© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | AgabiH97|105620 |
| Gene name | |
| Location | scaffold_7:2161876..2162644 |
| Strand | - |
| Gene length (bp) | 768 |
| Transcript length (bp) | 570 |
| Coding sequence length (bp) | 570 |
| Protein length (aa) | 190 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1404 | 0.0955 | 0.7885 | 0.112 | 0.0554 | 0.0222 | 0.3156 | 0.3529 | 0.1268 | 0.0026 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 26 | 0.993507 |
| Orthofinder run ID | 1 |
| Orthogroup | 9681 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Agaricus bisporus var bisporus H39 | AgabiH39|411100 |
| Agaricus bisporus var bisporus H97 | AgabiH97|105620 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|105620 MMFHTLHRISSITTILLSITIAKSLATRHYEILNNCPQAIQIYINGESQGYIDAQTAISHNYQDDFSGFIYSDAN GGVVDDASANGTTSIGTTRAAFKGTDNYYYILSDKLNTGISIVPVSVNLAGNKENGFCVPIFCDMNSCPHSTDKP ITHFPQHHDHDHPPQSPLFECPDKNTGYVVTFCPSGVFP* |
| Coding | >AgabiH97|105620 ATGATGTTCCACACTTTACATCGAATCTCCTCCATCACCACCATCCTCCTCTCCATCACCATTGCCAAAAGTCTA GCCACTCGCCACTACGAAATCCTCAACAATTGCCCACAAGCCATTCAAATCTACATCAACGGTGAAAGTCAAGGT TACATCGACGCCCAAACGGCGATTAGCCATAATTATCAAGATGATTTTAGTGGATTTATCTATTCTGATGCGAAT GGAGGTGTGGTAGATGATGCTAGTGCGAATGGTACTACTAGTATTGGTACTACTCGCGCTGCGTTCAAGGGCACG GATAATTATTACTACATTCTATCGGACAAATTGAACACTGGAATCAGTATCGTCCCAGTCTCTGTCAACTTGGCG GGTAATAAAGAAAATGGTTTCTGCGTCCCCATTTTCTGCGACATGAATTCTTGTCCACATTCAACTGATAAACCT ATAACTCACTTCCCTCAACATCATGATCATGATCACCCACCCCAATCGCCTCTATTCGAATGTCCTGACAAAAAC ACTGGTTATGTCGTAACGTTCTGCCCTTCAGGAGTGTTTCCCTAA |
| Transcript | >AgabiH97|105620 ATGATGTTCCACACTTTACATCGAATCTCCTCCATCACCACCATCCTCCTCTCCATCACCATTGCCAAAAGTCTA GCCACTCGCCACTACGAAATCCTCAACAATTGCCCACAAGCCATTCAAATCTACATCAACGGTGAAAGTCAAGGT TACATCGACGCCCAAACGGCGATTAGCCATAATTATCAAGATGATTTTAGTGGATTTATCTATTCTGATGCGAAT GGAGGTGTGGTAGATGATGCTAGTGCGAATGGTACTACTAGTATTGGTACTACTCGCGCTGCGTTCAAGGGCACG GATAATTATTACTACATTCTATCGGACAAATTGAACACTGGAATCAGTATCGTCCCAGTCTCTGTCAACTTGGCG GGTAATAAAGAAAATGGTTTCTGCGTCCCCATTTTCTGCGACATGAATTCTTGTCCACATTCAACTGATAAACCT ATAACTCACTTCCCTCAACATCATGATCATGATCACCCACCCCAATCGCCTCTATTCGAATGTCCTGACAAAAAC ACTGGTTATGTCGTAACGTTCTGCCCTTCAGGAGTGTTTCCCTAA |
| Gene | >AgabiH97|105620 ATGATGTTCCACACTTTACATCGAATCTCCTCCATCACCACCATCCTCCTCTCCATCACCATTGCCAAAAGTCTA GCCACTCGCCACTACGAAATCCTCAACAATTGCCCACAAGCCATTCAAATCTACATCAACGGTGAAAGTCAAGGT TACATCGACGCCCAAACGGCGATTAGCCATAATTATCAAGATGATTTTAGTGGATTTATCTATTCTGATGCGAAT GGAGGTGTGGTAGATGATGCTAGTGCGAATGGTACTACTAGTATTGGTACTACTCGCGCTGCGTTCAAGGGCACG GTGCGTTCATTTCAAAGCTTTGGATTGATAGACCCTCGTGGTATTGTATTGACTTCCTCTACTAATTATTAGGAT AATTATTACTACATTCTATCGGACAAATTGAACACTGGAATCAGTATCGTCCCAGTCTCTGTCAACTTGGCGGGT AATAAAGTAAGTTACAACACTTGATATCACAGGGGTAAAGACCAACATACTATGTTTTCTCTCATCTAGGAAAAT GGTTTCTGCGTCCCCATTTTCTGCGACATGAATTCTTGTCCACATTCAACTGATAAACCTATAACTCACTTCCCT CAACATCATGATCATGATCACCCACCCCAATCGCCTCTATTCGAATGTCCTGACAAAAACACTGGTTATGTCGTA ACGTACGTGAAACTGTTTCTTCAAACTTGCCGAATCCATTTATCCGTTCCATTTTTTTTTATTAGGTTCTGCCCT TCAGGAGTGTTTCCCTAA |