Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Aspergillus niger CBS 112.32 Aspergillus niger CBS 113.50 Aspergillus niger CBS 115988 Aspergillus niger CBS 115989 Aspergillus niger CBS 118.52 Aspergillus niger CBS 124.48 Aspergillus niger CBS 131.52 Aspergillus niger CBS 133816 Aspergillus niger CBS 147320 Aspergillus niger CBS 147321 Aspergillus niger CBS 147322 Aspergillus niger CBS 147323 Aspergillus niger CBS 147324 Aspergillus niger CBS 147343 Aspergillus niger CBS 147344 Aspergillus niger CBS 147345 Aspergillus niger CBS 147346 Aspergillus niger CBS 147347 Aspergillus niger CBS 147352 Aspergillus niger CBS 147353 Aspergillus niger CBS 147371 Aspergillus niger CBS 147482 Aspergillus niger CBS 630.78 Aspergillus niger CBS 769.97 Niveomyces coronatus CBS 149186 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280 Torrubiellomyces zombiae CBS 149187

General Properties

Protein ID	AgabiH97|101510
Gene name
Location	scaffold_7:1115017..1116252
Strand	+
Gene length (bp)	1235
Transcript length (bp)	1122
Coding sequence length (bp)	1122
Protein length (aa)	374

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF07859	Abhydrolase_3	alpha/beta hydrolase fold	5.2E-10	45	167
PF12697	Abhydrolase_6	Alpha/beta hydrolase family	2.9E-10	45	353

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0016787	hydrolase activity	Yes
GO:0003824	catalytic activity	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 45	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
Casing	Casing mycelium	12.02	5.89	18.15
Initials	Initials knots	13.17	6.52	19.81
Pileal_Stipeal_center	Stage I stipe center	23.06	12.30	33.82
Pileal_Stipeal_shell	Stage I stipe shell	20.55	10.83	30.28
DIF_stipe_center	Stage II stipe center	29.18	16.07	42.29
DIF_stipe_shell	Stage II stipe shell	23.22	12.48	33.96
DIF_stipe_skin	Stage II stipe skin	16.69	8.58	24.80
DIF_cap_skin	Stage II cap skin	15.53	7.87	23.19
DIF_cap_tissue	Stage II cap tissue	19.54	10.25	28.83
DIF_gill_tissue	Stage II gill tissue	24.87	13.38	36.36
YFB_stipe_center	Young fruiting body stipe center	10.47	4.85	16.09
YFB_stipe_shell	Young fruiting body stipe shell	12.61	6.15	19.07
YFB_stipe_skin	Young fruiting body stipe skin	17.08	8.72	25.43
YFB_cap_skin	Young fruiting body cap skin	10.92	5.19	16.66
YFB_cap_tissue	Young fruiting body cap tissue	5.91	2.43	9.38
YFB_gill_tissue	Young fruiting body gill tissue	15.65	7.81	23.50
YFB_veil	Young fruiting body veil	16.84	8.47	25.22

Differential expression

Label1	Label2	Q-value	Significant difference
Casing	DIF_gill_tissue	0.018344	yes
Casing	YFB_stipe_center	0.811310	no
Casing	YFB_stipe_shell	0.942449	no
Casing	YFB_stipe_skin	0.379747	no
Casing	YFB_cap_skin	0.876933	no
Casing	YFB_cap_tissue	0.058732	no
Casing	YFB_gill_tissue	0.555552	no
Casing	YFB_veil	0.395957	no
Casing	Initials	0.882024	no
Casing	Pileal_Stipeal_center	0.039165	yes
Casing	Pileal_Stipeal_shell	0.108700	no
Casing	DIF_stipe_center	0.003765	yes
Casing	DIF_stipe_shell	0.037364	yes
Casing	DIF_stipe_skin	0.416825	no
Casing	DIF_cap_skin	0.559018	no
Casing	DIF_cap_tissue	0.166978	no
DIF_gill_tissue	YFB_stipe_center	0.006742	yes
DIF_gill_tissue	YFB_stipe_shell	0.031088	yes
DIF_gill_tissue	YFB_stipe_skin	0.310112	no
DIF_gill_tissue	YFB_cap_skin	0.008457	yes
DIF_gill_tissue	YFB_cap_tissue	0.000613	yes
DIF_gill_tissue	YFB_gill_tissue	0.188780	no
DIF_gill_tissue	YFB_veil	0.274660	no
YFB_stipe_center	YFB_stipe_shell	0.729192	no
YFB_stipe_center	YFB_stipe_skin	0.204349	no
YFB_stipe_center	YFB_cap_skin	0.952868	no
YFB_stipe_center	YFB_cap_tissue	0.165549	no
YFB_stipe_center	YFB_gill_tissue	0.335521	no
YFB_stipe_center	YFB_veil	0.209955	no
YFB_stipe_shell	YFB_stipe_skin	0.471635	no
YFB_stipe_shell	YFB_cap_skin	0.795974	no
YFB_stipe_shell	YFB_cap_tissue	0.038047	yes
YFB_stipe_shell	YFB_gill_tissue	0.654742	no
YFB_stipe_shell	YFB_veil	0.490229	no
YFB_stipe_skin	YFB_cap_skin	0.235071	no
YFB_stipe_skin	YFB_cap_tissue	0.003365	yes
YFB_stipe_skin	YFB_gill_tissue	0.888263	no
YFB_stipe_skin	YFB_veil	0.984026	no
YFB_cap_skin	YFB_cap_tissue	0.121717	no
YFB_cap_skin	YFB_gill_tissue	0.391346	no
YFB_cap_skin	YFB_veil	0.252836	no
YFB_cap_tissue	YFB_gill_tissue	0.002951	yes
YFB_cap_tissue	YFB_veil	0.000613	yes
YFB_gill_tissue	YFB_veil	0.908888	no
Initials	DIF_gill_tissue	0.045273	yes
Initials	YFB_stipe_center	0.644700	no
Initials	YFB_stipe_shell	0.948175	no
Initials	YFB_stipe_skin	0.563933	no
Initials	YFB_cap_skin	0.722673	no
Initials	YFB_cap_tissue	0.029164	yes
Initials	YFB_gill_tissue	0.744180	no
Initials	YFB_veil	0.587019	no
Initials	Pileal_Stipeal_center	0.088950	no
Initials	Pileal_Stipeal_shell	0.220104	no
Initials	DIF_stipe_center	0.009123	yes
Initials	DIF_stipe_shell	0.083501	no
Initials	DIF_stipe_skin	0.607731	no
Initials	DIF_cap_skin	0.750149	no
Initials	DIF_cap_tissue	0.295435	no
Pileal_Stipeal_center	DIF_gill_tissue	0.893619	no
Pileal_Stipeal_center	YFB_stipe_center	0.018344	yes
