Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|103990
Gene name
Locationscaffold_7:1729227..1730354
Strand-
Gene length (bp)1127
Transcript length (bp)747
Coding sequence length (bp)747
Protein length (aa) 249

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|103990
MLMTPRIWLTTLPWASCALAIPLFPFPFDIETLWTLFGGNNIPQQRIFDTAGWYDPRIGGGQMLDYTLENFGEPL
NVIISGNSDPHILTEDGIHQYAKSIGFSEECLGLHYGNRHDANLGDGDGRKVEQFLARQAYFPIIGTCWESVAGG
HHFRAWKQNGSMADSGAWFIGASKEYDYQRHHGIVPNGYNLGRDFVVKRATSGGSWKGKYWKAEVEWRTDLLEEG
SEGVNHGIEQDGRVAVLTVHRLV*
Coding >AgabiH97|103990
ATGTTAATGACCCCCCGCATCTGGCTCACCACCCTCCCTTGGGCCTCCTGCGCCCTCGCTATTCCCCTCTTTCCC
TTCCCCTTCGACATCGAGACTCTATGGACCCTCTTCGGTGGTAACAACATCCCTCAGCAAAGAATATTCGACACA
GCCGGCTGGTACGACCCTAGAATAGGCGGTGGTCAGATGCTTGACTACACACTCGAGAACTTCGGAGAACCTCTC
AACGTCATCATTTCTGGAAACTCGGATCCCCACATTCTCACTGAAGACGGAATTCATCAATATGCAAAGTCTATA
GGATTTTCGGAGGAATGCTTAGGCCTACATTACGGTAATCGACATGATGCAAATTTGGGCGACGGTGATGGTCGC
AAAGTAGAACAATTCCTCGCTCGTCAAGCCTACTTTCCAATTATTGGCACTTGCTGGGAAAGTGTAGCAGGTGGG
CACCATTTTCGTGCGTGGAAACAGAATGGCTCTATGGCAGACAGTGGCGCTTGGTTCATTGGTGCGTCAAAAGAA
TACGACTACCAGCGCCACCATGGCATTGTCCCAAATGGTTATAACCTTGGTCGTGATTTCGTTGTAAAACGCGCC
ACTTCTGGAGGAAGTTGGAAAGGTAAGTATTGGAAAGCAGAAGTAGAATGGCGCACCGATCTTCTCGAAGAAGGA
AGTGAAGGCGTCAATCATGGTATTGAACAGGATGGTCGAGTTGCTGTATTGACTGTCCACCGGTTAGTTTGA
Transcript >AgabiH97|103990
ATGTTAATGACCCCCCGCATCTGGCTCACCACCCTCCCTTGGGCCTCCTGCGCCCTCGCTATTCCCCTCTTTCCC
TTCCCCTTCGACATCGAGACTCTATGGACCCTCTTCGGTGGTAACAACATCCCTCAGCAAAGAATATTCGACACA
GCCGGCTGGTACGACCCTAGAATAGGCGGTGGTCAGATGCTTGACTACACACTCGAGAACTTCGGAGAACCTCTC
AACGTCATCATTTCTGGAAACTCGGATCCCCACATTCTCACTGAAGACGGAATTCATCAATATGCAAAGTCTATA
GGATTTTCGGAGGAATGCTTAGGCCTACATTACGGTAATCGACATGATGCAAATTTGGGCGACGGTGATGGTCGC
AAAGTAGAACAATTCCTCGCTCGTCAAGCCTACTTTCCAATTATTGGCACTTGCTGGGAAAGTGTAGCAGGTGGG
CACCATTTTCGTGCGTGGAAACAGAATGGCTCTATGGCAGACAGTGGCGCTTGGTTCATTGGTGCGTCAAAAGAA
TACGACTACCAGCGCCACCATGGCATTGTCCCAAATGGTTATAACCTTGGTCGTGATTTCGTTGTAAAACGCGCC
ACTTCTGGAGGAAGTTGGAAAGGTAAGTATTGGAAAGCAGAAGTAGAATGGCGCACCGATCTTCTCGAAGAAGGA
AGTGAAGGCGTCAATCATGGTATTGAACAGGATGGTCGAGTTGCTGTATTGACTGTCCACCGGTTAGTTTGA
Gene >AgabiH97|103990
ATGTTAATGACCCCCCGCATCTGGCTCACCACCCTCCCTTGGGCCTCCTGCGCCCTCGCTATTCCCCTCTTTCCC
TTCCCCTTCGACATCGAGACTCTATGGACCCTCTTCGGTGGTAACAACATCCCTCAGCAAAGAATATTCGACACA
GCCGGCTGGTACGACCCTAGAATAGGCGGTGGTCAGATGCTTGACGTGCGTTCACATTAATCATCTTCAATTTTC
AATATACTGAAGAGCACTGTAGTACACACTCGAGAACTTCGGAGAACCTCTCAACGTCATCATTTCTGGAAACTC
GGATCCCCACATTCTCACTGAAGACGGAATTCATCAATATGCAAAGTAAACTCTTTTCTGAATTCCTCATAAGTC
GTTATTCATCCCGTTTTGAGGTCTATAGGATTTTCGGAGGAATGCTTAGGCCTACATTACGGTAATCGACATGAT
GCAAATTTGGGCGACGGTGATGGTCGCAAAGTAGAACAATTCCTCGCTCGTCAAGCCTACTTTCCAATTATTGGC
ACTTGCTGGGAAAGTGTAGCAGGTACGGCGCACAGACCCAAACCACCGCTATCCCTCCTGATTTGCGTTCAAGGT
GGGCACCATTTTCGTGCGTGGAAACAGAATGGCTCTATGGCAGACAGTGGCGCTTGGTTCATTGGGTAGGTGCCG
AATCCGCTTTACTCGGTGTTCATAACGGCTCACACACGTGCTTGTAGTGCGTCAAAAGAATACGTAGGTAACCTT
CCTCATTTGATATACACTCCCACTCATTATCAATTCCATTTATACCTCACCGCGCACAGGACTACCAGCGCCACC
ATGGCATTGTCCCAAATGGTTATAACCTTGGTGCGAAGCTCCATTTTCTAGACTCCATCTATCTACTAAACCTCT
TATAGGTCGTGATTTCGTTGTAAAACGCGCCACTTCTGGAGGAAGTTGGAAAGGTAAGTATTGGAAAGCAGAAGT
AGAATGGCGCACCGATCTTCTCGAAGAAGGAAGTGAAGGTAGCCGTCTTTCTTTTCTCACAGAAGGCCATACCTT
AAGTCATTGCAGGCGTCAATCATGGTATTGAACAGGATGGTCGAGTTGCTGTATTGACTGTCCACCGGTTAGTTT
GA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail