Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|104670
Gene name
Location	scaffold_7:1900503..1901891
Strand	-
Gene length (bp)	1388
Transcript length (bp)	945
Coding sequence length (bp)	945
Protein length (aa)	315

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 22	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|104670 MRSNAFLLPSVVLIASTPSLCDFPACRSCGSEETLVAWVKRSERNVPPLGYGIPTSNGGSMLTKIPVTYPMGQGE PLNIIISGNSDSRVLVDSPSDGGLQNYFQSLGFSGECLGQRESVHQAANLGDGHDFKNETAVIRWNYGDPELGAC KETIQGGNHFRYWIQDGPQVNSGAIFLAASYEKPIAQQHDIIPNGYNLGRDWLVGNITQSSIPTLNLTNGTTYSG STSSEGYTYKTDISYLSGYLEDTNYGINHNISVGVDGINSVDGLVAVFDVDITQVPPNTSAAWRPSLVSLWHLSC YSFLISFFSFELLS*
Coding	>AgabiH97\|104670 ATGCGCTCAAATGCTTTTCTACTGCCATCTGTTGTGCTAATAGCCTCTACACCCTCGTTATGTGATTTTCCAGCT TGCCGGAGTTGTGGCTCAGAGGAGACGCTTGTTGCTTGGGTTAAACGCTCAGAGCGCAACGTGCCACCCTTAGGA TATGGGATTCCGACATCTAATGGAGGGAGTATGCTGACGAAAATTCCAGTGACTTATCCAATGGGGCAAGGGGAG CCTCTAAACATCATCATCAGTGGTAACTCGGACTCCCGTGTGCTAGTCGACTCTCCGAGTGACGGTGGACTTCAG AATTATTTTCAGTCACTAGGCTTTTCTGGTGAATGCCTCGGTCAACGTGAAAGTGTGCACCAAGCTGCTAACCTC GGAGATGGGCATGACTTCAAGAATGAAACTGCCGTTATCAGGTGGAATTACGGTGATCCAGAGTTAGGCGCGTGT AAGGAGACCATTCAGGGGGGGAATCATTTCCGGTATTGGATACAGGACGGTCCTCAAGTCAACAGTGGCGCGATA TTTCTGGCCGCATCATATGAAAAACCAATTGCTCAACAACATGACATCATTCCTAATGGATACAATTTGGGCCGG GATTGGCTAGTGGGCAATATCACCCAGTCGTCAATACCTACCCTCAATCTCACAAACGGCACAACATATTCCGGG TCTACCTCATCCGAAGGGTATACATATAAAACCGACATCTCATACCTTTCCGGTTACCTCGAAGACACGAATTAT GGTATCAACCATAATATCAGTGTTGGAGTTGACGGAATCAACTCAGTGGATGGATTAGTTGCAGTGTTCGATGTT GATATAACTCAAGTTCCACCCAACACATCAGCTGCGTGGCGTCCGTCACTAGTTTCGCTATGGCATCTGTCATGT TACAGTTTTCTGATATCCTTCTTTTCATTTGAACTGTTATCGTAG
Transcript	>AgabiH97\|104670 ATGCGCTCAAATGCTTTTCTACTGCCATCTGTTGTGCTAATAGCCTCTACACCCTCGTTATGTGATTTTCCAGCT TGCCGGAGTTGTGGCTCAGAGGAGACGCTTGTTGCTTGGGTTAAACGCTCAGAGCGCAACGTGCCACCCTTAGGA TATGGGATTCCGACATCTAATGGAGGGAGTATGCTGACGAAAATTCCAGTGACTTATCCAATGGGGCAAGGGGAG CCTCTAAACATCATCATCAGTGGTAACTCGGACTCCCGTGTGCTAGTCGACTCTCCGAGTGACGGTGGACTTCAG AATTATTTTCAGTCACTAGGCTTTTCTGGTGAATGCCTCGGTCAACGTGAAAGTGTGCACCAAGCTGCTAACCTC