© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|102770 |
| Gene name | |
| Location | scaffold_7:1435952..1437528 |
| Strand | + |
| Gene length (bp) | 1576 |
| Transcript length (bp) | 1083 |
| Coding sequence length (bp) | 1083 |
| Protein length (aa) | 361 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05368 | NmrA | NmrA-like family | 1.3E-11 | 43 | 200 |
| PF13460 | NAD_binding_10 | NAD(P)H-binding | 3.6E-11 | 47 | 170 |
| PF01370 | Epimerase | NAD dependent epimerase/dehydratase family | 5.2E-10 | 43 | 154 |
| PF01073 | 3Beta_HSD | 3-beta hydroxysteroid dehydrogenase/isomerase family | 6.6E-10 | 45 | 161 |
| PF04321 | RmlD_sub_bind | RmlD substrate binding domain | 1.7E-06 | 43 | 198 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P25284|NDUA9_NEUCR | NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo40 PE=1 SV=2 | 9 | 344 | 4.0E-86 |
| sp|Q0MQB3|NDUA9_GORGO | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFA9 PE=2 SV=2 | 27 | 337 | 4.0E-70 |
| sp|Q5BK63|NDUA9_RAT | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Rattus norvegicus GN=Ndufa9 PE=1 SV=2 | 27 | 337 | 5.0E-70 |
| sp|Q16795|NDUA9_HUMAN | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Homo sapiens GN=NDUFA9 PE=1 SV=2 | 27 | 337 | 1.0E-69 |
| sp|Q0MQB4|NDUA9_PANTR | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pan troglodytes GN=NDUFA9 PE=2 SV=1 | 27 | 337 | 4.0E-69 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P25284|NDUA9_NEUCR | NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo40 PE=1 SV=2 | 9 | 344 | 4.0E-86 |
| sp|Q0MQB3|NDUA9_GORGO | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFA9 PE=2 SV=2 | 27 | 337 | 4.0E-70 |
| sp|Q5BK63|NDUA9_RAT | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Rattus norvegicus GN=Ndufa9 PE=1 SV=2 | 27 | 337 | 5.0E-70 |
| sp|Q16795|NDUA9_HUMAN | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Homo sapiens GN=NDUFA9 PE=1 SV=2 | 27 | 337 | 1.0E-69 |
| sp|Q0MQB4|NDUA9_PANTR | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pan troglodytes GN=NDUFA9 PE=2 SV=1 | 27 | 337 | 4.0E-69 |
| sp|P0CB82|NDUA9_PONPY | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pongo pygmaeus GN=NDUFA9 PE=2 SV=1 | 27 | 337 | 7.0E-69 |
| sp|P0CB81|NDUA9_PONAB | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pongo abelii GN=NDUFA9 PE=2 SV=1 | 27 | 337 | 7.0E-69 |
| sp|P34943|NDUA9_BOVIN | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Bos taurus GN=NDUFA9 PE=1 SV=1 | 7 | 337 | 2.0E-66 |
| sp|Q9DC69|NDUA9_MOUSE | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Mus musculus GN=Ndufa9 PE=1 SV=2 | 27 | 337 | 5.0E-64 |
