGTTGCCAACCTCGTCCTCGTTGCGGTGCTCGAACTTGGGGCCGGCTTCGTCCAAACATTCCAACAA
TTCCTTGTCCTTAGATCCCTTTTCGGTATCGGAATGGGTGGCATTTGGGGTCTCGCTGCGTCCACTTCGTTAGAA
AATCTTCCTGTCGAAGCTCGCGGTTTGGCGTCTGGCGTCCTCCAGCAGGGATATGCAGTCGGTTACCTCTTAGCC
GCCGTTATCAACTTGCGCCTTGTTCCAGCAACCGCAACAACATGGAGGACTTTGTTTTGGACCGCTTCCGGGATC
TCGCTCTTTGCAGCCGGTATCCGCGCTCTACTTCCAGAATCGGAAGTCTTTATCCGTGCCAAGGCCGCCGAGAAA
GCTCGTGGAGTTAATACTGGGAAGAAGACGAAGATCTTCTTGCGTGAATTGAAAGAGATGATGAAGGCTCATTGG
CTATTGTGTATCTATGCCGTTCTTCTTATGACTGGTTTCAATTTCCTTTCGCACGGTTCTCAGGATCTTTATCCC
ACGTACGTTGAAACCACAAAGGGTTTGACTTCCTCCGATGCTACTATTGCCACTATTATTGGAAACTGTGGTGCT
GTCGCCGGTGGATTAGTGGCTGGAATGATCAGCCAGTATATTGGAAGGCGTTTGACAATTGTTATTTTCGTGTTG
CTTATTGCAGTATTCATCCCCCTATGGATCCTTCCGAGCACGTTCGGTGCCCTAGCCGCAGGTGCCTTCTGTATC
CAATTCGGTGTTCAAGGTGCATGGGGTGTTATTCCCATTCAACTCTCTGAAATGTCGCCCCCGGCTTTCCGTGCG
ACGTTCCCTGGTGTGGCATACCAAATCGGTAATATGGTTTCTTCTGCGTCCGCACAAATCGAAGCTACTGCTGGT
GAACATCTACGAACTACCGTCATCTCGAATGGGCAGCCTAAAGATGTTCCGGATTACGCTACTGTGCAAGGTATC
CTTATCGGTGTCGTTTGTGCCTTTGTCATTGTCGTAACTGTTCTCGGGCCCGAGAACCATGGATCTCACTTTGAG
AAAGCTAAGACCGCCTTTGAAGAAGGTGGAGGTCGTGGTGAATTCGTTGATGACGGTTCAGAAGGAAGGCAACGT
GACGAGGATTCGTCGCGGCCTGGATCTATCAATGAAAAGGATATACAAGGCACCGATATGAAGGCATAA
Gene >AgabiH97|105860
ATGGCGCCTTACTTCCTGCGCAATATTATTCCGAAGCGGGAACAACGCAAACAAGCTAGGCCTCTTCTTGAAGTA
TTAGCTGGCCTCACTTGGATTCAGTGGGCGCACTTTTTCTGTGGGTGAGTACGTTGTTTGTGGCGTTGAATGTGC
TTGGCGTGAGCGATCGGCCGGGGCCCCGCCTTTTCTCCTTTTTGGTGGTTGACTCTCACGACTAATCCGCTTATC
CCCCAAGGTGGTTGGCTTGGACTTGCGATGCCATCGACTTCTTCTCGGTATCGCTCAGTGTCAATCGATTGACTG
TGCAGTTTGGAAGGGATGTTCACGATATTGTATGTACTTTGCTGGATTCTGGACTGAATAGGAGTTCATCCAATA
TCGACAGACGACAGCTATCACACTTACTCTTCTTTTACGATCGGTCGGGGCTGTAAGTCGTTCCGTGTCTCCGCT
GTTGCAAAACTGATCAAGTTCTCCAGCTTATCTTTGGTATGCTCTCAGATAGATTTGGTCGTAAATGGCCTCTAG
TTGCCAACCTCGTCCTCGTTGCGGTGCTCGAACTTGGGGCCGGCTTCGTCCAAACATTCCAACAATTCCTTGTCC