GGAGATGGGCATGACTTCAAGAATGAAACTGCCGTTATCAGGTGGAATTACGGTGATCCAGAGTTAGGCGCGTGT AAGGAGACCATTCAGGGGGGGAATCATTTCCGGTATTGGATACAGGACGGTCCTCAAGTCAACAGTGGCGCGATA TTTCTGGCCGCATCATATGAAAAACCAATTGCTCAACAACATGACATCATTCCTAATGGATACAATTTGGGCCGG GATTGGCTAGTGGGCAATATCACCCAGTCGTCAATACCTACCCTCAATCTCACAAACGGCACAACATATTCCGGG TCTACCTCATCCGAAGGGTATACATATAAAACCGACATCTCATACCTTTCCGGTTACCTCGAAGACACGAATTAT GGTATCAACCATAATATCAGTGTTGGAGTTGACGGAATCAACTCAGTGGATGGATTAGTTGCAGTGTTCGATGTT GATATAACTCAAGTTCCACCCAACACATCAGCTGCGTGGCGTCCGTCACTAGTTTCGCTATGGCATCTGTCATGT TACAGTTTTCTGATATCCTTCTTTTCATTTGAACTGTTATCGTAG
Gene	>AgabiH97\|104670 ATGCGCTCAAATGCTTTTCTACTGCCATCTGTTGTGCTAATAGCCTCTACACCCTCGTTATGTGATTTTCCAGCT TGCCGGAGTTGTGGCTCAGAGGAGACGCTTGTTGCTTGGGTTAAACGCTCAGAGCGCAACGTGCCACCCTTAGGA TATGGGATTCCGACATCTAATGGAGGGAGTATGCTGACGGTACGTTGCTTGAACCCTGACAAGCGGGAACAGTAC ATTTATGCTACAAGATGCTTAGAAAATTCCAGTGACTTATCCAATGGGGCAAGGGGAGCCTCTAAACATCATCAT CAGTGGTAACTCGGACTCCCGTGTGCTAGTCGACTCTCCGAGTGACGGTGGACTTCAGAATTATTTTCAGTGCGC GCTTCTATCTATCATGTGTATCAATGGATGTCACAACTTATTCATCTCTTTCATCTTCAGGTCACTAGGCTTTTC TGGTGAATGCCTCGGTCAACGTGAAAGTGTGCACCAAGCTGCTAACCTCGGAGATGGGCATGACTTCAGTACGTG TGTTCTCAATACCGTTGAGATTCTTTTTGGGTCTAACGCGATTGACAAGAGAATGAAACTGCCGTTATCAGGTGG AATTACGGTGATCCAGAGTTAGGCGCGTGTAAGGAGACCATTCAGGGGGGGAATCATTTCCGGTATTGGATACAG GACGGTCCTCAAGTCAACAGGTATGTCTACCCCATATGAACTATTAAGCAAGAGAAGCTCACGTCAAAGCGGACG GTAATAGTGGCGCGATATTTCTGGCCGCATCATATGAAAAACCAATTGCTCGTAAGTGCATACTCATTTCACTCA CTACCTGATACCGGATGTGCTTATCCTGACTCTGTGATTGACAATAGAACAACATGACATCATTCCTAATGGATA CAATTTGGGCCGGTAAGTTATAACTTCTATCAACCTTTTTTCTGATGATTCTGATGATGCGACAATCACAGGGAT TGGCTAGTGGGCAATATCACCCAGTCGTCAATACCTACCCTCAATCTCACAAACGGCACAACATATTCCGGGTCT ACCTCATCCGAAGGGTATACATATAAAACCGACATCTCATACCTTTCCGGTTACCTCGAAGACACGAATTATGGT ATCAACCATAATATCAGTGTTGGAGTTGACGGAATCAACTCAGTGGATGGATTAGTTGCAGTGTTCGATGTTGAT ATAACTCAAGTTCCACCCAACACATCGTATGTTCATTTTCGTTCTTTCTTCTCTTTTTCACTGTGAGACTAACTC TGGCTCATTTGTTTGTCTTCAGAGCTGCGTGGCGTCCGTCACTAGTTTCGCTATGGCATCTGTCATGTTACAGTT TTCTGATATCCTTCTTTTCATTTGAACTGTTATCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail