Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|102990
Gene name
Locationscaffold_7:1482594..1484120
Strand-
Gene length (bp)1526
Transcript length (bp)1374
Coding sequence length (bp)1374
Protein length (aa) 458

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01073 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family 5.9E-62 9 229
PF01073 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family 6.9E-05 330 364
PF01370 Epimerase NAD dependent epimerase/dehydratase family 3.5E-29 9 222
PF16363 GDP_Man_Dehyd GDP-mannose 4,6 dehydratase 4.5E-11 9 217
PF04321 RmlD_sub_bind RmlD substrate binding domain 7.0E-12 9 199
PF13460 NAD_binding_10 NAD(P)H-binding 2.1E-10 12 171
PF07993 NAD_binding_4 Male sterility protein 1.6E-06 66 212
PF02719 Polysacc_synt_2 Polysaccharide biosynthesis protein 2.7E-04 46 113

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P53199|ERG26_YEAST Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG26 PE=1 SV=1 6 221 3.0E-63
sp|O43050|ERG26_SCHPO Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg26 PE=3 SV=1 9 221 1.0E-59
sp|Q5PPL3|NSDHL_RAT Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Rattus norvegicus GN=Nsdhl PE=2 SV=1 10 221 2.0E-53
sp|Q9R1J0|NSDHL_MOUSE Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Mus musculus GN=Nsdhl PE=1 SV=1 1 221 7.0E-52
sp|Q3ZBE9|NSDHL_BOVIN Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Bos taurus GN=NSDHL PE=2 SV=1 10 222 8.0E-52
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P53199|ERG26_YEAST Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG26 PE=1 SV=1 6 221 3.0E-63
sp|O43050|ERG26_SCHPO Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg26 PE=3 SV=1 9 221 1.0E-59
sp|Q5PPL3|NSDHL_RAT Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Rattus norvegicus GN=Nsdhl PE=2 SV=1 10 221 2.0E-53
sp|Q9R1J0|NSDHL_MOUSE Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Mus musculus GN=Nsdhl PE=1 SV=1 1 221 7.0E-52
sp|Q3ZBE9|NSDHL_BOVIN Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Bos taurus GN=NSDHL PE=2 SV=1 10 222 8.0E-52
sp|Q15738|NSDHL_HUMAN Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Homo sapiens GN=NSDHL PE=1 SV=2 10 221 4.0E-51
sp|Q67ZE1|HSDD2_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 OS=Arabidopsis thaliana GN=3BETAHSD/D2 PE=2 SV=2 9 221 7.0E-40
sp|Q9FX01|HSDD1_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 OS=Arabidopsis thaliana GN=3BETAHSD/D1 PE=2 SV=1 9 221 2.0E-39
sp|Q9D665|D42E1_MOUSE Short-chain dehydrogenase/reductase family 42E member 1 OS=Mus musculus GN=Sdr42e1 PE=1 SV=1 6 221 6.0E-33
sp|Q4R7R1|D42E1_MACFA Short-chain dehydrogenase/reductase family 42E member 1 OS=Macaca fascicularis GN=SDR42E1 PE=2 SV=1 5 221 3.0E-32
sp|A8DZE7|D42E1_DANRE Short-chain dehydrogenase/reductase family 42E member 1 OS=Danio rerio GN=sdr42e1 PE=2 SV=1 6 221 1.0E-31
sp|Q8WUS8|D42E1_HUMAN Short-chain dehydrogenase/reductase family 42E member 1 OS=Homo sapiens GN=SDR42E1 PE=2 SV=2 5 221 4.0E-31
sp|Q32L94|D42E1_BOVIN Short-chain dehydrogenase/reductase family 42E member 1 OS=Bos taurus GN=SDR42E1 PE=2 SV=2 5 221 1.0E-30
sp|P9WQP7|3BHS_MYCTU 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1106c PE=1 SV=1 9 229 3.0E-30
sp|P9WQP6|3BHS_MYCTO 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1137 PE=3 SV=1 9 229 3.0E-30
