Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|102060
Gene name
Locationscaffold_7:1244929..1246502
Strand-
Gene length (bp)1573
Transcript length (bp)915
Coding sequence length (bp)915
Protein length (aa) 305

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20152 DUF6534 Family of unknown function (DUF6534) 7.2E-13 163 248

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane Transmembrane domain 0.0709 0.1445 0.1113 0.6064 0.0895 0.001 0.0693 0.3944 0.3512 0.0025

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 4 26 22
2 47 69 22
3 84 106 22
4 118 140 22
5 155 177 22
6 198 220 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup19
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|004100
Agaricus bisporus var bisporus H39 AgabiH39|406100
Agaricus bisporus var bisporus H39 AgabiH39|386300
Agaricus bisporus var bisporus H39 AgabiH39|386200
Agaricus bisporus var bisporus H39 AgabiH39|102060
Agaricus bisporus var bisporus H39 AgabiH39|095970
Agaricus bisporus var bisporus H39 AgabiH39|103490
Agaricus bisporus var bisporus H39 AgabiH39|095720
Agaricus bisporus var bisporus H39 AgabiH39|022930
Agaricus bisporus var bisporus H39 AgabiH39|020260
Agaricus bisporus var bisporus H39 AgabiH39|020250
Agaricus bisporus var bisporus H39 AgabiH39|095960
Agaricus bisporus var bisporus H97 AgabiH97|096260
Agaricus bisporus var bisporus H97 AgabiH97|103490
Agaricus bisporus var bisporus H97 AgabiH97|103480
Agaricus bisporus var bisporus H97 AgabiH97|103470
Agaricus bisporus var bisporus H97 AgabiH97|102060 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|096250
Agaricus bisporus var bisporus H97 AgabiH97|020260
Agaricus bisporus var bisporus H97 AgabiH97|095960
Agaricus bisporus var bisporus H97 AgabiH97|095720
Agaricus bisporus var bisporus H97 AgabiH97|022930
Agaricus bisporus var bisporus H97 AgabiH97|020250
Agaricus bisporus var bisporus H97 AgabiH97|004100
Agaricus bisporus var bisporus H97 AgabiH97|095970
Rhodonia placenta FPRL280 RhoplFPRL280|25_45
Rhodonia placenta FPRL280 RhoplFPRL280|168_9
Rhodonia placenta FPRL280 RhoplFPRL280|227_13
Rhodonia placenta FPRL280 RhoplFPRL280|435_5

