© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|104530 |
| Gene name | |
| Location | scaffold_7:1860755..1863486 |
| Strand | + |
| Gene length (bp) | 2731 |
| Transcript length (bp) | 2271 |
| Coding sequence length (bp) | 2271 |
| Protein length (aa) | 757 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05964 | FYRN | F/Y-rich N-terminus | 5.4E-18 | 453 | 502 |
| PF05965 | FYRC | F/Y rich C-terminus | 7.2E-16 | 508 | 581 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q3UB74|TBRG1_MOUSE | Transforming growth factor beta regulator 1 OS=Mus musculus GN=Tbrg1 PE=1 SV=2 | 438 | 615 | 1.0E-26 |
| sp|Q5PQK8|TBRG1_RAT | Transforming growth factor beta regulator 1 OS=Rattus norvegicus GN=Tbrg1 PE=2 SV=2 | 438 | 615 | 7.0E-26 |
| sp|Q3YBR2|TBRG1_HUMAN | Transforming growth factor beta regulator 1 OS=Homo sapiens GN=TBRG1 PE=1 SV=1 | 438 | 585 | 2.0E-23 |
| sp|Q66IH2|TBRG1_XENTR | Transforming growth factor beta regulator 1 OS=Xenopus tropicalis GN=tbrg1 PE=2 SV=1 | 418 | 585 | 5.0E-22 |
| sp|Q8IRW8|TRR_DROME | Histone-lysine N-methyltransferase trr OS=Drosophila melanogaster GN=trr PE=1 SV=2 | 450 | 583 | 2.0E-15 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q3UB74|TBRG1_MOUSE | Transforming growth factor beta regulator 1 OS=Mus musculus GN=Tbrg1 PE=1 SV=2 | 438 | 615 | 1.0E-26 |
| sp|Q5PQK8|TBRG1_RAT | Transforming growth factor beta regulator 1 OS=Rattus norvegicus GN=Tbrg1 PE=2 SV=2 | 438 | 615 | 7.0E-26 |
| sp|Q3YBR2|TBRG1_HUMAN | Transforming growth factor beta regulator 1 OS=Homo sapiens GN=TBRG1 PE=1 SV=1 | 438 | 585 | 2.0E-23 |
| sp|Q66IH2|TBRG1_XENTR | Transforming growth factor beta regulator 1 OS=Xenopus tropicalis GN=tbrg1 PE=2 SV=1 | 418 | 585 | 5.0E-22 |
| sp|Q8IRW8|TRR_DROME | Histone-lysine N-methyltransferase trr OS=Drosophila melanogaster GN=trr PE=1 SV=2 | 450 | 583 | 2.0E-15 |
| sp|Q6PDK2|KMT2D_MOUSE | Histone-lysine N-methyltransferase 2D OS=Mus musculus GN=Kmt2d PE=1 SV=2 | 442 | 583 | 3.0E-08 |
| sp|O14686|KMT2D_HUMAN | Histone-lysine N-methyltransferase 2D OS=Homo sapiens GN=KMT2D PE=1 SV=2 | 442 | 583 | 3.0E-08 |
| sp|Q8NEZ4|KMT2C_HUMAN | Histone-lysine N-methyltransferase 2C OS=Homo sapiens GN=KMT2C PE=1 SV=3 | 450 | 583 | 8.0E-08 |
| sp|Q8BRH4|KMT2C_MOUSE | Histone-lysine N-methyltransferase 2C OS=Mus musculus GN=Kmt2c PE=1 SV=2 | 450 | 583 | 4.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005634 | nucleus | Yes |
| GO:0005575 | cellular_component | No |
| GO:0043229 | intracellular organelle | No |
| GO:0043231 | intracellular membrane-bounded organelle | No |
| GO:0043226 | organelle | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0043227 | membrane-bounded organelle | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 33 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|104530 MTLAAANDPRTISSLSSSSSAPRPQNGAGKSTPQDKTEMELQLSEGVLEKYTPSNGSQPHLEPTRDVLVDIDPSQ PPGTPSASGNHLELNHVSTSTEDFTTSGSDKVDPVAEVVSLLSAPSESFGRPDPPQEKLESFPGDFSTHDTPQSE VEERSTSTARLRSPSLQSQDFTPNKNGTRSKADASGVENVVMVARDRNSGSDDQASNVSERPPKSTRSKQKRPPD TIFQGSAKRARMTTDTFSSPVVTLMSDDRSCRTNDEDLQMNHSPSVPTSTVSSNTEKDQLKDAVDAAPILIWLRH LTLLPKSSRIQIHPPNLHLRPTAPSTSSLANNPYFALSTAFLKGPPNPASNGYNPYSLYYGPGAPISPHTPTYPY PYLYQVHSPISAAMYSTSPSFIPSPTQKSPSPHTPTGAEPQRQKPKRLKAHTVTSGNHNIPIVPRDKKGKPMLPL NVGIMTVISLGEVCMREHFHTERYIFPVGYEVTRRYLSTIDPTAEVVYHCTILDGGDGPKFQIVPSDAPGREVIA GTATGAWSSIVKQANAIRSRQHSNSVSGPDFFGLGQNTIKHLIQELPNADRLKDYVWQNFIEGGPLGGRHAAVTP ALPEDYDSTLPIGALYPAERERLKREVATSPRGLNHYPQHIIAQAEAQVQRKEPSGGQISGQQPSAGHPLVPSEV TLPLLNGHAMPHSSPGHLLGPGAVISSTQPSASAPPNTQGPSSVPATIASIMSAYPAPVATPPVATTSSTPPSGS ASSLPS* |
| Coding | >AgabiH97|104530 ATGACCCTCGCTGCAGCCAACGACCCCCGCACCATTTCTTCCCTCTCCAGCTCATCCTCTGCCCCTCGCCCCCAG AATGGGGCTGGCAAATCCACGCCCCAAGATAAAACCGAGATGGAGCTTCAACTATCCGAGGGAGTGCTCGAGAAA TATACTCCATCAAATGGTTCACAACCGCACCTTGAACCTACCCGTGATGTACTAGTAGACATCGACCCTTCCCAG CCCCCCGGGACTCCTTCAGCCTCCGGCAATCATCTCGAATTAAATCATGTTTCGACATCCACGGAAGACTTTACA ACGAGTGGCTCCGATAAAGTAGACCCTGTAGCAGAGGTTGTTTCTCTGCTCTCAGCACCATCTGAGTCTTTTGGA AGACCAGATCCTCCTCAAGAAAAACTGGAGTCATTTCCTGGAGACTTCTCCACACACGATACGCCCCAAAGCGAG GTTGAAGAACGAAGTACCTCAACCGCAAGGCTGCGGTCCCCCTCTCTTCAATCCCAGGATTTTACACCAAACAAA AACGGGACGCGTTCAAAAGCAGATGCCTCCGGTGTAGAGAATGTTGTCATGGTTGCTCGTGATCGAAACTCAGGC TCCGATGATCAGGCATCTAATGTTTCTGAACGCCCTCCTAAATCTACGAGGTCAAAGCAAAAACGTCCTCCTGAT ACGATATTTCAAGGCTCTGCAAAACGGGCGCGGATGACTACTGATACTTTCTCTAGTCCAGTAGTCACTCTCATG TCTGACGATCGTAGTTGTCGCACGAATGACGAGGACCTCCAAATGAATCATTCACCCTCTGTGCCAACCTCAACC