sp|Q0IH73|D42E1_XENLA Short-chain dehydrogenase/reductase family 42E member 1 OS=Xenopus laevis GN=sdr42e1 PE=2 SV=1 3 249 4.0E-30
sp|Q9EQC1|3BHS7_MOUSE 3 beta-hydroxysteroid dehydrogenase type 7 OS=Mus musculus GN=Hsd3b7 PE=1 SV=1 7 222 7.0E-29
sp|A9X4U2|HSDD3_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3 OS=Arabidopsis thaliana GN=3BETAHSD/D3 PE=2 SV=2 7 222 2.0E-25
sp|O43050|ERG26_SCHPO Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erg26 PE=3 SV=1 337 443 7.0E-25
sp|Q67477|3BHS_FOWPN 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Fowlpox virus (strain NVSL) GN=FPV046 PE=3 SV=2 8 232 7.0E-24
sp|Q9H2F3|3BHS7_HUMAN 3 beta-hydroxysteroid dehydrogenase type 7 OS=Homo sapiens GN=HSD3B7 PE=1 SV=2 7 222 3.0E-23
sp|O35048|3BHS7_RAT 3 beta-hydroxysteroid dehydrogenase type 7 OS=Rattus norvegicus GN=Hsd3b7 PE=2 SV=1 7 222 2.0E-22
sp|P53199|ERG26_YEAST Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG26 PE=1 SV=1 335 446 5.0E-22
sp|P26670|3BHS_VACCW 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Vaccinia virus (strain Western Reserve) GN=VACWR170 PE=3 SV=1 7 258 2.0E-21
sp|O57245|3BHS_VACCA 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Vaccinia virus (strain Ankara) GN=MVA157L PE=3 SV=1 7 258 3.0E-21
sp|P21097|3BHS_VACCC 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Vaccinia virus (strain Copenhagen) GN=A44L PE=3 SV=1 7 224 5.0E-21
sp|A6NKP2|D42E2_HUMAN Putative short-chain dehydrogenase/reductase family 42E member 2 OS=Homo sapiens GN=SDR42E2 PE=3 SV=3 4 221 1.0E-20
sp|O84903|GALE_LACCA UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1 7 222 2.0E-18
sp|P55579|Y4NG_RHISN Uncharacterized protein y4nG OS=Rhizobium sp. (strain NGR234) GN=NGR_a02350 PE=3 SV=1 1 219 8.0E-18
sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0211 PE=3 SV=1 9 219 1.0E-15
sp|Q9N119|3BHS_PIG 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Sus scrofa GN=HSD3B PE=2 SV=4 9 245 2.0E-15
sp|Q6GZS4|052L_FRG3G Uncharacterized protein 052L OS=Frog virus 3 (isolate Goorha) GN=FV3-052L PE=3 SV=1 8 214 4.0E-15
sp|P14060|3BHS1_HUMAN 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 OS=Homo sapiens GN=HSD3B1 PE=1 SV=2 9 230 5.0E-15
sp|Q7WTB1|GALE_LACHE UDP-glucose 4-epimerase OS=Lactobacillus helveticus GN=galE PE=2 SV=1 9 217 6.0E-15
sp|O46516|3BHS_HORSE 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Equus caballus GN=HSD3B PE=2 SV=3 9 245 9.0E-15
sp|Q61767|3BHS4_MOUSE 3 beta-hydroxysteroid dehydrogenase type 4 OS=Mus musculus GN=Hsd3b4 PE=1 SV=3 9 230 3.0E-14
sp|Q8X7P7|GNU_ECO57 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase OS=Escherichia coli O157:H7 GN=gnu PE=1 SV=1 6 212 5.0E-14
sp|Q9KDV3|GALE_BACHD UDP-glucose 4-epimerase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=galE PE=3 SV=1 9 221 7.0E-14
sp|P26150|3BHS3_MOUSE 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 3 OS=Mus musculus GN=Hsd3b3 PE=1 SV=3 9 244 1.0E-13
sp|Q64421|3BHS2_MESAU 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 OS=Mesocricetus auratus GN=HSD3B2 PE=2 SV=3 9 228 1.0E-13
sp|P26149|3BHS2_MOUSE 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 OS=Mus musculus GN=Hsd3b2 PE=1 SV=4 9 228 1.0E-13
sp|O35469|3BHS6_MOUSE 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 6 OS=Mus musculus GN=Hsd3b6 PE=1 SV=4 9 228 3.0E-13
sp|Q5IFP1|3BHS_CANLF 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Canis lupus familiaris GN=HSD3B PE=2 SV=3 9 230 6.0E-13
sp|P26439|3BHS2_HUMAN 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 OS=Homo sapiens GN=HSD3B2 PE=1 SV=2 9 228 8.0E-13
sp|P27365|3BHS1_MACMU 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 OS=Macaca mulatta GN=HSD3B1 PE=2 SV=2 9 228 1.0E-12
sp|Q61694|3BHS5_MOUSE 3 beta-hydroxysteroid dehydrogenase type 5 OS=Mus musculus GN=Hsd3b5 PE=1 SV=4 9 230 1.0E-12
sp|Q59083|EXOB_AZOBR UDP-glucose 4-epimerase OS=Azospirillum brasilense GN=exoB PE=3 SV=1 9 217 2.0E-12
sp|P27364|3BHS5_RAT 3 beta-hydroxysteroid dehydrogenase type 5 OS=Rattus norvegicus GN=Hsd3b5 PE=2 SV=3 9 224 2.0E-12
sp|Q62878|3BHS4_RAT 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 4 OS=Rattus norvegicus GN=Hsd3b6 PE=2 SV=4 9 224 3.0E-12
sp|P22071|3BHS1_RAT 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 OS=Rattus norvegicus GN=Hsd3b1 PE=2 SV=3 9 224 4.0E-12
sp|P22072|3BHS2_RAT 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 OS=Rattus norvegicus GN=Hsd3b PE=2 SV=3 9 224 1.0E-11
sp|P24815|3BHS1_MOUSE 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 OS=Mus musculus GN=Hsd3b1 PE=1 SV=3 9 224 2.0E-11
sp|P96995|GALE_STRMU UDP-glucose 4-epimerase OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA159) GN=galE PE=3 SV=2 9 221 4.0E-11
sp|Q60555|3BHS1_MESAU 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 OS=Mesocricetus auratus GN=HSD3B1 PE=2 SV=3 9 228 5.0E-11
sp|P21977|GALE_STRTR UDP-glucose 4-epimerase OS=Streptococcus thermophilus GN=galE PE=3 SV=1 9 221 2.0E-10
sp|P73212|DFRA_SYNY3 Putative dihydroflavonol-4-reductase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dfrA PE=3 SV=1 6 220 2.0E-10
sp|P22715|GALE_SALTY UDP-glucose 4-epimerase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=galE PE=3 SV=2 9 221 2.0E-10
sp|Q56093|GALE_SALTI UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2 9 221 3.0E-10
sp|P35673|GALE_ERWAM UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1 7 221 4.0E-10
sp|Q56623|GALE_VIBCL UDP-glucose 4-epimerase OS=Vibrio cholerae GN=galE PE=3 SV=1 3 188 7.0E-10
sp|Q6K2E1|UGE4_ORYSJ UDP-glucose 4-epimerase 4 OS=Oryza sativa subsp. japonica GN=UGE-4 PE=2 SV=1 7 221 7.0E-10
sp|Q40316|VESTR_MEDSA Vestitone reductase OS=Medicago sativa PE=1 SV=1 1 215 7.0E-10
sp|P09147|GALE_ECOLI UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE PE=1 SV=1 9 225 1.0E-09
sp|Q54L85|NSDHL_DICDI Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Dictyostelium discoideum GN=nsdhl PE=3 SV=1 10 222 2.0E-09
sp|O35296|3BHS3_MESAU 3 beta-hydroxysteroid dehydrogenase type 3 OS=Mesocricetus auratus GN=HSD3B3 PE=2 SV=3 9 228 4.0E-09
sp|Q9SN58|UGE5_ARATH UDP-glucose 4-epimerase 5 OS=Arabidopsis thaliana GN=UGE5 PE=1 SV=3 9 222 6.0E-09
sp|Q652A8|UGE3_ORYSJ UDP-glucose 4-epimerase 3 OS=Oryza sativa subsp. japonica GN=UGE-3 PE=2 SV=1 7 225 9.0E-09
sp|Q59745|EXOB_RHILT UDP-glucose 4-epimerase OS=Rhizobium leguminosarum bv. trifolii GN=exoB PE=3 SV=1 4 221 1.0E-08
sp|Q9R1J0|NSDHL_MOUSE Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Mus musculus GN=Nsdhl PE=1 SV=1 335 446 2.0E-08
sp|P45602|GALE_KLEPN UDP-glucose 4-epimerase (Fragment) OS=Klebsiella pneumoniae GN=galE PE=3 SV=1 9 116 4.0E-08
sp|Q5PPL3|NSDHL_RAT Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Rattus norvegicus GN=Nsdhl PE=2 SV=1 335 445 5.0E-08
sp|B0M3E8|UGE1_PEA Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 OS=Pisum sativum GN=UGE1 PE=1 SV=2 1 116 7.0E-08
sp|P04397|GAL10_YEAST Bifunctional protein GAL10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAL10 PE=1 SV=2 9 231 9.0E-08
sp|Q3ZBE9|NSDHL_BOVIN Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Bos taurus GN=NSDHL PE=2 SV=1 335 446 1.0E-07
sp|P56985|GALE_NEIMB UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup B (strain MC58) GN=galE PE=3 SV=1 9 217 1.0E-07
sp|Q3T105|GALE_BOVIN UDP-glucose 4-epimerase OS=Bos taurus GN=GALE PE=2 SV=2 9 221 2.0E-07
sp|Q9T0A7|UGE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=UGE2 PE=1 SV=1 1 222 2.0E-07
sp|Q6ZDJ7|UGE2_ORYSJ UDP-glucose 4-epimerase 2 OS=Oryza sativa subsp. japonica GN=UGE-2 PE=2 SV=1 7 221 3.0E-07
sp|P56997|GALE_NEIMA UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=galE PE=3 SV=1 9 217 3.0E-07
sp|Q9FX01|HSDD1_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 OS=Arabidopsis thaliana GN=3BETAHSD/D1 PE=2 SV=1 334 441 4.0E-07
sp|Q05026|GALE_NEIGO UDP-glucose 4-epimerase OS=Neisseria gonorrhoeae GN=galE PE=3 SV=1 7 217 4.0E-07
sp|Q5R8D0|GALE_PONAB UDP-glucose 4-epimerase OS=Pongo abelii GN=GALE PE=2 SV=1 9 221 4.0E-07
sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1 1 116 4.0E-07
sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1 4 224 4.0E-07
sp|P40801|GAL10_PACTA Bifunctional protein GAL10 OS=Pachysolen tannophilus GN=GAL10 PE=2 SV=1 9 221 4.0E-07
sp|O22141|GAE4_ARATH UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1 7 219 5.0E-07
sp|Q14376|GALE_HUMAN UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE=1 SV=2 9 221 5.0E-07
sp|Q8LNZ3|UGE1_ORYSJ UDP-glucose 4-epimerase 1 OS=Oryza sativa subsp. japonica GN=UGE-1 PE=2 SV=1 7 221 5.0E-07
sp|Q8R059|GALE_MOUSE UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=1 SV=1 9 221 5.0E-07
sp|Q553X7|GALE_DICDI UDP-glucose 4-epimerase OS=Dictyostelium discoideum GN=galE PE=1 SV=1 1 221 5.0E-07
sp|P26503|EXOB_RHIME UDP-glucose 4-epimerase OS=Rhizobium meliloti (strain 1021) GN=exoB PE=3 SV=1 9 221 8.0E-07
sp|Q9W0P5|GALE_DROME UDP-glucose 4-epimerase OS=Drosophila melanogaster GN=Gale PE=1 SV=1 7 221 9.0E-07
sp|Q9Y7X5|UGE1_SCHPO UDP-glucose 4-epimerase uge1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=uge1 PE=1 SV=1 7 221 2.0E-06
sp|O65780|GALE1_CYATE UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetragonoloba PE=2 SV=1 6 221 3.0E-06
sp|Q15738|NSDHL_HUMAN Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Homo sapiens GN=NSDHL PE=1 SV=2 335 444 4.0E-06
sp|P14169|RFBE_SALTI CDP-paratose 2-epimerase OS=Salmonella typhi GN=rfbE PE=1 SV=2 9 172 4.0E-06
sp|Q9M0B6|GAE1_ARATH UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1 9 219 4.0E-06
sp|Q8H0B6|ARAE2_ORYSJ Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa subsp. japonica GN=UEL-2 PE=2 SV=1 9 220 5.0E-06
sp|P09609|GAL10_KLULA Bifunctional protein GAL10 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=GAL10 PE=2 SV=2 4 222 6.0E-06
sp|Q9SA77|ARAE1_ARATH UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1 SV=1 9 220 6.0E-06
sp|Q89187|3BHS_VAR67 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Variola virus (isolate Human/India/Ind3/1967) GN=A49L PE=3 SV=1 128 224 6.0E-06
sp|P18645|GALE_RAT UDP-glucose 4-epimerase OS=Rattus norvegicus GN=Gale PE=2 SV=1 6 221 6.0E-06
sp|Q9SYM5|RHM1_ARATH Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 OS=Arabidopsis thaliana GN=RHM1 PE=1 SV=1 9 213 6.0E-06
sp|Q9CNY5|GALE_PASMU UDP-glucose 4-epimerase OS=Pasteurella multocida (strain Pm70) GN=galE PE=3 SV=1 9 220 7.0E-06
sp|Q9F7D4|GALE_YERPE UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE PE=3 SV=1 9 225 7.0E-06
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GO

GO Term Description Terminal node
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Yes
GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity Yes
GO:0006694 steroid biosynthetic process Yes
GO:1901576 organic substance biosynthetic process No
GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor No
GO:0009058 biosynthetic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0008150 biological_process No
GO:0016229 steroid dehydrogenase activity No
GO:0008202 steroid metabolic process No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0008152 metabolic process No
GO:0003674 molecular_function No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0044238 primary metabolic process No
GO:0008610 lipid biosynthetic process No
GO:0003824 catalytic activity No
GO:0016491 oxidoreductase activity No
GO:0006629 lipid metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 28 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Casing Casing mycelium 141.33 76.83 205.83
Initials Initials knots 79.11 47.16 111.06
Pileal_Stipeal_center Stage I stipe center 222.33 126.43 318.23
Pileal_Stipeal_shell Stage I stipe shell 310.79 166.14 455.43
DIF_stipe_center Stage II stipe center 260.00 147.28 372.73
DIF_stipe_shell Stage II stipe shell 209.09 120.81 297.36
DIF_stipe_skin Stage II stipe skin 193.42 112.28 274.56
DIF_cap_skin Stage II cap skin 391.39 208.89 573.89
DIF_cap_tissue Stage II cap tissue 393.34 210.76 575.92
DIF_gill_tissue Stage II gill tissue 338.12 184.51 491.73
YFB_stipe_center Young fruiting body stipe center 238.26 133.08 343.43
YFB_stipe_shell Young fruiting body stipe shell 228.52 128.44 328.59
YFB_stipe_skin Young fruiting body stipe skin 172.88 98.98 246.79
YFB_cap_skin Young fruiting body cap skin 348.74 190.22 507.26
YFB_cap_tissue Young fruiting body cap tissue 424.90 224.81 624.98
YFB_gill_tissue Young fruiting body gill tissue 301.19 166.11 436.26
YFB_veil Young fruiting body veil 318.12 174.91 461.33

Differential expression

Label1 Label2 Q-value Significant difference
Casing DIF_gill_tissue 0.001625 yes
Casing YFB_stipe_center 0.087416 no
Casing YFB_stipe_shell 0.118094 no
Casing YFB_stipe_skin 0.622766 no
Casing YFB_cap_skin 0.001140 yes
Casing YFB_cap_tissue 0.000613 yes
Casing YFB_gill_tissue 0.004928 yes
Casing YFB_veil 0.003365 yes
Casing Initials 0.040723 yes
Casing Pileal_Stipeal_center 0.153833 no
Casing Pileal_Stipeal_shell 0.004160 yes
Casing DIF_stipe_center 0.034142 yes
Casing DIF_stipe_shell 0.228475 no
Casing DIF_stipe_skin 0.376873 no
Casing DIF_cap_skin 0.000613 yes
Casing DIF_cap_tissue 0.000613 yes
DIF_gill_tissue YFB_stipe_center 0.311370 no
DIF_gill_tissue YFB_stipe_shell 0.224601 no
DIF_gill_tissue YFB_stipe_skin 0.016386 yes
DIF_gill_tissue YFB_cap_skin 0.959000 no
DIF_gill_tissue YFB_cap_tissue 0.578393 no
DIF_gill_tissue YFB_gill_tissue 0.815337 no
DIF_gill_tissue YFB_veil 0.916889 no
YFB_stipe_center YFB_stipe_shell 0.943135 no
YFB_stipe_center YFB_stipe_skin 0.346713 no
YFB_stipe_center YFB_cap_skin 0.256120 no
YFB_stipe_center YFB_cap_tissue 0.051932 no
YFB_stipe_center YFB_gill_tissue 0.554576 no
YFB_stipe_center YFB_veil 0.444000 no
YFB_stipe_shell YFB_stipe_skin 0.423991 no
YFB_stipe_shell YFB_cap_skin 0.181080 no
YFB_stipe_shell YFB_cap_tissue 0.033211 yes
YFB_stipe_shell YFB_gill_tissue 0.444210 no
YFB_stipe_shell YFB_veil 0.342385 no
YFB_stipe_skin YFB_cap_skin 0.010728 yes
YFB_stipe_skin YFB_cap_tissue 0.000613 yes
YFB_stipe_skin YFB_gill_tissue 0.051723 no
YFB_stipe_skin YFB_veil 0.038278 yes
YFB_cap_skin YFB_cap_tissue 0.655782 no
YFB_cap_skin YFB_gill_tissue 0.753547 no
YFB_cap_skin YFB_veil 0.866745 no
YFB_cap_tissue YFB_gill_tissue 0.323963 no
YFB_cap_tissue YFB_veil 0.451012 no
YFB_gill_tissue YFB_veil 0.926541 no
Initials DIF_gill_tissue 0.000613 yes
Initials YFB_stipe_center 0.000613 yes
Initials YFB_stipe_shell 0.000613 yes
Initials YFB_stipe_skin 0.001140 yes
Initials YFB_cap_skin 0.000613 yes
Initials YFB_cap_tissue 0.000613 yes
Initials YFB_gill_tissue 0.000613 yes
Initials YFB_veil 0.000613 yes
Initials Pileal_Stipeal_center 0.000613 yes
Initials Pileal_Stipeal_shell 0.000613 yes
Initials DIF_stipe_center 0.000613 yes
Initials DIF_stipe_shell 0.000613 yes
Initials DIF_stipe_skin 0.000613 yes
Initials DIF_cap_skin 0.000613 yes
Initials DIF_cap_tissue 0.000613 yes
Pileal_Stipeal_center DIF_gill_tissue 0.194969 no
Pileal_Stipeal_center YFB_stipe_center 0.900570 no
Pileal_Stipeal_center YFB_stipe_shell 0.964179 no
Pileal_Stipeal_center YFB_stipe_skin 0.495633 no
Pileal_Stipeal_center YFB_cap_skin 0.155834 no
Pileal_Stipeal_center YFB_cap_tissue 0.026461 yes
Pileal_Stipeal_center YFB_gill_tissue 0.394653 no
Pileal_Stipeal_center YFB_veil 0.300784 no
Pileal_Stipeal_center Pileal_Stipeal_shell 0.352175 no
Pileal_Stipeal_center DIF_stipe_center 0.722737 no
Pileal_Stipeal_center DIF_stipe_shell 0.910865 no
Pileal_Stipeal_center DIF_stipe_skin 0.761942 no
Pileal_Stipeal_center DIF_cap_skin 0.061662 no
Pileal_Stipeal_center DIF_cap_tissue 0.060299 no
Pileal_Stipeal_shell DIF_gill_tissue 0.879051 no
Pileal_Stipeal_shell YFB_stipe_center 0.502327 no
Pileal_Stipeal_shell YFB_stipe_shell 0.397593 no
Pileal_Stipeal_shell YFB_stipe_skin 0.046952 yes
Pileal_Stipeal_shell YFB_cap_skin 0.825803 no
Pileal_Stipeal_shell YFB_cap_tissue 0.411844 no
Pileal_Stipeal_shell YFB_gill_tissue 0.958374 no
Pileal_Stipeal_shell YFB_veil 0.969283 no
Pileal_Stipeal_shell DIF_stipe_center 0.686330 no
Pileal_Stipeal_shell DIF_stipe_shell 0.231336 no
Pileal_Stipeal_shell DIF_stipe_skin 0.130530 no
Pileal_Stipeal_shell DIF_cap_skin 0.585506 no
Pileal_Stipeal_shell DIF_cap_tissue 0.575826 no
DIF_stipe_center DIF_gill_tissue 0.487984 no
DIF_stipe_center YFB_stipe_center 0.869142 no
DIF_stipe_center YFB_stipe_shell 0.785409 no
DIF_stipe_center YFB_stipe_skin 0.175906 no
DIF_stipe_center YFB_cap_skin 0.419263 no
DIF_stipe_center YFB_cap_tissue 0.108390 no
DIF_stipe_center YFB_gill_tissue 0.744807 no
DIF_stipe_center YFB_veil 0.633073 no
DIF_stipe_center DIF_stipe_shell 0.576722 no
DIF_stipe_center DIF_stipe_skin 0.394895 no
DIF_stipe_center DIF_cap_skin 0.208222 no
DIF_stipe_center DIF_cap_tissue 0.203039 no
DIF_stipe_shell DIF_gill_tissue 0.108700 no
DIF_stipe_shell YFB_stipe_center 0.775690 no
DIF_stipe_shell YFB_stipe_shell 0.861706 no
DIF_stipe_shell YFB_stipe_skin 0.626699 no
DIF_stipe_shell YFB_cap_skin 0.086914 no
DIF_stipe_shell YFB_cap_tissue 0.013782 yes
DIF_stipe_shell YFB_gill_tissue 0.256331 no
DIF_stipe_shell YFB_veil 0.192529 no
DIF_stipe_shell DIF_stipe_skin 0.878139 no
DIF_stipe_shell DIF_cap_skin 0.031323 yes
DIF_stipe_shell DIF_cap_tissue 0.028193 yes
DIF_stipe_skin DIF_gill_tissue 0.056958 no
DIF_stipe_skin YFB_stipe_center 0.606318 no
DIF_stipe_skin YFB_stipe_shell 0.697827 no
DIF_stipe_skin YFB_stipe_skin 0.815642 no
DIF_stipe_skin YFB_cap_skin 0.041164 yes
DIF_stipe_skin YFB_cap_tissue 0.004548 yes
DIF_stipe_skin YFB_gill_tissue 0.152189 no
DIF_stipe_skin YFB_veil 0.110863 no
DIF_stipe_skin DIF_cap_skin 0.015242 yes
DIF_stipe_skin DIF_cap_tissue 0.012577 yes
DIF_cap_skin DIF_gill_tissue 0.763782 no
DIF_cap_skin YFB_stipe_center 0.113653 no
DIF_cap_skin YFB_stipe_shell 0.073043 no
DIF_cap_skin YFB_stipe_skin 0.002084 yes
DIF_cap_skin YFB_cap_skin 0.826248 no
DIF_cap_skin YFB_cap_tissue 0.886688 no
DIF_cap_skin YFB_gill_tissue 0.500671 no
DIF_cap_skin YFB_veil 0.633925 no
DIF_cap_skin DIF_cap_tissue 0.992414 no
DIF_cap_tissue DIF_gill_tissue 0.751734 no
DIF_cap_tissue YFB_stipe_center 0.112576 no
DIF_cap_tissue YFB_stipe_shell 0.075556 no
DIF_cap_tissue YFB_stipe_skin 0.004160 yes
DIF_cap_tissue YFB_cap_skin 0.814101 no
DIF_cap_tissue YFB_cap_tissue 0.893201 no
DIF_cap_tissue YFB_gill_tissue 0.488748 no
DIF_cap_tissue YFB_veil 0.621975 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|102990
MAKARDTYMVIGGCGFLGHHIVQQLLARGDSVCIFDLVQRHFDVPFYSGDITNVDDVSSALRKSGTSCIIHTASP
PAGLKNEALYYKVNVEGTKSVIAAAVSTGVRKLVFTSSAGVVFNGADLINVDERLPYPEVPLDAYNDSKAKAEEV
VLEANGKDGLLTVALRPAGIFGPGDRQVMAGMYQVYERNQTHFQIGDNTNLFDFTYVGNVAKAHLLAADKLDIPP
PAPPLCDTREDALLAEDVPPFTSEEEKLISAPLPFVAATTGKHRIPTSEARPLGPYIELPPNGREIEAAFNDPNE
ELSGRPAIRTRFDQFSGVSLVMAKLRNTQINPLQVAGQAFFITNGEPCYFWDFARMIWHQLDAHFPGHRKRRDVF
KLSKDIGLIAASGAELYGKLVGKEPAFTRFKVSFSCATRWHNIEKARRILDYEPDVGLDEGVQRMVQWWYEEYQK
GNHTQKH*
Coding >AgabiH97|102990
ATGGCTAAGGCAAGGGACACCTACATGGTCATTGGTGGCTGCGGCTTCCTGGGCCACCACATCGTCCAGCAACTT
CTCGCCAGAGGTGACTCGGTGTGCATCTTCGACTTGGTCCAACGACATTTTGATGTCCCGTTCTACTCTGGCGAC
ATCACAAACGTCGACGACGTCTCCAGCGCATTAAGAAAGAGCGGCACAAGCTGTATTATCCACACTGCTTCTCCG
CCTGCAGGCTTAAAGAATGAGGCACTCTACTACAAAGTCAATGTCGAGGGTACAAAATCTGTAATTGCAGCTGCA
GTATCCACTGGTGTACGAAAACTCGTATTCACCAGTTCTGCGGGTGTTGTATTCAATGGCGCAGACCTTATCAAC
GTAGACGAACGGCTGCCCTACCCCGAAGTTCCCCTTGATGCTTACAACGACTCCAAGGCCAAAGCGGAGGAAGTG
GTCCTTGAAGCCAATGGAAAGGATGGCCTCCTAACTGTTGCCTTGAGACCTGCCGGAATTTTTGGGCCCGGTGAC
CGGCAGGTCATGGCGGGGATGTATCAAGTGTATGAACGCAATCAGACCCACTTTCAAATTGGTGACAATACCAAT
CTTTTCGATTTCACATATGTAGGGAACGTTGCGAAAGCTCATCTTCTCGCTGCCGACAAACTCGACATCCCACCG
CCCGCACCACCTCTTTGCGATACCAGAGAAGATGCTTTATTAGCTGAGGACGTACCCCCATTTACGTCGGAGGAA
GAGAAGCTCATTAGTGCTCCCTTGCCCTTCGTAGCGGCGACAACAGGCAAGCATCGTATACCCACAAGTGAAGCA
CGTCCCCTTGGGCCCTACATTGAACTGCCACCCAATGGCCGAGAGATTGAAGCCGCTTTCAATGATCCGAATGAG
GAACTTTCGGGTCGACCCGCCATTCGCACTCGTTTTGACCAATTCTCCGGCGTATCCCTGGTGATGGCTAAACTT
CGGAATACCCAAATCAACCCTCTGCAAGTCGCCGGCCAAGCATTTTTCATCACTAATGGTGAACCATGCTATTTC
TGGGACTTTGCACGGATGATTTGGCACCAGTTGGATGCCCACTTCCCGGGCCATCGAAAGCGAAGAGATGTATTC