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|102060
MLDIESTLGVLLIGVFINTYLYGVVSYQYAKYSVTFKKDPHWVKLMVFVLFLMDTVHSASIIYMVWTFAVKSFEG
GPASTNAYWPYPFTVLVMVCTACIVQGFFTYRIWKLTSQHTVACALAVLIVGAFVLGVTVAVRAWKLKPHTSIGP
FNSLLAAWLVMEVVVDASIAGILIYKLSMSKTGHKNSDSVLNRLIRMSVQTGFCTGVFAVLCLIFFFVMPRTQYF
AMFGIPISRVYTITFMDALLGRSGLRDLLFLDPDEVGRSASRGARTLSAAIRLQVTKEVYTVTDREVSEQAHEMK
VHRL*
Coding >AgabiH97|102060
ATGTTAGATATTGAGTCCACTTTGGGGGTTTTGTTAATTGGTGTATTCATTAATACCTACCTTTACGGTGTGGTT
TCATATCAATATGCGAAGTATTCGGTTACTTTCAAGAAAGACCCACATTGGGTTAAATTAATGGTCTTTGTTTTA
TTCCTAATGGACACTGTTCACAGTGCATCCATCATCTATATGGTCTGGACATTTGCTGTGAAGAGCTTTGAGGGG
GGCCCGGCTTCGACGAACGCGTATTGGCCGTACCCCTTTACAGTATTGGTTATGGTCTGCACAGCATGCATAGTT
CAGGGTTTCTTCACATATAGGATTTGGAAATTGACTTCCCAACATACTGTTGCATGTGCCCTTGCGGTACTGATA
GTAGGAGCTTTTGTCCTGGGCGTGACTGTCGCTGTCCGAGCATGGAAACTGAAACCCCATACGTCAATAGGACCG
TTCAACTCACTATTGGCAGCCTGGTTGGTGATGGAGGTTGTGGTTGATGCCTCCATCGCGGGCATTCTAATTTAC
AAACTTTCGATGTCGAAGACCGGGCATAAGAACTCGGACAGTGTCCTTAATAGACTGATCCGTATGTCGGTGCAA
ACGGGCTTTTGCACGGGAGTATTTGCTGTCTTATGTCTAATCTTTTTCTTCGTCATGCCTCGCACTCAATACTTT
GCGATGTTCGGTATACCGATCAGTCGCGTTTATACCATTACTTTCATGGATGCACTTCTAGGTCGTAGCGGGTTA
CGCGATCTACTATTTCTCGATCCAGATGAGGTGGGCCGTAGTGCAAGTCGAGGAGCACGTACTCTATCAGCCGCG
ATTCGTCTGCAAGTCACCAAAGAGGTTTACACCGTAACTGACAGAGAAGTATCTGAGCAAGCACATGAAATGAAG
GTTCACAGACTGTAG
Transcript >AgabiH97|102060
ATGTTAGATATTGAGTCCACTTTGGGGGTTTTGTTAATTGGTGTATTCATTAATACCTACCTTTACGGTGTGGTT
TCATATCAATATGCGAAGTATTCGGTTACTTTCAAGAAAGACCCACATTGGGTTAAATTAATGGTCTTTGTTTTA
TTCCTAATGGACACTGTTCACAGTGCATCCATCATCTATATGGTCTGGACATTTGCTGTGAAGAGCTTTGAGGGG
GGCCCGGCTTCGACGAACGCGTATTGGCCGTACCCCTTTACAGTATTGGTTATGGTCTGCACAGCATGCATAGTT
CAGGGTTTCTTCACATATAGGATTTGGAAATTGACTTCCCAACATACTGTTGCATGTGCCCTTGCGGTACTGATA
GTAGGAGCTTTTGTCCTGGGCGTGACTGTCGCTGTCCGAGCATGGAAACTGAAACCCCATACGTCAATAGGACCG
TTCAACTCACTATTGGCAGCCTGGTTGGTGATGGAGGTTGTGGTTGATGCCTCCATCGCGGGCATTCTAATTTAC
AAACTTTCGATGTCGAAGACCGGGCATAAGAACTCGGACAGTGTCCTTAATAGACTGATCCGTATGTCGGTGCAA
ACGGGCTTTTGCACGGGAGTATTTGCTGTCTTATGTCTAATCTTTTTCTTCGTCATGCCTCGCACTCAATACTTT
GCGATGTTCGGTATACCGATCAGTCGCGTTTATACCATTACTTTCATGGATGCACTTCTAGGTCGTAGCGGGTTA
CGCGATCTACTATTTCTCGATCCAGATGAGGTGGGCCGTAGTGCAAGTCGAGGAGCACGTACTCTATCAGCCGCG
ATTCGTCTGCAAGTCACCAAAGAGGTTTACACCGTAACTGACAGAGAAGTATCTGAGCAAGCACATGAAATGAAG
GTTCACAGACTGTAG
Gene >AgabiH97|102060
ATGTTAGATATTGAGTCCACTTTGGGTGAGATAGTTGTGATTATTATATGGATATAAGTTTGGACTCCGGGCTTA
CTTGTGACAGGGGTTTTGTTAATTGGTGTATTCAGTGCGTGGATTTGAGCCAATAACGTGGTTATGATTCTAACT
TGATCTTATATAGTTAATACCTACCTTTACGGTGTGGTTTCATATCAATATGCGAAGTATTCGGTTACTTGTGAG
CCTTTGACCACATCTGCACCATTGAGGCCGCTAATAAGTCTGGTTGCAGTCAAGAAAGACCCACATTGGGTTAAG
TTAGTGAAGTGATATATCCGAAATATTGCGACGCTGATTCCATGAGATGCTCAGATTAATGGTCTTTGTTTTATT
CCTAATGGACACTGTTCACAGTGCATCGTATGTACACCTTTCAGCGATGGAAATCTATCCATTCAGTAATACTAA
TGAATTTTGCAAGCATCATCTATATGGTCTGGACATTTGCGTGAGTTTTTGCGCGGGATAAACTTTTGGTCAAAC
CGTCAAAGCTCATATTTATCGACAGTGTGAAGAGCTTTGAGGGGGGCCCGGCTTCGACGAGTATGTATGCTGCCC
CCATGCAAGATTCAGGCTGCTGACAACGTCCTAAGACGCGTATTGGCCGTACCCCTTTACAGTATTGGTTATGGT
CTGCACAGCATGCATAGTTCAGGGTTTCTTCACATATAGGTCTGTCCAGCTCCTTCGTTTAGCCGGACACAAGAA
ATTGAATACACGAAGGATTTGGAAATTGACTTCCCAACATACTGTTGCATGTGCCCTTGCGGTACTGATAGTAGG
AGCTTTTGTCCTGGGCGTGACTGTCGCTGTCCGAGCATGGAAACTGAAACCGTTAGTTACCATGTCCAAGCCTGG
GCCGATGAAGTAACTGACTTCAGCGATAGCCATACGTCAATAGGACCGTTCAACTCACTATTGGCAGCCTGGTTG
GTGATGGAGGTTGTGGTTGATGCCTCCATCGCGGGCATTCTAATTTACAAACTTTCGATGTCGAAGACCGGGCAT
AAGAACTCGGACAGTGTCCTTAATAGACTGATCCGTATGTCGGTGCAAACGGGTAAGGTTTTCTACATTGTCGAT
TAGAAGAGTACGACCTGAAGACAATAATGTTATCCAGGCTTTTGCACGGGAGTATTTGCTGTCTTATGTCTAATC
TTTTTCTTCGTCATGCCTCGCACTCAATACTTTGCGATGTTCGGTATACCGATCAGTCGCGTTTATACCATTGTA
AAGCATTCATATTGTCTAAGATGAATCATGATTAACGACATGCACAGACTTTCATGGATGCACTTCTAGGTCGTA
GCGGGTTACGCGATCTACTATTTCTCGATCCAGATGAGGTGAATTCCGTTTCCAACGCTTCTTTTGGCAACACTC
ATGGTTCTTGCAGGTGGGCCGTAGTGCAAGTCGAGGAGCACGTACTCTATCAGCCGCGATTCGTCTGCAAGTCAC
CAAAGAGGTTTACACCGTAACTGACAGAGAAGTATCTGAGCAAGCACATGAAATGAAGGTTCACAGACTGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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