GTGAGCTCAAATACAGAAAAAGACCAGCTGAAAGATGCGGTTGATGCTGCTCCGATTCTAATCTGGCTCCGTCAC TTGACTCTTCTCCCAAAGTCGTCCAGAATTCAAATACATCCCCCCAACCTCCATCTCCGGCCAACGGCCCCAAGT ACCTCTAGTTTAGCTAACAATCCTTATTTTGCCCTCAGCACTGCCTTTTTGAAGGGACCGCCAAATCCAGCTTCA AACGGTTACAATCCGTACAGTTTATATTATGGTCCCGGAGCTCCTATCTCGCCCCATACACCGACGTACCCATAT CCTTATCTATATCAGGTTCACAGTCCTATATCTGCGGCTATGTACTCAACAAGCCCTAGCTTCATACCGTCACCT ACCCAGAAATCGCCGTCTCCCCACACTCCCACCGGTGCCGAACCACAGCGACAAAAGCCAAAGCGGTTAAAGGCA CACACGGTGACCAGTGGGAATCACAATATACCCATCGTTCCGCGAGATAAAAAGGGCAAACCGATGCTTCCTCTG AATGTGGGTATCATGACCGTCATCAGTTTGGGTGAGGTATGTATGCGCGAGCATTTTCATACCGAACGATATATA TTTCCTGTTGGGTATGAGGTTACTAGGCGGTATCTATCGACAATAGATCCGACCGCAGAAGTTGTCTATCATTGT ACAATCCTAGATGGAGGTGATGGACCCAAATTTCAAATAGTGCCTTCGGATGCCCCGGGAAGGGAGGTCATAGCG GGTACTGCAACTGGTGCTTGGTCAAGCATCGTGAAGCAGGCCAATGCTATCCGGAGTCGCCAACATTCCAACTCG GTTTCAGGTCCTGATTTCTTCGGGCTAGGGCAGAATACGATCAAGCATTTAATTCAGGAGCTACCGAATGCCGAC CGGTTGAAGGATTACGTTTGGCAAAATTTCATCGAGGGGGGCCCTCTAGGTGGTCGACACGCAGCCGTCACACCT GCACTTCCCGAAGATTACGACTCAACGTTGCCTATCGGCGCATTATATCCTGCAGAACGTGAACGATTAAAGCGT GAGGTTGCCACGAGTCCTCGTGGTTTAAACCATTACCCGCAACATATCATAGCTCAGGCTGAAGCACAAGTGCAA CGGAAGGAGCCCAGTGGTGGTCAAATATCTGGTCAACAGCCTAGCGCCGGTCATCCACTTGTCCCCTCCGAAGTA ACTTTACCTCTACTCAACGGCCACGCCATGCCACATAGTTCTCCAGGCCATCTCCTTGGTCCTGGTGCTGTCATT TCCTCCACTCAGCCCTCTGCATCCGCTCCACCTAACACTCAGGGACCTTCATCCGTTCCAGCAACGATTGCGAGT ATAATGAGTGCTTATCCTGCCCCTGTTGCCACACCCCCTGTAGCGACGACTTCTTCCACTCCCCCATCTGGTTCT GCTTCATCCTTGCCATCATAA |
| Transcript | >AgabiH97|104530 ATGACCCTCGCTGCAGCCAACGACCCCCGCACCATTTCTTCCCTCTCCAGCTCATCCTCTGCCCCTCGCCCCCAG AATGGGGCTGGCAAATCCACGCCCCAAGATAAAACCGAGATGGAGCTTCAACTATCCGAGGGAGTGCTCGAGAAA TATACTCCATCAAATGGTTCACAACCGCACCTTGAACCTACCCGTGATGTACTAGTAGACATCGACCCTTCCCAG CCCCCCGGGACTCCTTCAGCCTCCGGCAATCATCTCGAATTAAATCATGTTTCGACATCCACGGAAGACTTTACA ACGAGTGGCTCCGATAAAGTAGACCCTGTAGCAGAGGTTGTTTCTCTGCTCTCAGCACCATCTGAGTCTTTTGGA AGACCAGATCCTCCTCAAGAAAAACTGGAGTCATTTCCTGGAGACTTCTCCACACACGATACGCCCCAAAGCGAG GTTGAAGAACGAAGTACCTCAACCGCAAGGCTGCGGTCCCCCTCTCTTCAATCCCAGGATTTTACACCAAACAAA AACGGGACGCGTTCAAAAGCAGATGCCTCCGGTGTAGAGAATGTTGTCATGGTTGCTCGTGATCGAAACTCAGGC TCCGATGATCAGGCATCTAATGTTTCTGAACGCCCTCCTAAATCTACGAGGTCAAAGCAAAAACGTCCTCCTGAT