Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|103660
Gene name
Locationscaffold_7:1651976..1653090
Strand-
Gene length (bp)1114
Transcript length (bp)762
Coding sequence length (bp)762
Protein length (aa) 254

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00657 Lipase_GDSL GDSL-like Lipase/Acylhydrolase 6.4E-07 33 245

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016788 hydrolase activity, acting on ester bonds Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0016787 hydrolase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|103660
MLLQSLSVLLFLAAFAASLPKHNSFRWSDIEYVYVFGDSYSYVSGTFGLPGFSFIGDATQVAFTPQSLLSSEILP
DKTSSGGANWAEYLTGCYEGLPSACPRQLWDFAHGGAVISAKMLPRRRNTTVEVDEQVQQWADYAADILPRTDGK
TLAFWWTGINDCTTICKNATITDIDAYIDADLEIYFNVIDNAARNKLRTHMIMNVPPIDLSAYLETAPAPCDAKR
LRRTISTFNDKLAARAAKYAKDHPGNLI*
Coding >AgabiH97|103660
ATGCTTCTGCAATCTCTCTCTGTGCTTCTATTTTTGGCTGCTTTCGCTGCCTCTCTCCCAAAACACAACAGTTTT
CGATGGAGCGACATTGAATATGTCTACGTCTTCGGAGATTCATATTCATATGTTTCTGGCACGTTTGGTCTACCA
GGCTTCAGTTTTATTGGTGATGCCACTCAGGTTGCTTTCACGCCCCAGTCGCTCCTTTCAAGTGAGATTCTTCCC
GATAAGACAAGCTCGGGTGGAGCAAATTGGGCAGAGTACCTTACTGGATGTTATGAGGGTCTACCGTCAGCTTGT
CCACGTCAATTGTGGGATTTCGCGCATGGAGGAGCTGTTATTAGTGCTAAAATGCTGCCACGCCGTCGAAACACC
ACGGTCGAGGTTGATGAGCAAGTTCAGCAATGGGCAGATTATGCCGCCGATATTCTTCCCCGCACGGACGGCAAG
ACCTTAGCCTTCTGGTGGACGGGAATTAATGACTGTACTACTATATGCAAGAACGCAACGATCACGGACATAGAC
GCGTACATAGATGCCGATCTGGAAATCTACTTCAATGTTATAGACAACGCCGCTCGCAATAAGCTTCGCACACAC
ATGATCATGAATGTTCCCCCAATCGATTTATCCGCCTATTTGGAAACGGCGCCGGCTCCATGTGATGCGAAACGA
CTAAGAAGGACGATCAGCACGTTTAACGACAAACTCGCCGCTCGCGCTGCCAAATATGCGAAAGACCATCCAGGT
AATTTGATCTAA
Transcript >AgabiH97|103660
ATGCTTCTGCAATCTCTCTCTGTGCTTCTATTTTTGGCTGCTTTCGCTGCCTCTCTCCCAAAACACAACAGTTTT
CGATGGAGCGACATTGAATATGTCTACGTCTTCGGAGATTCATATTCATATGTTTCTGGCACGTTTGGTCTACCA
GGCTTCAGTTTTATTGGTGATGCCACTCAGGTTGCTTTCACGCCCCAGTCGCTCCTTTCAAGTGAGATTCTTCCC
GATAAGACAAGCTCGGGTGGAGCAAATTGGGCAGAGTACCTTACTGGATGTTATGAGGGTCTACCGTCAGCTTGT
CCACGTCAATTGTGGGATTTCGCGCATGGAGGAGCTGTTATTAGTGCTAAAATGCTGCCACGCCGTCGAAACACC
ACGGTCGAGGTTGATGAGCAAGTTCAGCAATGGGCAGATTATGCCGCCGATATTCTTCCCCGCACGGACGGCAAG
ACCTTAGCCTTCTGGTGGACGGGAATTAATGACTGTACTACTATATGCAAGAACGCAACGATCACGGACATAGAC
GCGTACATAGATGCCGATCTGGAAATCTACTTCAATGTTATAGACAACGCCGCTCGCAATAAGCTTCGCACACAC
ATGATCATGAATGTTCCCCCAATCGATTTATCCGCCTATTTGGAAACGGCGCCGGCTCCATGTGATGCGAAACGA
CTAAGAAGGACGATCAGCACGTTTAACGACAAACTCGCCGCTCGCGCTGCCAAATATGCGAAAGACCATCCAGGT
AATTTGATCTAA
Gene >AgabiH97|103660
ATGCTTCTGCAATCTCTCTCTGTGCTTCTATTTTTGGCTGCTTTCGCTGCCTCTCTCCCAAAACACAACAGTTTT
CGATGGAGCGACATTGAATATGTCTACGTCTTCGGAGATTCATATTCATATGTTTCTGGCACGTTTGGTCTACCA
GGCTTCAGGTTAGTAATATTTGAAATCAGGTCAGAAAAAAGCATTAATTATCCCGTATAGTTTTATTGGTGATGC
CACTCAGGTTGCTTTCACGCCCCAGTCGCTCCTTTCAAGTGAGATTCTTCCCGATAAGGTATGGATGACTTCACT
CCTGTGTTTAGTATAGTCATAGTGAACACTCATATCGACAGACAAGCTCGGGTGGAGCAAATTGGGTGAGCCAAC
AAGATCCCTATACCCTTGCATTATCTGACGCCTCGATAGGCAGAGTACCTTACTGGATGTTATGAGGGTCTACCG
TCAGCTTGTCCACGTCAATTGTGGGATTTCGCGCATGGAGGAGCTGTTATTAGTGCTAAAATGTAGGTGTCGCTT
CATTTCCAGACCGTAACTCTGCCTCATCATCGACCTGATGTGATAGGCTGCCACGCCGTCGAAACACCACGGTCG
AGGTTGATGAGCAAGTTCAGCAATGGGCAGATTATGCCGCCGATATTCTTCCCCGCACGGACGGCAAGACCTTAG
CCTTCTGGTGGACGGGAATTAATGACTGTACTACTATATGCAAGAACGCAACGGTTGGTTTTAGTTTTCCTTTCA
ACTTACTTTGAAGTAACATACCGTTGCTCTCTAGATCACGGACATAGACGCGTACATAGATGCCGATCTGGAAAT
CTACTTCAATGTTATAGTATGTTTGTTTTTCTTCAACATTCAAATCCACACTTTGACAGTTGTTATCAATCGATA
TTTTTTATCATTGTTCTAGGACAACGCCGCTCGCAATAAGCTTCGCACACACATGATCATGAATGTTCCCCCAAT
CGATTTATCCGCCTATTTGGAAACGGCGCCGGCTCCATGTGATGCGAAACGACTAAGAAGGACGATCAGCACGTT
TAACGACAAACTCGCCGCTCGCGCTGCCAAATATGCGAAAGACCATCCAGGTAATTTGATCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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