AAGCTGTCCAAAGACATTGGGCTCATCGCTGCTAGCGGAGCCGAGCTTTATGGAAAGCTTGTCGGCAAAGAACCT
GCTTTTACGAGGTTTAAAGTCAGCTTTAGCTGTGCTACGCGGTGGCATAATATAGAAAAGGCGCGACGTATCCTT
GACTACGAGCCTGATGTTGGTCTGGATGAAGGAGTTCAGCGTATGGTTCAGTGGTGGTATGAAGAATATCAGAAG
GGTAACCACACGCAGAAACACTAG
Transcript >AgabiH97|102990
ATGGCTAAGGCAAGGGACACCTACATGGTCATTGGTGGCTGCGGCTTCCTGGGCCACCACATCGTCCAGCAACTT
CTCGCCAGAGGTGACTCGGTGTGCATCTTCGACTTGGTCCAACGACATTTTGATGTCCCGTTCTACTCTGGCGAC
ATCACAAACGTCGACGACGTCTCCAGCGCATTAAGAAAGAGCGGCACAAGCTGTATTATCCACACTGCTTCTCCG
CCTGCAGGCTTAAAGAATGAGGCACTCTACTACAAAGTCAATGTCGAGGGTACAAAATCTGTAATTGCAGCTGCA
GTATCCACTGGTGTACGAAAACTCGTATTCACCAGTTCTGCGGGTGTTGTATTCAATGGCGCAGACCTTATCAAC
GTAGACGAACGGCTGCCCTACCCCGAAGTTCCCCTTGATGCTTACAACGACTCCAAGGCCAAAGCGGAGGAAGTG
GTCCTTGAAGCCAATGGAAAGGATGGCCTCCTAACTGTTGCCTTGAGACCTGCCGGAATTTTTGGGCCCGGTGAC
CGGCAGGTCATGGCGGGGATGTATCAAGTGTATGAACGCAATCAGACCCACTTTCAAATTGGTGACAATACCAAT
CTTTTCGATTTCACATATGTAGGGAACGTTGCGAAAGCTCATCTTCTCGCTGCCGACAAACTCGACATCCCACCG
CCCGCACCACCTCTTTGCGATACCAGAGAAGATGCTTTATTAGCTGAGGACGTACCCCCATTTACGTCGGAGGAA
GAGAAGCTCATTAGTGCTCCCTTGCCCTTCGTAGCGGCGACAACAGGCAAGCATCGTATACCCACAAGTGAAGCA
CGTCCCCTTGGGCCCTACATTGAACTGCCACCCAATGGCCGAGAGATTGAAGCCGCTTTCAATGATCCGAATGAG
GAACTTTCGGGTCGACCCGCCATTCGCACTCGTTTTGACCAATTCTCCGGCGTATCCCTGGTGATGGCTAAACTT
CGGAATACCCAAATCAACCCTCTGCAAGTCGCCGGCCAAGCATTTTTCATCACTAATGGTGAACCATGCTATTTC
TGGGACTTTGCACGGATGATTTGGCACCAGTTGGATGCCCACTTCCCGGGCCATCGAAAGCGAAGAGATGTATTC
AAGCTGTCCAAAGACATTGGGCTCATCGCTGCTAGCGGAGCCGAGCTTTATGGAAAGCTTGTCGGCAAAGAACCT
GCTTTTACGAGGTTTAAAGTCAGCTTTAGCTGTGCTACGCGGTGGCATAATATAGAAAAGGCGCGACGTATCCTT
GACTACGAGCCTGATGTTGGTCTGGATGAAGGAGTTCAGCGTATGGTTCAGTGGTGGTATGAAGAATATCAGAAG
GGTAACCACACGCAGAAACACTAG
Gene >AgabiH97|102990
ATGGCTAAGGCAAGGGACACCTACATGGTCATTGGTGGCTGCGGCTTCCTGGGCCACCACATCGTCCAGCAACTT
CTCGCCAGAGGTGACTCGGTGTGCATCTTCGACTTGGTCCAACGACATTTTGATGTCCCGTTCTACTCTGGCGAC
ATCACAAACGTCGACGACGTCTCCAGCGCATTAAGAAAGGCACGTTCTCTCATTCACTGTTGAGGTCAATACTGA
CTGTACTCAGAGCGGCACAAGCTGTATTATCCACACTGCTTCTCCGCCTGCAGGCTTAAAGAATGAGGCACTCTA
CTACAAAGTCAATGTCGAGGGTACAAAATCTGTAATTGCAGCTGCAGTATCCACTGGTGTACGAAAACTCGTATT
CACCAGTTCTGCGGGTGTTGTATTCAATGGCGCAGACCTTATCAACGTAGACGAACGGCTGCCCTACCCCGAAGT
TCCCCTTGATGCTTACAACGACTCCAAGGCCAAAGCGGAGGAAGTGGTCCTTGAAGCCAATGGAAAGGATGGCCT
CCTAACTGTTGCCTTGAGACCTGCCGGAATTTTTGGGTCAGTTTCACTTCCACGTGGTACATTTGACGTTTTGCC
GACTATTTTTCTAGGCCCGGTGACCGGCAGGTCATGGCGGGGATGTATCAAGTGTATGAACGCAATCAGACCCAC
TTTCAAATTGGTGACAATACCAATCTTTTCGATTTCACATATGTAGGGAACGTTGCGAAAGCTCATCTTCTCGCT
GCCGACAAACTCGACATCCCACCGCCCGCACCACCTCTTTGCGATACCAGAGAAGATGCTTTATTAGCTGAGGAC
GTACCCCCATTTACGTCGGAGGAAGAGAAGCTCATTAGTGCTCCCTTGCCCTTCGTAGCGGCGACAACAGGCAAG
CATCGTATACCCACAAGTGAAGCACGTCCCCTTGGGCCCTACATTGAACTGCCACCCAATGGCCGAGAGATTGAA
GCCGCTTTCAATGATCCGAATGAGGAACTTTCGGGTCGACCCGCCATTCGCACTCGTTTTGACCAATTCTCCGGC
GTATCCCTGGTGATGGCTAAACTTCGGAATACCCAAATCAACCCTCTGCAAGTCGCCGGCCAAGCATTTTTCATC
ACTAATGGTGAACCATGCTATTTCTGGGACTTTGCACGGATGATTTGGCACCAGTTGGATGCCCACTTCCCGGGC
CATCGAAAGCGAAGAGATGTATTCAAGCTGTCCAAAGACATTGGGCTCATCGCTGCTAGCGGAGCCGAGCTTTAT
GGAAAGCTTGTCGGCAAAGAACCTGCTTTTACGAGGTTTAAAGTCAGCTTTAGCTGTGCTACGCGGTGGCATAAT
ATAGAAAAGGCGCGACGTATCCTTGACTACGAGCCTGATGTTGGTCTGGATGAAGGAGTTCAGCGTATGGTTCAG
GTGAGTTGGATCTCTCAGACGTTGAATGAATCCGGTACTGATTCTGTGAGCAGTGGTGGTATGAAGAATATCAGA
AGGGTAACCACACGCAGAAACACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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