ACGATATTTCAAGGCTCTGCAAAACGGGCGCGGATGACTACTGATACTTTCTCTAGTCCAGTAGTCACTCTCATG TCTGACGATCGTAGTTGTCGCACGAATGACGAGGACCTCCAAATGAATCATTCACCCTCTGTGCCAACCTCAACC GTGAGCTCAAATACAGAAAAAGACCAGCTGAAAGATGCGGTTGATGCTGCTCCGATTCTAATCTGGCTCCGTCAC TTGACTCTTCTCCCAAAGTCGTCCAGAATTCAAATACATCCCCCCAACCTCCATCTCCGGCCAACGGCCCCAAGT ACCTCTAGTTTAGCTAACAATCCTTATTTTGCCCTCAGCACTGCCTTTTTGAAGGGACCGCCAAATCCAGCTTCA AACGGTTACAATCCGTACAGTTTATATTATGGTCCCGGAGCTCCTATCTCGCCCCATACACCGACGTACCCATAT CCTTATCTATATCAGGTTCACAGTCCTATATCTGCGGCTATGTACTCAACAAGCCCTAGCTTCATACCGTCACCT ACCCAGAAATCGCCGTCTCCCCACACTCCCACCGGTGCCGAACCACAGCGACAAAAGCCAAAGCGGTTAAAGGCA CACACGGTGACCAGTGGGAATCACAATATACCCATCGTTCCGCGAGATAAAAAGGGCAAACCGATGCTTCCTCTG AATGTGGGTATCATGACCGTCATCAGTTTGGGTGAGGTATGTATGCGCGAGCATTTTCATACCGAACGATATATA TTTCCTGTTGGGTATGAGGTTACTAGGCGGTATCTATCGACAATAGATCCGACCGCAGAAGTTGTCTATCATTGT ACAATCCTAGATGGAGGTGATGGACCCAAATTTCAAATAGTGCCTTCGGATGCCCCGGGAAGGGAGGTCATAGCG GGTACTGCAACTGGTGCTTGGTCAAGCATCGTGAAGCAGGCCAATGCTATCCGGAGTCGCCAACATTCCAACTCG GTTTCAGGTCCTGATTTCTTCGGGCTAGGGCAGAATACGATCAAGCATTTAATTCAGGAGCTACCGAATGCCGAC CGGTTGAAGGATTACGTTTGGCAAAATTTCATCGAGGGGGGCCCTCTAGGTGGTCGACACGCAGCCGTCACACCT GCACTTCCCGAAGATTACGACTCAACGTTGCCTATCGGCGCATTATATCCTGCAGAACGTGAACGATTAAAGCGT GAGGTTGCCACGAGTCCTCGTGGTTTAAACCATTACCCGCAACATATCATAGCTCAGGCTGAAGCACAAGTGCAA CGGAAGGAGCCCAGTGGTGGTCAAATATCTGGTCAACAGCCTAGCGCCGGTCATCCACTTGTCCCCTCCGAAGTA ACTTTACCTCTACTCAACGGCCACGCCATGCCACATAGTTCTCCAGGCCATCTCCTTGGTCCTGGTGCTGTCATT TCCTCCACTCAGCCCTCTGCATCCGCTCCACCTAACACTCAGGGACCTTCATCCGTTCCAGCAACGATTGCGAGT ATAATGAGTGCTTATCCTGCCCCTGTTGCCACACCCCCTGTAGCGACGACTTCTTCCACTCCCCCATCTGGTTCT GCTTCATCCTTGCCATCATAA |
| Gene | >AgabiH97|104530 ATGACCCTCGCTGCAGCCAACGACCCCCGCACCATTTCTTCCCTCTCCAGCTCATCCTCTGCCCCTCGCCCCCAG AATGGGGCTGGCAAATCCACGCCCCAAGATAAAACCGAGATGGAGCTTCAACTATCCGAGGGAGTGCTCGAGGTG GGTGTGCGAATGTCCATCTTCATATTTTGCCGCGGTGCCCAGTCTTAAATGCGTACATCAGAAATATACTCCATC AAATGGTTCACAACCGCACCTTGAACCTACCCGTGATGTACTAGTAGACATCGAGTGCGCCGGCTTTCTCGTCTT TATCTGATTCAGGTTCTGACCTTTTTGGGGTCAGCCCTTCCCAGCCCCCCGGGACTCCTTCAGCCTCCGGCAATC ATCTCGAATTAAATCATGTTTCGACATCCACGGAAGACTTTACAACGAGTGGCTCCGATAAAGTAGACCCTGTAG CAGAGGTTGTTTCTCTGCGTGAGTTATATCGCAAATATGTCATGAACGCGGACTGACATCTTCTGTTATACTCTA GTCTCAGCACCATCTGAGTCTTTTGGAAGACCAGATCCTCCTCAAGAAAAACTGGAGTCATTTCCTGGAGACTTC TCCACACACGATACGCCCCAAAGCGAGGTTGAAGAACGAAGTACCTCAACCGCAAGGCTGCGGTCCCCCTCTCTT CAATCCCAGGATTTTACACCAAACAAAAACGGGACGCGTTCAAAAGCAGATGCCTCCGGTGTAGAGAATGTTGTC ATGGTTGCTCGTGATCGAAACTCAGGCTCCGATGATCAGGCATCTAATGTTTCTGAACGCCCTCCTAAATCTACG AGGTCAAAGCAAAAACGTCCTCCTGATACGATATTTCAAGGCTCTGCAAAACGGGCGCGGATGACTACTGATACT TTCTCTAGTCCAGTAGTCACTCTCATGTCTGACGATCGTAGTTGTCGCACGAATGACGAGGGTAAGTAAGACCGT GTTTCTCCTTATTTCCGCAGACGTTACCCAATCCTGAATTACGGCCCTGTTTACATATTAGACCTCCAAATGAAT CATTCACCCTCTGTGCCAACCTCAACCGTGAGCTCAAATACAGAAAAAGACCAGCTGAAAGATGCGGTTGATGCT GCTCCGGTTTGCGATTCCTCAATTGCAAATTTTCAGACGACATCCGAAATTAATTCGAATTCAGATTCTAATCTG GCTCCGTCACTTGACTCTTCTCCCAAAGTCGTCCAGAATTCAAATACATCCCCCCAACCTCCATCTCCGGGTTCT TCAAAAATCCCTTCTCAAGACAAATCACCGCAGACCCAGCCAACGGCCCCAAGTACCTCTAGTTTAGCTAACAAT CCTTATTTTGCCCTCAGCACTGCCTTTTTGAAGGGACCGCCAAATCCAGCTTCAAACGGTTACAATCCGTACAGT TTATATTATGGTCCCGGAGCTCCTATCTCGCCCCATACACCGACGTACCCATATCCTTATCTATATCAGGTTCAC AGTCCTATATCTGCGGCTATGTACTCAACAAGCCCTAGCTTCATACCGTCACCTACCCAGAAATCGCCGTCTCCC CACACTCCCACCGGTGCCGAACCACAGCGACAAAAGCCAAAGCGGTTAAAGGCACACACGGTGACCAGTGGGAAT CACAATATACCCATCGTTCCGCGAGATAAAAAGGGCAAACCGATGCTTCCTCTGAATGTGGGTATCATGACCGTC ATCAGTTTGGGTGAGGTATGTATGCGCGAGCATTTTCATACCGAACGATATATATTTCCTGTTGGGTATGAGGTT ACTAGGTAATTTTACCTGTCACGACTTCAAACAACGGTTCTAATTTTACTTTGACCAGGCGGTATCTATCGACAA TAGATCCGACCGCAGAAGTTGTCTATCATTGTACAATCCTAGATGGAGGTGATGGACCCAAATTTCAAATAGTGC CTTCGGATGCCCCGGGAAGGGAGGTCATAGCGGGTACTGCAACTGGTGCTTGGTCAAGCATCGTGAAGCAGGCCA ATGCTATCCGGAGTCGCCAACATTCCAACTCGGTTTCAGGTCCTGATTTCTTCGGGCTAGGGCAGAATACGATCA AGCATTTAATTCAGGAGCTACCGAATGCCGACCGGTTGAAGGATTACGTTTGGCAAAATTTCATCGAGGGGGGGT ATGTCCTTTCTTCTTTTACGTGAGGTTCTCGGCTTCAACACGTTTCTATAGCCCTCTAGGTGGTCGACACGCAGC CGTCACACCTGCACTTCCCGAAGATTACGACTCAACGTTGCCTATCGGCGCATTATATCCTGCAGAACGTGAACG ATTAAAGCGTGAGGTTGCCACGAGTCCTCGTGGTTTAAACCATTACCCGCAACATATCATAGCTCAGGCTGAAGC ACAAGTGCAACGGAAGGAGCCCAGTGGTGGTCAAATATCTGGTCAACAGCCTAGCGCCGGTCATCCACTTGTCCC CTCCGAAGTAACTTTACCTCTACTCAACGGCCACGCCATGCCACATAGTTCTCCAGGCCATCTCCTTGGTCCTGG TGCTGTCATTTCCTCCACTCAGCCCTCTGCATCCGCTCCACCTAACACTCAGGGACCTTCATCCGTTCCAGCAAC GATTGCGAGTATAATGAGTGCTTATCCTGCCCCTGTTGCCACACCCCCTGTAGCGACGACTTCTTCCACTCCCCC ATCTGGTTCTGCTTCATCCTTGCCATCATAA |