| sp|Q9SK66|NDUA9_ARATH | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Arabidopsis thaliana GN=At2g20360 PE=1 SV=2 | 31 | 336 | 1.0E-53 |
| sp|Q559Z0|NDUA9_DICDI | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Dictyostelium discoideum GN=ndufa9 PE=3 SV=1 | 8 | 261 | 1.0E-49 |
| sp|Q0DWQ7|CCB12_ORYSJ | Cyclin-B1-2 OS=Oryza sativa subsp. japonica GN=CYCB1-2 PE=3 SV=1 | 146 | 284 | 4.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | Yes |
| GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | Yes |
| GO:0006694 | steroid biosynthetic process | Yes |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | No |
| GO:0009058 | biosynthetic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0016229 | steroid dehydrogenase activity | No |
| GO:0008202 | steroid metabolic process | No |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | No |
| GO:0008152 | metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:1901362 | organic cyclic compound biosynthetic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008610 | lipid biosynthetic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0006629 | lipid metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|102770 MLRLQRVSGVGKRTYHDLVNLPTQKPVISYGPPGYSAVSGHTVTVFGATGFLGRYLVSKLGKLGTQVIVPYRDED DARIFKPMGDLGQIVRMEWDIRNEQQIAECVRHSDIVFNLVGRDYETKNFKFGDVHVEGAERIAKVCAAEGVPRF VQVSHLNASATSQSKFYQTKAEGEERVKAAFPTATVMRPGPMYGYEDRLLNNMAFWSIWWKLNQAETRIRPVHVF DVAQALANQVANNVSGRTLSLPGPSTLTYEYLLDLISSVTLRPPSRAPMLPKPIALAAAKLAQSVWWPALSPDEV IRRYIDDSDVPGDWEVVGVNPTEIESHAIKYLRRYRTAENYVRPAVIPPRPSAKAIVEEY* |
| Coding | >AgabiH97|102770 ATGCTACGCTTACAGCGCGTTTCTGGCGTTGGAAAGCGAACATACCATGACCTCGTTAATCTTCCAACTCAGAAA CCAGTCATTTCTTATGGACCTCCTGGATATAGTGCTGTCTCTGGTCACACCGTTACAGTCTTTGGTGCAACTGGT TTCCTAGGTAGATACCTCGTGTCTAAACTTGGAAAACTAGGAACACAAGTGATTGTTCCCTACCGTGATGAAGAT GATGCAAGGATTTTTAAGCCTATGGGTGATTTGGGTCAGATCGTTCGAATGGAGTGGGATATTCGCAATGAGCAA CAGATTGCAGAATGCGTTCGACATTCGGATATCGTCTTTAACCTCGTTGGCCGCGATTACGAGACAAAGAACTTT AAATTTGGAGATGTCCATGTAGAAGGTGCCGAGCGCATCGCGAAGGTTTGCGCAGCAGAGGGTGTCCCACGTTTC GTTCAAGTCTCGCACTTGAATGCTTCTGCAACATCTCAATCGAAATTCTATCAGACTAAAGCAGAAGGTGAGGAG CGGGTAAAAGCCGCTTTCCCAACTGCGACTGTCATGCGACCCGGCCCCATGTACGGCTATGAGGATAGATTACTA AATAATATGGCATTTTGGTCTATCTGGTGGAAGCTCAACCAAGCGGAGACTAGAATACGCCCAGTCCATGTCTTC GACGTCGCTCAAGCTCTTGCCAATCAAGTGGCGAATAACGTCTCTGGGCGCACGTTATCGCTACCGGGACCATCT ACTCTCACGTACGAATACCTCCTCGACCTCATTTCTTCGGTGACTCTTCGGCCTCCTTCTCGGGCCCCCATGTTA CCGAAGCCCATTGCATTGGCTGCAGCCAAATTAGCACAGAGTGTGTGGTGGCCTGCCTTGAGTCCCGATGAGGTT ATTAGGCGTTATATCGACGATAGTGACGTTCCCGGTGACTGGGAAGTTGTCGGCGTAAATCCCACCGAAATTGAA TCCCACGCCATCAAGTATTTGAGACGCTACCGTACCGCAGAAAATTATGTTCGCCCTGCGGTGATTCCGCCGAGA CCGTCCGCCAAAGCCATTGTAGAGGAATATTAG |
| Transcript | >AgabiH97|102770 ATGCTACGCTTACAGCGCGTTTCTGGCGTTGGAAAGCGAACATACCATGACCTCGTTAATCTTCCAACTCAGAAA CCAGTCATTTCTTATGGACCTCCTGGATATAGTGCTGTCTCTGGTCACACCGTTACAGTCTTTGGTGCAACTGGT TTCCTAGGTAGATACCTCGTGTCTAAACTTGGAAAACTAGGAACACAAGTGATTGTTCCCTACCGTGATGAAGAT GATGCAAGGATTTTTAAGCCTATGGGTGATTTGGGTCAGATCGTTCGAATGGAGTGGGATATTCGCAATGAGCAA CAGATTGCAGAATGCGTTCGACATTCGGATATCGTCTTTAACCTCGTTGGCCGCGATTACGAGACAAAGAACTTT AAATTTGGAGATGTCCATGTAGAAGGTGCCGAGCGCATCGCGAAGGTTTGCGCAGCAGAGGGTGTCCCACGTTTC GTTCAAGTCTCGCACTTGAATGCTTCTGCAACATCTCAATCGAAATTCTATCAGACTAAAGCAGAAGGTGAGGAG CGGGTAAAAGCCGCTTTCCCAACTGCGACTGTCATGCGACCCGGCCCCATGTACGGCTATGAGGATAGATTACTA AATAATATGGCATTTTGGTCTATCTGGTGGAAGCTCAACCAAGCGGAGACTAGAATACGCCCAGTCCATGTCTTC GACGTCGCTCAAGCTCTTGCCAATCAAGTGGCGAATAACGTCTCTGGGCGCACGTTATCGCTACCGGGACCATCT ACTCTCACGTACGAATACCTCCTCGACCTCATTTCTTCGGTGACTCTTCGGCCTCCTTCTCGGGCCCCCATGTTA CCGAAGCCCATTGCATTGGCTGCAGCCAAATTAGCACAGAGTGTGTGGTGGCCTGCCTTGAGTCCCGATGAGGTT ATTAGGCGTTATATCGACGATAGTGACGTTCCCGGTGACTGGGAAGTTGTCGGCGTAAATCCCACCGAAATTGAA TCCCACGCCATCAAGTATTTGAGACGCTACCGTACCGCAGAAAATTATGTTCGCCCTGCGGTGATTCCGCCGAGA CCGTCCGCCAAAGCCATTGTAGAGGAATATTAG |
| Gene | >AgabiH97|102770 ATGCTACGCTTACAGCGCGTTTCTGGCGTTGGAAAGGTTCGTCTTTATTTTTCTCTACACGAGGCTAAATGGCTC ATCCCAATCCCGACAGCGAACATACCATGACCTCGTTAATCTTCCAACTCAGAAACCAGTCATTTCTTATGGACC TCCTGGATATAGTGCTGTCTCTGGTCACACCGTTACAGTCTTTGGTGCAACTGGTTTCCTAGGTAGATACCTCGT GTCTAAACTTGGTATGCAAGGTTTCTACCTCTGGATTTCTCGCGTTATTAAATTCTGCTTCACAGGAAAACTAGG AACACAAGTGATTGTTCCCTACCGTGATGAAGATGATGCAAGGATTTTTAAGCCTATGGGTGATTTGGGTCAGAT CGTTCGAATGGTAGCGTTCCAAATCCCTCGGCGTTTGGCTTGTGGTTCACGTTTTTGCTCCACGGTTCCGATAGG AGTGGGATATTCGCAATGAGCAACAGATTGCAGAATGCGTTCGACATTCGGATATCGTCTTTAACCTCGTTGGCC GCGATTACGAGACAAAGTGAGTACTCTTGTCAAACAACATATGTAGCTCCTCTTATTGGCTTGAAATCGTTTTCA ATATGTCGATTTTTCGATTTAGGAACTTTAAATTTGGAGATGTCCATGTAGAAGGTGCCGAGCGCATCGCGAAGG TTTGCGCAGCAGAGGGTGTCCCACGTTTCGTTCAAGTCTCGCACTTGAATGCTTCTGCAACATCTCAATCGAAAT TCTATCAGACTAAAGCAGAAGGTGAGGAGCGGGTAAAAGCCGCTTTCCCAACTGCGACTGTCATGCGACCCGGCC CCATGTACGGCTATGAGGATAGATTACTAAATAATATGGCATGTGAGTCTTCATTCAGCTACCCACCGGTACCGG TGCTTACAGAATATATTGTAGTTTGGTCTATCTGGTGGAAGCTCAACCAAGCGGAGACTAGAATACGCCCAGTCC ATGTAAGCTAACAATGGAACTAGCCATTGTTGTTCGCGACTTCTTGACGCTGTTATTTTATGTTGTAGGTCTTCG ACGTCGCTCAAGCTCTTGCCAATCAAGTGGCGAATAACGTCTCTGGGCGCACGTTATCGCTACCGGGACCATCTA CTCTCACGTACGAATACCTCCTCGACCTCATTTCTTCGGTGACTCTTCGGCCTCCTTCTCGGGCCCCCATGTTAC CGAAGCCCATTGCATTGGCTGCAGCCAAATTAGCACAGAGTGTGTGGTGGCCTGCCTTGAGTCCCGATGAGGTTA TTAGGCGTTATATCGACGATAGTGACGTTCCCGGTGACTGGGAAGTTGTCGGCGTAAATCCCACCGAAATTGAAT CCCACGCCATCAAGTATTTGAGACGCTACCGTACCGCGTATGTTTTGAAATGCGGTATCGAGATTGGGTACTCAT GATTGGATTATTGTAGAGAAAATTATGTTCGCCCTGCGGTGATTCCGCCGAGACCGTCCGCCAAAGCCATTGTAA GCGCGACTGTCTTTTTATCAACGTTACCTCTCTGATGTATAATTTGCTTCGTTGTTCAAAGGTAGAGGAATATTA G |