TTAGATCCCTTTTCGGTATCGGAATGGGTGGCATTTGGGGTCTCGCTGCGTCCACTTCGTTAGAAAATCTTCCTG
TCGAAGCTCGCGGTTTGGCGTCTGGCGTCCTCCAGCAGGGATATGCAGTCGGTTACCTCTTAGCCGCCGTTATCA
ACTTGCGCCTTGTTCCAGCAACCGCAACAACATGGAGGACTTTGTTTTGGACCGCTTCCGGGATCTCGCTCTTTG
CAGCCGGTATCCGCGCTCTACTTCCAGAATCGGAAGTCTTTATCCGTGCCAAGGCCGCCGAGAAAGCTCGTGGAG
TTAATACTGGGAAGAAGACGAAGATCTTCTTGCGTGAATTGAAAGAGATGATGAAGGCTCATTGGCTATTGTGTA
TCTATGCCGTTCTTCTTATGACTGGTACGCCCATCCTATTTTTGCCGATAGCACTCTGCTAACGCCGGCCCATCT
CGGCACCAAGGTTTCAATTTCCTTTCGCACGGTTCTCAGGTACGATCTGCCCCGCATTCGCTTACATGGTCATTG
GTTCTGACCCACATCATTTTTTCCAATAGGATCTTTATCCCACGTACGTTGAAACCACAAAGGGTTTGACTTCCT
CCGATGCTACTATTGCCACTATTATTGGAAACTGTGTAAGTGCAATCAGATCTCCCGAGTCACATTGTCTGAAAT
GTACTTTTACTTATGCTAGGGTGCTGTCGCGTGAGTTTTTTAAACAGAAAAGTGCCAAGCTTGAAAAAACTGATT
GGAGGTTGTCTTCTCACGTAGCGGTGGATTAGTGGCTGGAATGATCAGCCAGTATATTGGAAGGCGTTTGACAAT
TGTGTGAGTATCCTATCTTGGGTTTCTGTTGGTTTTTTTGGCGTGTATAATCAAACTGACGGTGCTTTGTGGACT
AGTATTTTCGTGTTGCTTATTGCAGGTGCGTCCGTTCATATTCCCATGAACTATACTATACCGAGCGTATATCAG
TATTCATCCCCCTATGGATCCTTCCGAGCACGTTCGGTGCCCTAGCCGCAGGTGCCTTCTGTATCCAATTCGGTG
TTCAAGGTGCATGGGGTGTTGTGAGTTCCATCTGAAAGTCATTTACAAGCACAGTAAACCTAAAAAATCGACTGA
TAGATTCCCATTCAACTCTCTGAAATGTCGCCCCCGGCTTTCCGTGCGACGTTCCCTGGTGTGGCATACCAAATC
GGTAATGTTAGTATCATCACGTACCTCAAGTATGAGACGTTACTGATTCTTGCATTAGATGGTTTCTTCTGCGTC
CGCACAAATCGAAGCTAGTGAGTTCGTTCAAGCTCCCGCCCTGAATTTGGCGCTGATAGTGGTTATCAGCTGCTG
GTGAACATCTACGAACTACCGTCATCTCGAATGGGCAGCCTAAAGATGTTCCGGATTACGCTACTGTGAGTCTTT
ACCCGTCCTCGTTTTTGTAGAACGTTTGGGTATGAACGAATGAATTATAGGTGCAAGGTATCCTTATCGGTGTCG
TTTGTGCCTTTGTCATTGTCGTAACTGTTCTCGGGCCCGAGTACGTCCTTTTCTACTTGCATTCTATAAATTTCA
TGACGACTCAATAATTATCCATTGATGTTTTATAGGAACCATGGATCTCACTTTGAGAAAGCTAAGACCGCCTTT
GAAGAAGGTGGAGGTCGTGGTGAATTCGTTGATGACGGTTCAGAAGGAAGGCAACGTGACGAGGATTCGTCGCGG
CCTGGATCTATCAATGAAAAGGATATACAAGGCACCGATATGAAGGCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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