Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|102590
Gene name
Location	scaffold_7:1387979..1389661
Strand	+
Gene length (bp)	1682
Transcript length (bp)	1512
Coding sequence length (bp)	1512
Protein length (aa)	504

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13679	Methyltransf_32	Methyltransferase domain	5.3E-23	112	276

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q5E9V4\|RRNAD_BOVIN	Protein RRNAD1 OS=Bos taurus GN=RRNAD1 PE=2 SV=1	111	345	2.0E-10
sp\|Q96FB5\|RRNAD_HUMAN	Protein RRNAD1 OS=Homo sapiens GN=RRNAD1 PE=2 SV=2	111	345	3.0E-10
sp\|Q6AYG0\|RRNAD_RAT	Protein RRNAD1 OS=Rattus norvegicus GN=Rrnad1 PE=2 SV=1	109	461	5.0E-10
sp\|Q8BZG5\|RRNAD_MOUSE	Protein RRNAD1 OS=Mus musculus GN=Rrnad1 PE=2 SV=1	109	461	6.0E-10

GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 29	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|102590 MQDTIKKLGHLHAFLISSLVQFLLRSHPNDIATNPEADIIQGCCEWFFWCRENLDGWLEIVNYYMTACDRESTLP GDLRNILDEVRGLLLDRLPISLEGDFPQIEETGMSPKKVHEVSRMVAYILQIIRINKWDPSVLRIVDVGAGQGYL TRSLKAQLPQTKILALDADEAQTSGAQRWERRLLPLPSNENPPITHKTIHVTPEALYSTIDTWITEESLEGIDAK QEMLPVLLVGLHACGSLTPDVIKVLGQRSSGKTQWRIASMVVVGCCYNLMNPGDFPLSKSLKEKSPTIDLPVSAY HLAAQVPNHWLSSLSPPTPFPSVKLALRKVIWRALLGKKLRQNAPVNHPPVEINLTPGRQLPWSRLPTAKVHNFE LNEEGTGATPEMRRLGRLKDTAYTDWKTFVDVAEKKMGIDFGEKLKVVDRDMRMERLLECFHTLRCLVGTVVESA IILDRLVWVDELVKSEGRSDLRTSVVNLFDQATGSGRNVAIVVAQKVPSSTEV*
Coding	>AgabiH97\|102590 ATGCAAGACACTATAAAGAAACTCGGACATCTCCATGCGTTTCTTATATCATCGCTTGTACAGTTCTTACTCCGC TCACACCCCAATGACATTGCTACGAACCCAGAAGCAGATATTATTCAAGGCTGCTGCGAATGGTTCTTCTGGTGT CGCGAAAATCTCGATGGTTGGCTGGAGATAGTCAATTATTACATGACAGCCTGTGATAGGGAGTCAACATTGCCG GGCGACTTGAGAAATATTCTCGATGAGGTCAGAGGACTACTACTAGACCGACTTCCGATTTCATTGGAAGGTGAC TTTCCGCAAATTGAAGAGACTGGAATGTCACCAAAGAAAGTACACGAAGTATCTCGTATGGTCGCATATATCCTT CAAATCATTCGGATTAACAAATGGGACCCATCCGTGTTACGGATTGTGGATGTTGGGGCTGGCCAAGGCTATCTA ACGAGATCTTTGAAGGCTCAGTTACCACAAACAAAAATCCTTGCTTTGGATGCGGATGAAGCGCAGACAAGTGGA GCTCAACGTTGGGAAAGAAGATTGTTACCCCTTCCTTCGAATGAAAATCCGCCGATCACTCATAAAACTATACAC GTTACTCCGGAAGCCCTATATTCTACTATTGATACGTGGATTACAGAAGAGAGTCTAGAAGGGATTGATGCGAAG CAGGAGATGCTACCTGTTCTGCTCGTTGGTTTACACGCTTGTGGTTCTCTTACACCTGATGTCATAAAGGTATTG GGTCAGAGGTCTTCAGGAAAGACGCAATGGAGGATCGCTAGTATGGTGGTCGTTGGTTGCTGTTATAATCTTATG AACCCGGGAGACTTCCCTCTATCTAAGTCTCTCAAAGAGAAATCTCCAACAATCGACCTTCCGGTGTCAGCTTAT CATCTTGCGGCGCAGGTGCCGAATCATTGGCTTTCAAGTCTATCACCTCCTACACCTTTTCCTTCAGTCAAACTT GCACTTCGTAAAGTGATTTGGCGAGCTTTACTCGGGAAGAAATTGCGACAAAATGCACCAGTCAATCACCCACCG GTTGAAATAAACTTGACACCTGGACGACAACTTCCTTGGTCTCGATTACCGACTGCTAAAGTGCACAACTTTGAA TTGAATGAAGAGGGCACTGGTGCAACGCCTGAAATGCGTCGTCTCGGACGATTGAAGGATACCGCATATACCGAT TGGAAAACATTTGTAGATGTTGCTGAAAAGAAGATGGGTATAGACTTTGGAGAGAAGCTGAAAGTTGTGGATAGG GATATGAGGATGGAGCGCCTACTTGAATGTTTTCATACATTACGGTGTTTGGTGGGGACGGTAGTTGAGAGTGCT ATCATTCTTGACCGATTAGTGTGGGTAGATGAACTTGTAAAGAGCGAGGGACGATCGGATTTGCGGACTTCGGTC GTGAATTTGTTTGATCAGGCTACTGGAAGTGGGAGGAATGTGGCCATTGTGGTAGCGCAAAAGGTACCTTCATCA ACTGAGGTTTAA
Transcript	>AgabiH97\|102590 ATGCAAGACACTATAAAGAAACTCGGACATCTCCATGCGTTTCTTATATCATCGCTTGTACAGTTCTTACTCCGC TCACACCCCAATGACATTGCTACGAACCCAGAAGCAGATATTATTCAAGGCTGCTGCGAATGGTTCTTCTGGTGT CGCGAAAATCTCGATGGTTGGCTGGAGATAGTCAATTATTACATGACAGCCTGTGATAGGGAGTCAACATTGCCG GGCGACTTGAGAAATATTCTCGATGAGGTCAGAGGACTACTACTAGACCGACTTCCGATTTCATTGGAAGGTGAC TTTCCGCAAATTGAAGAGACTGGAATGTCACCAAAGAAAGTACACGAAGTATCTCGTATGGTCGCATATATCCTT CAAATCATTCGGATTAACAAATGGGACCCATCCGTGTTACGGATTGTGGATGTTGGGGCTGGCCAAGGCTATCTA ACGAGATCTTTGAAGGCTCAGTTACCACAAACAAAAATCCTTGCTTTGGATGCGGATGAAGCGCAGACAAGTGGA GCTCAACGTTGGGAAAGAAGATTGTTACCCCTTCCTTCGAATGAAAATCCGCCGATCACTCATAAAACTATACAC GTTACTCCGGAAGCCCTATATTCTACTATTGATACGTGGATTACAGAAGAGAGTCTAGAAGGGATTGATGCGAAG CAGGAGATGCTACCTGTTCTGCTCGTTGGTTTACACGCTTGTGGTTCTCTTACACCTGATGTCATAAAGGTATTG GGTCAGAGGTCTTCAGGAAAGACGCAATGGAGGATCGCTAGTATGGTGGTCGTTGGTTGCTGTTATAATCTTATG AACCCGGGAGACTTCCCTCTATCTAAGTCTCTCAAAGAGAAATCTCCAACAATCGACCTTCCGGTGTCAGCTTAT CATCTTGCGGCGCAGGTGCCGAATCATTGGCTTTCAAGTCTATCACCTCCTACACCTTTTCCTTCAGTCAAACTT GCACTTCGTAAAGTGATTTGGCGAGCTTTACTCGGGAAGAAATTGCGACAAAATGCACCAGTCAATCACCCACCG GTTGAAATAAACTTGACACCTGGACGACAACTTCCTTGGTCTCGATTACCGACTGCTAAAGTGCACAACTTTGAA TTGAATGAAGAGGGCACTGGTGCAACGCCTGAAATGCGTCGTCTCGGACGATTGAAGGATACCGCATATACCGAT TGGAAAACATTTGTAGATGTTGCTGAAAAGAAGATGGGTATAGACTTTGGAGAGAAGCTGAAAGTTGTGGATAGG GATATGAGGATGGAGCGCCTACTTGAATGTTTTCATACATTACGGTGTTTGGTGGGGACGGTAGTTGAGAGTGCT ATCATTCTTGACCGATTAGTGTGGGTAGATGAACTTGTAAAGAGCGAGGGACGATCGGATTTGCGGACTTCGGTC GTGAATTTGTTTGATCAGGCTACTGGAAGTGGGAGGAATGTGGCCATTGTGGTAGCGCAAAAGGTACCTTCATCA ACTGAGGTTTAA
Gene	>AgabiH97\|102590 ATGCAAGACACTATAAAGAAACTCGGACATCTCCATGCGTTTCTTATATCATCGCTTGTACAGTTCTTACTCCGC TCACACCCCAATGACATTGCTACGAACCCAGAAGCAGATATTATTCAAGGCTGCTGCGAATGGTTCTTCTGGTGT CGCGAAAATCTCGATGGTTGGCTGGAGATAGTCAATTATTACATGACAGCCTGTGATAGGTGCGTCCTTCAAAGT CCTTTCAAGTTCACTGTATAGAATTGTCAGGGAGTCAACATTGCCGGGCGACTTGAGAAATATTCTCGATGAGGT CAGAGGACTACTACTAGACCGACTTCCGATTTCATTGGAAGGTGACTTTCCGCAAATTGAAGAGACTGGAATGTC ACCAAAGAAAGTACACGAAGTATCTCGTATGGTCGCATATATCCTTCAAATCATTCGGATTAACAAATGGGACCC ATCCGTGTTACGGATTGTGGATGTTGGGGCTGGCCAAGTCTGTTCAAAATATTATTTTATCATTCGTGTGCTATG GATCAGTTAACCAGAATATCTTTCGCTACCTTAGGGCTATCTAACGAGATCTTTGAAGGCTCAGTTACCACAAAC AAAAATCCTTGCTTTGGATGCGGATGAAGCGCAGACAAGTGGAGCTCAACGTTGGGAAAGAAGATTGTTACCCCT TCCTTCGAATGAAAATCCGCCGATCACTCATAAAACTATACACGTTACTCCGGAAGCCCTATATTCTACTATTGA TACGTGGATTACAGAAGAGAGTCTAGAAGGGATTGATGCGAAGCAGGAGATGCTACCTGTTCTGCTCGTTGGTTT ACACGCTTGTGGTTCTCTTACACCTGATGTCATAAAGGTATTGGGTCAGAGGTCTTCAGGAAAGACGCAATGGAG GATCGCTAGTATGGTGGTCGTTGGTTGCTGTTATAATCTTATGAACCCGGGAGGTACGCGTTTCCTTTACGCCGC TAAACTTGATTGACTGACGTGTGTGTCAAGACTTCCCTCTATCTAAGTCTCTCAAAGAGAAATCTCCAACAATCG ACCTTCCGGTGTCAGCTTATCATCTTGCGGCGCAGGTGCCGAATCATTGGCTTTCAAGTCTATCACCTCCTACAC CTTTTCCTTCAGTCAAACTTGCACTTCGTAAAGTGATTTGGCGAGCTTTACTCGGGAAGAAATTGCGACAAAATG CACCAGTCAATCACCCACCGGTTGAAATAAACTTGACACCTGGACGACAACTTCCTTGGTCTCGATTACCGACTG CTAAAGTGCACAACTTTGAATTGAATGAAGAGGGCACTGGTGCAACGCCTGAAATGCGTCGTCTCGGACGATTGA AGGATACCGCATATACCGATTGGAAAACATTTGTAGATGTTGCTGAAAAGAAGATGGGTATAGACTTTGGAGAGA AGCTGAAAGTTGTGGATAGGGATATGAGGATGGAGCGCCTACTTGAATGTTTTCATACATTACGGTGTTTGGTGG GGACGGTAGTTGAGAGTGCTATCATTCTTGACCGATTAGTGTGGGTAGATGAACTTGTAAAGAGCGAGGGACGAT CGGATTTGCGGACTTCGGTCGTGAATTTGTTTGATCAGGCTACTGGAAGTGGGAGGAATGTGGCCATTGTGGTAG CGCAAAAGGTACCTTCATCAACTGAGGTTTAA

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