Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|103360
Gene name
Locationscaffold_7:1584455..1586172
Strand-
Gene length (bp)1717
Transcript length (bp)1536
Coding sequence length (bp)1536
Protein length (aa) 512

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 1.7E-05 6 40
PF00646 F-box F-box domain 2.9E-04 5 39

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.5036 0.5416 0.0284 0.0202 0.2563 0.0614 0.2473 0.2221 0.2894 0.0079

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup4909
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|103360
Agaricus bisporus var bisporus H97 AgabiH97|103360 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|77_8

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|103360
MTQMFTNLPNDVLICIFQFLSPVELAHLSLACSVLYHLVNEYGWSAYLRSHIRPSQSLSRARARWPARLRAKYDY
LTDEAWHNNSFVARPLSHPWQGKSSPLLIISQNRLIVASGTTLHSFTFGTSGDESNTSPPVSFEASFSLSSEHSP
CKEITGVTLVSSDGSNDVLFVAFQDSVIERISISASDGITPPSITRHHASTIPDSDPVESLSSASDLLLSLSLNG
SVKLANHRDLTSSVGLNWNSTEDLKARSWASYLCLSSSTPYAAFGTSNRSAPLPIYTLPYHQFSSSIPSLLLTSG
SRSNSPITTSSSAVYGLSQAPPSSPWGSSPQILVAGWYDSKVRCYDLRTPTSSSIPFQSSDSLNGTPSSSLVSVP
ALNPVLSLHNPWSYEPIYSVSCGGGSGSFIAAGAARHSVLSFWDIRSPKGGWSVHAPGNDTSPVYSVILESSRCF
GATERRPFVYDFGPGVIIDTYPPITRVRGDKLKFEKSSGRKGVDYYVTKYPHSRGNIFIDH*
Coding >AgabiH97|103360
ATGACTCAAATGTTCACAAATCTACCCAACGACGTCCTCATTTGCATATTTCAATTCTTGTCCCCGGTCGAGCTC
GCCCATCTTTCCCTGGCATGCAGTGTTCTGTATCATTTGGTCAATGAATACGGCTGGTCTGCCTACCTACGCTCG
CACATAAGGCCTTCCCAAAGCCTTTCCCGTGCCAGAGCGCGCTGGCCGGCGCGACTCCGCGCCAAATACGATTAC
CTCACCGATGAAGCCTGGCACAACAATTCTTTCGTCGCAAGGCCGCTATCTCACCCTTGGCAGGGCAAGAGTTCT
CCACTCCTTATCATTTCACAGAACCGCCTCATCGTTGCTTCGGGGACTACCCTCCATTCTTTCACATTCGGTACA
TCTGGTGATGAATCAAATACTTCCCCACCCGTCTCCTTCGAGGCCTCATTCTCTCTATCGAGTGAACATTCGCCT
TGTAAAGAGATCACTGGCGTTACTCTGGTTTCTTCCGATGGCTCCAATGACGTTCTTTTTGTTGCTTTCCAAGAC
AGCGTTATAGAACGCATCTCCATTTCAGCATCGGATGGTATCACCCCACCCAGCATCACCCGTCACCACGCTAGT
ACAATACCCGATAGTGACCCTGTCGAAAGTCTCTCATCTGCCTCTGATCTTCTATTATCGCTATCTCTCAATGGA
TCCGTTAAACTCGCAAATCACCGTGATTTAACCTCTTCTGTAGGGCTTAATTGGAATTCCACAGAAGATCTCAAA
GCACGTAGCTGGGCGTCGTACCTGTGTCTTTCGTCTTCCACTCCCTATGCTGCATTCGGAACCTCCAATCGCTCT
GCACCACTTCCCATCTATACTCTACCTTACCACCAATTCTCATCCTCTATACCATCCTTGCTTCTCACATCCGGA
TCAAGATCTAATTCTCCCATAACCACATCTTCTTCCGCTGTCTACGGACTCTCTCAAGCACCTCCTTCTTCTCCC
TGGGGTTCTTCACCTCAAATTCTAGTTGCCGGTTGGTACGATAGTAAAGTTCGGTGTTATGATCTCCGCACTCCA
ACTTCGTCCTCTATCCCCTTCCAATCCTCCGACTCCCTTAACGGTACACCATCGTCATCATTGGTGAGCGTGCCA
GCGCTCAATCCAGTACTTTCACTCCATAATCCTTGGTCATATGAACCCATATATTCTGTCTCCTGCGGTGGTGGT
TCAGGAAGTTTTATCGCTGCAGGTGCTGCACGTCATAGCGTACTCTCTTTTTGGGATATCCGATCTCCGAAAGGA
GGATGGAGCGTACATGCTCCAGGAAATGATACTTCACCCGTTTATTCAGTCATTCTTGAAAGTTCAAGGTGTTTT
GGAGCTACGGAACGTCGACCCTTTGTTTATGATTTCGGACCTGGCGTGATTATCGATACATACCCACCTATCACG
CGTGTGCGAGGTGATAAGCTCAAATTTGAAAAATCATCCGGTCGGAAAGGCGTTGATTACTACGTGACGAAATAC
CCTCATAGCCGAGGAAATATATTTATCGATCATTGA
Transcript >AgabiH97|103360
ATGACTCAAATGTTCACAAATCTACCCAACGACGTCCTCATTTGCATATTTCAATTCTTGTCCCCGGTCGAGCTC
GCCCATCTTTCCCTGGCATGCAGTGTTCTGTATCATTTGGTCAATGAATACGGCTGGTCTGCCTACCTACGCTCG
CACATAAGGCCTTCCCAAAGCCTTTCCCGTGCCAGAGCGCGCTGGCCGGCGCGACTCCGCGCCAAATACGATTAC
CTCACCGATGAAGCCTGGCACAACAATTCTTTCGTCGCAAGGCCGCTATCTCACCCTTGGCAGGGCAAGAGTTCT
CCACTCCTTATCATTTCACAGAACCGCCTCATCGTTGCTTCGGGGACTACCCTCCATTCTTTCACATTCGGTACA
TCTGGTGATGAATCAAATACTTCCCCACCCGTCTCCTTCGAGGCCTCATTCTCTCTATCGAGTGAACATTCGCCT
TGTAAAGAGATCACTGGCGTTACTCTGGTTTCTTCCGATGGCTCCAATGACGTTCTTTTTGTTGCTTTCCAAGAC
AGCGTTATAGAACGCATCTCCATTTCAGCATCGGATGGTATCACCCCACCCAGCATCACCCGTCACCACGCTAGT
ACAATACCCGATAGTGACCCTGTCGAAAGTCTCTCATCTGCCTCTGATCTTCTATTATCGCTATCTCTCAATGGA
TCCGTTAAACTCGCAAATCACCGTGATTTAACCTCTTCTGTAGGGCTTAATTGGAATTCCACAGAAGATCTCAAA
GCACGTAGCTGGGCGTCGTACCTGTGTCTTTCGTCTTCCACTCCCTATGCTGCATTCGGAACCTCCAATCGCTCT
GCACCACTTCCCATCTATACTCTACCTTACCACCAATTCTCATCCTCTATACCATCCTTGCTTCTCACATCCGGA
TCAAGATCTAATTCTCCCATAACCACATCTTCTTCCGCTGTCTACGGACTCTCTCAAGCACCTCCTTCTTCTCCC
TGGGGTTCTTCACCTCAAATTCTAGTTGCCGGTTGGTACGATAGTAAAGTTCGGTGTTATGATCTCCGCACTCCA
ACTTCGTCCTCTATCCCCTTCCAATCCTCCGACTCCCTTAACGGTACACCATCGTCATCATTGGTGAGCGTGCCA
GCGCTCAATCCAGTACTTTCACTCCATAATCCTTGGTCATATGAACCCATATATTCTGTCTCCTGCGGTGGTGGT
TCAGGAAGTTTTATCGCTGCAGGTGCTGCACGTCATAGCGTACTCTCTTTTTGGGATATCCGATCTCCGAAAGGA
GGATGGAGCGTACATGCTCCAGGAAATGATACTTCACCCGTTTATTCAGTCATTCTTGAAAGTTCAAGGTGTTTT
GGAGCTACGGAACGTCGACCCTTTGTTTATGATTTCGGACCTGGCGTGATTATCGATACATACCCACCTATCACG
CGTGTGCGAGGTGATAAGCTCAAATTTGAAAAATCATCCGGTCGGAAAGGCGTTGATTACTACGTGACGAAATAC
CCTCATAGCCGAGGAAATATATTTATCGATCATTGA
Gene >AgabiH97|103360
ATGACTCAAGTAGGTTTACTTCAAAGCCCCGACAGCGGGGACGTTAGGTTCGCCTAGCTTAATTTTCACAGATGT
TCACAAATCTACCCAACGACGTCCTCATTTGCATATTTCAATTCTTGTCCCCGGTCGAGCTCGCCCATCTTTCCC
TGGCATGCAGTGTTCTGTATCATTTGGTGCGTCCTACGTCTCCACCTATCAGTGAATGGTACTACATCTATCGTC
AGGTCAATGAATACGGCTGGTCTGCCTACCTACGCTCGCACATAAGGCCTTCCCAAAGCCTTTCCCGTGCCAGAG
CGCGCTGGCCGGCGCGACTCCGCGCCAAATACGATTACCTCACCGATGAAGCCTGGCACAACAATTCTTTCGTCG
CAAGGCCGCTATCTCACCCTTGGCAGGGCAAGAGTTCTCCACTCCTTATCATTTCACAGAACCGCCTCATCGTTG
CTTCGGGGACTACCCTCCATTCTTTCACATTCGGTACATCTGGTGATGAATCAAATACTTCCCCACCCGTCTCCT
TCGAGGCCTCATTCTCTCTATCGAGTGAACATTCGCCTTGTAAAGAGATCACTGGCGTTACTCTGGTTTCTTCCG
ATGGCTCCAATGACGTTCTTTTTGTTGCTTTCCAAGACAGCGTTATAGAACGCATCTCCATTTCAGCATCGGATG
GTATCACCCCACCCAGCATCACCCGTCACCACGCTAGTACAATACCCGATAGTGACCCTGTCGAAAGTCTCTCAT
CTGCCTCTGATCTTCTATTATCGCTATCTCTCAATGGATCCGTTAAACTCGCAAATCACCGTGATTTAACCTCTT
CTGTAGGGCTTAATTGGAATTCCACAGAAGATCTCAAAGCACGTAGCTGGGCGTCGTACCTGTGTCTTTCGTCTT
CCACTCCCTATGCTGCATTCGGAACCTCCAATCGCTCTGCACCACTTCCCATCTATACTCTACCTTACCACCAAT
TCTCATCCTCTATACCATCCTTGCTTCTCACATCCGGATCAAGATCTAATTCTCCCATAACCACATCTTCTTCCG
CTGTCTACGGACTCTCTCAAGCACCTCCTTCTTCTCCCTGGGGTTCTTCACCTCAAATTCTAGTTGCCGGTTGGT
ACGATAGTAAAGTTCGGTGTTATGATCTCCGCACTCCAACTTCGTCCTCTATCCCCTTCCAATCCTCCGACTCCC
TTAACGGTACACCATCGTCATCATTGGTGAGCGTGCCAGCGCTCAATCCAGTACTTTCACTCCATAATCCTTGGT
CATATGAACCCATATATTCTGTCTCCTGCGGTGGTGGTTCAGGAAGTTTTATCGCTGCAGGTGCTGCACGTCATA
GCGTACTCTCTTTTTGGGATATCCGATCTCCGAAAGGAGGATGGAGCGTACATGCTCCAGGAAATGATACTTCAC
CCGTTTATTCAGTCATTCTTGAAAGTTCAAGGTGTTTTGGAGCTACGGAACGTCGACCCTTTGTTTATGATTTCG
TGAGTTGACTTATCTTTCTCTTTCTTTTTCCTTATCGAATGCGACACGATTCTAATTTTCTTCTTAGGGACCTGG
CGTGATTATCGATACATACCCACCTATCACGCGTGTGCGAGGTGATAAGCTCAAATTTGAAAAATCATCCGGTCG
GAAAGGCGTTGATTACTACGTGACGAAATACCCTCATAGCCGAGGAAATATATTTATCGATCATTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail