Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|105240
Gene name
Locationscaffold_7:2048405..2049621
Strand+
Gene length (bp)1216
Transcript length (bp)1008
Coding sequence length (bp)1008
Protein length (aa) 336

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00096 zf-C2H2 Zinc finger, C2H2 type 9.0E-04 22 44

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q03081|MET31_YEAST Transcriptional regulator MET31 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MET31 PE=1 SV=1 22 69 3.0E-06
sp|P17022|ZNF18_HUMAN Zinc finger protein 18 OS=Homo sapiens GN=ZNF18 PE=1 SV=2 22 68 3.0E-06
sp|Q6KAS7|ZN521_MOUSE Zinc finger protein 521 OS=Mus musculus GN=Znf521 PE=1 SV=2 5 68 6.0E-06
sp|Q68EA5|ZNF57_HUMAN Zinc finger protein 57 OS=Homo sapiens GN=ZNF57 PE=2 SV=3 13 93 6.0E-06
sp|Q96K83|ZN521_HUMAN Zinc finger protein 521 OS=Homo sapiens GN=ZNF521 PE=1 SV=1 5 68 6.0E-06
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q03081|MET31_YEAST Transcriptional regulator MET31 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MET31 PE=1 SV=1 22 69 3.0E-06
sp|P17022|ZNF18_HUMAN Zinc finger protein 18 OS=Homo sapiens GN=ZNF18 PE=1 SV=2 22 68 3.0E-06
sp|Q6KAS7|ZN521_MOUSE Zinc finger protein 521 OS=Mus musculus GN=Znf521 PE=1 SV=2 5 68 6.0E-06
sp|Q68EA5|ZNF57_HUMAN Zinc finger protein 57 OS=Homo sapiens GN=ZNF57 PE=2 SV=3 13 93 6.0E-06
sp|Q96K83|ZN521_HUMAN Zinc finger protein 521 OS=Homo sapiens GN=ZNF521 PE=1 SV=1 5 68 6.0E-06
sp|Q6NUD7|ZN521_XENLA Zinc finger protein 521 OS=Xenopus laevis GN=znf521 PE=2 SV=1 5 68 8.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
C2H2 zinc finger

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|105240
MHSIHKDASIDSLRRNATDGAYHCPRCDAPFTRRSNLRRHYHIHTRNMVHKCQHCNQSFAKSEELHSHSVQCGAT
TWDQSTDRMIQAMTQYTPDTGLSHNIEFAGGLGIVGTPIHEHPPGLSDDFINVDLFQQTDPLKADQATHEFQDFF
SSISSALSESASSPSTSSEILSASAVSFPFPYPSHTPGTASTNSSNKSSPSPPSTIFSSGSYSFGVSPEERANSI
SRWNSYNMMMSLNEANAGEKPMYTQKQVEDMLDMVGNCFLDTIDAVLQRAQAVDLPLVGQEISELQTLVEPQQNS
LSVEARRMILVETIPRLMSCLRDDRYGANRPVISP*
Coding >AgabiH97|105240
ATGCATTCGATCCACAAAGACGCAAGCATCGACAGTCTCCGGCGAAATGCCACTGATGGAGCCTATCATTGCCCT
CGCTGCGATGCTCCCTTCACAAGGCGATCAAACCTAAGGCGGCACTACCACATTCACACTCGTAACATGGTACAT
AAGTGCCAGCACTGTAATCAGAGTTTCGCAAAGAGCGAAGAACTACATTCTCATTCTGTGCAATGTGGGGCTACG
ACTTGGGACCAATCAACAGACCGCATGATCCAAGCCATGACCCAATATACGCCCGATACTGGCCTTTCACATAAC
ATTGAATTCGCGGGAGGTTTAGGCATAGTCGGTACTCCCATCCACGAACATCCACCAGGCTTGTCGGATGACTTC
ATTAATGTCGACCTCTTCCAACAAACCGACCCATTGAAGGCCGATCAAGCGACGCACGAATTCCAAGACTTCTTC
TCCTCCATCTCATCAGCTCTGTCTGAAAGTGCGTCTTCGCCTTCAACTTCGTCGGAGATACTGTCGGCGTCTGCA
GTATCTTTCCCATTCCCATACCCCTCGCACACACCCGGGACAGCAAGCACCAATTCGTCGAATAAATCGTCACCA
TCTCCTCCGTCGACGATATTCTCCAGTGGCTCCTATTCCTTTGGTGTCTCTCCAGAAGAGAGGGCGAATTCCATT
TCACGATGGAACTCATATAACATGATGATGTCATTGAATGAAGCCAATGCTGGCGAGAAACCAATGTACACGCAA
AAACAAGTAGAGGATATGTTGGATATGGTTGGGAACTGTTTTCTCGACACTATAGATGCCGTTCTACAGCGAGCA
CAGGCCGTTGATCTGCCCTTGGTAGGGCAAGAAATCAGTGAATTGCAAACCCTGGTAGAACCACAGCAGAATTCC
CTGAGTGTCGAAGCTCGAAGAATGATTCTCGTGGAAACGATCCCGCGCTTGATGTCGTGTCTCAGGGACGATAGA
TACGGCGCAAACCGGCCTGTTATTTCCCCATGA
Transcript >AgabiH97|105240
ATGCATTCGATCCACAAAGACGCAAGCATCGACAGTCTCCGGCGAAATGCCACTGATGGAGCCTATCATTGCCCT
CGCTGCGATGCTCCCTTCACAAGGCGATCAAACCTAAGGCGGCACTACCACATTCACACTCGTAACATGGTACAT
AAGTGCCAGCACTGTAATCAGAGTTTCGCAAAGAGCGAAGAACTACATTCTCATTCTGTGCAATGTGGGGCTACG
ACTTGGGACCAATCAACAGACCGCATGATCCAAGCCATGACCCAATATACGCCCGATACTGGCCTTTCACATAAC
ATTGAATTCGCGGGAGGTTTAGGCATAGTCGGTACTCCCATCCACGAACATCCACCAGGCTTGTCGGATGACTTC
ATTAATGTCGACCTCTTCCAACAAACCGACCCATTGAAGGCCGATCAAGCGACGCACGAATTCCAAGACTTCTTC
TCCTCCATCTCATCAGCTCTGTCTGAAAGTGCGTCTTCGCCTTCAACTTCGTCGGAGATACTGTCGGCGTCTGCA
GTATCTTTCCCATTCCCATACCCCTCGCACACACCCGGGACAGCAAGCACCAATTCGTCGAATAAATCGTCACCA
TCTCCTCCGTCGACGATATTCTCCAGTGGCTCCTATTCCTTTGGTGTCTCTCCAGAAGAGAGGGCGAATTCCATT
TCACGATGGAACTCATATAACATGATGATGTCATTGAATGAAGCCAATGCTGGCGAGAAACCAATGTACACGCAA
AAACAAGTAGAGGATATGTTGGATATGGTTGGGAACTGTTTTCTCGACACTATAGATGCCGTTCTACAGCGAGCA
CAGGCCGTTGATCTGCCCTTGGTAGGGCAAGAAATCAGTGAATTGCAAACCCTGGTAGAACCACAGCAGAATTCC
CTGAGTGTCGAAGCTCGAAGAATGATTCTCGTGGAAACGATCCCGCGCTTGATGTCGTGTCTCAGGGACGATAGA
TACGGCGCAAACCGGCCTGTTATTTCCCCATGA
Gene >AgabiH97|105240
ATGCATTCGATCCACAAAGACGCAAGCATCGACAGTCTCCGGCGAAATGCCACTGATGGAGCCTATCATTGCCCT
CGCTGCGATGCTCCCTTCACAAGGCGATCAAACCTAAGGCGGCACTACCACATTCGTGAGCATGTCCCACTCTTG
CCCTCCGAGTACCTTACCGAATGCCTCCCCTAGACACTCGTAACATGGTACATAAGTGCCAGCACTGTAATCAGA
GTTTCGCAAAGAGGTGAGTTTCGCTGGTTCCTCGTTGCTGTCATCCCCTCATTCCGTATCCAGCGAAGAACTACA
TTCTCATTCTGTGCAATGTGGGGCTACGACTTGGGACCAATCAACAGACCGCATGATCCAAGCCATGACCCAATA
TACGCCCGATACTGGCCTTTCACATAACATTGAATTCGCGGGAGGTTTAGGCATAGTCGGTACTCCCATCCACGA
ACATCCACCAGGCTTGTCGGATGACTTCATTAATGTCGACCTCTTCCAACAAACCGACCCATTGAAGGCCGATCA
AGCGACGCACGAATTCCAAGACTTCTTCTCCTCCATCTCATCAGCTCTGTCTGAAAGTGCGTCTTCGCCTTCAAC
TTCGTCGGAGATACTGTCGGCGTCTGCAGTATCTTTCCCATTCCCATACCCCTCGCACACACCCGGGACAGCAAG
CACCAATTCGTCGAATGTAAGTAGCACAAACTCCGTTCTATTGAACTTGTGTGCTGACTCCATTCTCCAGAAATC
GTCACCATCTCCTCCGTCGACGATATTCTCCAGTGGCTCCTATTCCTTTGGTGTCTCTCCAGAAGAGAGGGCGAA
TTCCATTTCACGATGGAACTCATATAACATGATGATGTCATTGAATGAAGCCAATGCTGGCGAGAAACCAATGTA
CACGCAAAAACAAGTAGAGGATATGTTGGATATGGTTGGGAACTGTTTTCTCGACACTATAGTGAGTTATCTCTT
CTAGCAGGCACGAACACTTGTTGATGTATTTGCGCAGGATGCCGTTCTACAGCGAGCACAGGCCGTTGATCTGCC
CTTGGTAGGGCAAGAAATCAGTGAATTGCAAACCCTGGTAGAACCACAGCAGAATTCCCTGAGTGTCGAAGCTCG
AAGAATGATTCTCGTGGAAACGATCCCGCGCTTGATGTCGTGTCTCAGGGACGATAGATACGGCGCAAACCGGCC
TGTTATTTCCCCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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