Pileal_Stipeal_center	YFB_stipe_shell	0.060299	no
Pileal_Stipeal_center	YFB_stipe_skin	0.451992	no
Pileal_Stipeal_center	YFB_cap_skin	0.016949	yes
Pileal_Stipeal_center	YFB_cap_tissue	0.000613	yes
Pileal_Stipeal_center	YFB_gill_tissue	0.298330	no
Pileal_Stipeal_center	YFB_veil	0.416361	no
Pileal_Stipeal_center	Pileal_Stipeal_shell	0.827477	no
Pileal_Stipeal_center	DIF_stipe_center	0.564908	no
Pileal_Stipeal_center	DIF_stipe_shell	0.989540	no
Pileal_Stipeal_center	DIF_stipe_skin	0.402522	no
Pileal_Stipeal_center	DIF_cap_skin	0.271748	no
Pileal_Stipeal_center	DIF_cap_tissue	0.732538	no
Pileal_Stipeal_shell	DIF_gill_tissue	0.682746	no
Pileal_Stipeal_shell	YFB_stipe_center	0.049674	yes
Pileal_Stipeal_shell	YFB_stipe_shell	0.161831	no
Pileal_Stipeal_shell	YFB_stipe_skin	0.707534	no
Pileal_Stipeal_shell	YFB_cap_skin	0.051932	no
Pileal_Stipeal_shell	YFB_cap_tissue	0.000613	yes
Pileal_Stipeal_shell	YFB_gill_tissue	0.532035	no
Pileal_Stipeal_shell	YFB_veil	0.674277	no
Pileal_Stipeal_shell	DIF_stipe_center	0.336942	no
Pileal_Stipeal_shell	DIF_stipe_shell	0.818638	no
Pileal_Stipeal_shell	DIF_stipe_skin	0.655687	no
Pileal_Stipeal_shell	DIF_cap_skin	0.503004	no
Pileal_Stipeal_shell	DIF_cap_tissue	0.937293	no
DIF_stipe_center	DIF_gill_tissue	0.738762	no
DIF_stipe_center	YFB_stipe_center	0.001625	yes
DIF_stipe_center	YFB_stipe_shell	0.004160	yes
DIF_stipe_center	YFB_stipe_skin	0.103317	no
DIF_stipe_center	YFB_cap_skin	0.002084	yes
DIF_stipe_center	YFB_cap_tissue	0.000613	yes
DIF_stipe_center	YFB_gill_tissue	0.051932	no
DIF_stipe_center	YFB_veil	0.080002	no
DIF_stipe_center	DIF_stipe_shell	0.584875	no
DIF_stipe_center	DIF_stipe_skin	0.081756	no
DIF_stipe_center	DIF_cap_skin	0.044631	yes
DIF_stipe_center	DIF_cap_tissue	0.249412	no
DIF_stipe_shell	DIF_gill_tissue	0.905419	no
DIF_stipe_shell	YFB_stipe_center	0.016669	yes
DIF_stipe_shell	YFB_stipe_shell	0.057747	no
DIF_stipe_shell	YFB_stipe_skin	0.439378	no
DIF_stipe_shell	YFB_cap_skin	0.017226	yes
DIF_stipe_shell	YFB_cap_tissue	0.000613	yes
DIF_stipe_shell	YFB_gill_tissue	0.288188	no
DIF_stipe_shell	YFB_veil	0.405428	no
DIF_stipe_shell	DIF_stipe_skin	0.390721	no
DIF_stipe_shell	DIF_cap_skin	0.261441	no
DIF_stipe_shell	DIF_cap_tissue	0.722094	no
DIF_stipe_skin	DIF_gill_tissue	0.268160	no
DIF_stipe_skin	YFB_stipe_center	0.220104	no
DIF_stipe_skin	YFB_stipe_shell	0.519036	no
DIF_stipe_skin	YFB_stipe_skin	0.973480	no
DIF_stipe_skin	YFB_cap_skin	0.267670	no
DIF_stipe_skin	YFB_cap_tissue	0.003765	yes
DIF_stipe_skin	YFB_gill_tissue	0.921094	no
DIF_stipe_skin	YFB_veil	0.988995	no
DIF_stipe_skin	DIF_cap_skin	0.905242	no
DIF_stipe_skin	DIF_cap_tissue	0.760791	no
DIF_cap_skin	DIF_gill_tissue	0.165935	no
DIF_cap_skin	YFB_stipe_center	0.321351	no
DIF_cap_skin	YFB_stipe_shell	0.662350	no
DIF_cap_skin	YFB_stipe_skin	0.874404	no
DIF_cap_skin	YFB_cap_skin	0.379661	no
DIF_cap_skin	YFB_cap_tissue	0.006032	yes
DIF_cap_skin	YFB_gill_tissue	0.989461	no
DIF_cap_skin	YFB_veil	0.893401	no
DIF_cap_skin	DIF_cap_tissue	0.608765	no
DIF_cap_tissue	DIF_gill_tissue	0.571670	no
DIF_cap_tissue	YFB_stipe_center	0.070862	no
DIF_cap_tissue	YFB_stipe_shell	0.227928	no
DIF_cap_tissue	YFB_stipe_skin	0.806433	no
DIF_cap_tissue	YFB_cap_skin	0.079305	no
DIF_cap_tissue	YFB_cap_tissue	0.000613	yes
DIF_cap_tissue	YFB_gill_tissue	0.637336	no
DIF_cap_tissue	YFB_veil	0.773898	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97|101510 MPQNLPPHTTLTYKSIGDHTTSLDVFPPIIRAVTGNITPHYVPALVFFHGGGLTVGTRKSWFAHWLHRRTTESGI TFISVDYQLMPPGTGHNVVSDIRDLFTFISGDNATFKTKVENTGDEIVCKIDINAIAVAGPSAGGLCAYLAAGIV QPKPKALLSLYGMGGDFLTPYYLEQKHEVFVSGREILDPNDFKEFLYPFSLPTLTGSELEYHPNDHPTPGLPANP RMRLGRLYLQLGNYLDYYTGDHSPSLSEVLRNKRREVLEDYRDSTTALRSEDWGAPLIPSGHRVLFPQLNVTPDW PEMLLVHGTDDYLVYLAESQNLKSIAEAAGVKVTLKTVEGKGHTFDLHPEAEVEFNDLFDEIKDFLKRKLVHP*
Coding	>AgabiH97|101510 ATGCCGCAGAATCTGCCTCCTCATACTACTTTGACATACAAGAGCATCGGAGACCACACGACTTCCTTGGATGTC TTCCCGCCTATTATCAGAGCAGTCACCGGTAATATCACGCCTCATTATGTCCCAGCACTCGTCTTTTTTCATGGT GGAGGGTTGACTGTCGGTACCCGCAAGAGTTGGTTCGCTCACTGGCTTCATAGAAGGACCACCGAATCAGGGATC ACATTCATATCCGTCGATTATCAACTTATGCCCCCTGGAACAGGACACAACGTGGTATCCGACATCCGAGATCTT TTTACCTTCATCAGCGGCGACAACGCTACGTTCAAGACAAAGGTGGAAAATACAGGCGATGAGATCGTTTGCAAA ATTGACATCAACGCTATCGCTGTGGCGGGTCCTAGTGCCGGTGGACTTTGTGCTTACCTTGCTGCTGGGATAGTC CAACCAAAACCGAAGGCCTTGCTATCGTTATACGGGATGGGTGGAGATTTCTTGACCCCTTACTATTTGGAACAA AAGCATGAAGTATTCGTCTCCGGTAGAGAGATACTAGACCCAAACGATTTCAAAGAATTCCTCTATCCATTTTCT TTACCGACGCTTACAGGCTCAGAACTCGAATATCACCCTAACGACCACCCGACTCCCGGACTTCCTGCAAATCCA CGAATGCGCCTCGGACGATTATATCTTCAGCTTGGGAACTATCTGGATTATTACACGGGAGATCATTCTCCCAGT CTCAGCGAAGTATTGCGAAATAAACGACGAGAAGTCTTGGAAGACTATAGAGACAGCACCACAGCGCTTCGATCA GAAGATTGGGGAGCTCCCTTAATTCCCTCTGGTCATCGAGTTTTGTTTCCTCAACTTAATGTCACTCCCGACTGG CCGGAAATGCTTCTTGTTCACGGAACGGACGACTACCTCGTTTACCTGGCAGAGTCGCAAAACTTGAAGAGCATA GCAGAAGCTGCCGGAGTAAAGGTTACTTTGAAAACGGTAGAAGGCAAAGGGCATACGTTTGATCTGCACCCAGAG GCAGAGGTTGAGTTTAATGACCTTTTCGACGAAATCAAGGACTTTTTGAAGAGGAAGTTGGTTCATCCCTAG
Transcript	>AgabiH97|101510 ATGCCGCAGAATCTGCCTCCTCATACTACTTTGACATACAAGAGCATCGGAGACCACACGACTTCCTTGGATGTC TTCCCGCCTATTATCAGAGCAGTCACCGGTAATATCACGCCTCATTATGTCCCAGCACTCGTCTTTTTTCATGGT GGAGGGTTGACTGTCGGTACCCGCAAGAGTTGGTTCGCTCACTGGCTTCATAGAAGGACCACCGAATCAGGGATC ACATTCATATCCGTCGATTATCAACTTATGCCCCCTGGAACAGGACACAACGTGGTATCCGACATCCGAGATCTT TTTACCTTCATCAGCGGCGACAACGCTACGTTCAAGACAAAGGTGGAAAATACAGGCGATGAGATCGTTTGCAAA ATTGACATCAACGCTATCGCTGTGGCGGGTCCTAGTGCCGGTGGACTTTGTGCTTACCTTGCTGCTGGGATAGTC CAACCAAAACCGAAGGCCTTGCTATCGTTATACGGGATGGGTGGAGATTTCTTGACCCCTTACTATTTGGAACAA AAGCATGAAGTATTCGTCTCCGGTAGAGAGATACTAGACCCAAACGATTTCAAAGAATTCCTCTATCCATTTTCT TTACCGACGCTTACAGGCTCAGAACTCGAATATCACCCTAACGACCACCCGACTCCCGGACTTCCTGCAAATCCA CGAATGCGCCTCGGACGATTATATCTTCAGCTTGGGAACTATCTGGATTATTACACGGGAGATCATTCTCCCAGT CTCAGCGAAGTATTGCGAAATAAACGACGAGAAGTCTTGGAAGACTATAGAGACAGCACCACAGCGCTTCGATCA GAAGATTGGGGAGCTCCCTTAATTCCCTCTGGTCATCGAGTTTTGTTTCCTCAACTTAATGTCACTCCCGACTGG CCGGAAATGCTTCTTGTTCACGGAACGGACGACTACCTCGTTTACCTGGCAGAGTCGCAAAACTTGAAGAGCATA GCAGAAGCTGCCGGAGTAAAGGTTACTTTGAAAACGGTAGAAGGCAAAGGGCATACGTTTGATCTGCACCCAGAG GCAGAGGTTGAGTTTAATGACCTTTTCGACGAAATCAAGGACTTTTTGAAGAGGAAGTTGGTTCATCCCTAG
Gene	>AgabiH97|101510 ATGCCGCAGAATCTGCCTCCTCATACTACTTTGACATACAAGAGCATCGGAGACCACACGACTTCCTTGGATGTC TTCCCGCCTATTATCAGAGCAGTCACCGGTAATATCACGCCTCATTATGTCCCAGCACTCGTCTTTTTTCATGGT GGAGGGTTGACTGTCGGTACCCGCAAGAGTTGGTTCGCTCACTGGCTTCATAGTGAGATGCGAGCATTTGTTCTG GAGTTCATTCATTCACACAAGTCATAGGAAGGACCACCGAATCAGGGATCACATTCATATCCGTCGATTATCAAC TTATGCCCCCTGGAACAGGACACAACGTGGTATCCGACATCCGAGATCTTTTTACCTTCATCAGCGGCGACAACG CTACGTTCAAGACAAAGGTGGAAAATACAGGCGATGAGATCGTTTGCAAAATTGACATCAACGCTATCGCTGTGG CGGGTCCTAGTGCCGGTGGACTTTGTGCTTACCTTGCTGCTGGGATAGTCCAACCAAAACCGAAGGCCTTGCTAT CGTTATACGGGATGGGTGGAGATTTCTTGGTGGGTGAAAGAAAATCTCTATATATGCGGAATAATATTGAAGCTC GGTTCTTTTGACTGCAGACCCCTTACTATTTGGAACAAAAGCATGAAGTATTCGTCTCCGGTAGAGAGATACTAG ACCCAAACGATTTCAAAGAATTCCTCTATCCATTTTCTTTACCGACGCTTACAGGCTCAGAACTCGAATATCACC CTAACGACCACCCGACTCCCGGACTTCCTGCAAATCCACGAATGCGCCTCGGACGATTATATCTTCAGCTTGGGA ACTATCTGGATTATTACACGGGAGATCATTCTCCCAGTCTCAGCGAAGTATTGCGAAATAAACGACGAGAAGTCT TGGAAGACTATAGAGACAGCACCACAGCGCTTCGATCAGAAGATTGGGGAGCTCCCTTAATTCCCTCTGGTCATC GAGTTTTGTTTCCTCAACTTAATGTCACTCCCGACTGGCCGGAAATGCTTCTTGTTCACGGAACGGACGACTACC TCGTTTACCTGGCAGAGTCGCAAAACTTGAAGAGCATAGCAGAAGCTGCCGGAGTAAAGGTTACTTTGAAAACGG TAGAAGGCAAAGGGCATACGTTTGATCTGCACCCAGAGGCAGAGGTTGAGTTTAATGACCTTTTCGACGAAATCA AGGACTTTTTGAAGAGGAAGTTGGTTCATCCCTAG