Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|101460
Gene name
Locationscaffold_7:1107155..1109365
Strand-
Gene length (bp)2210
Transcript length (bp)1785
Coding sequence length (bp)1785
Protein length (aa) 595

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF18158 AidB_N Adaptive response protein AidB N-terminal domain 9.8E-18 9 163
PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain 1.8E-16 296 460
PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain 1.7E-10 173 285
PF08028 Acyl-CoA_dh_2 Acyl-CoA dehydrogenase, C-terminal domain 8.8E-06 312 445

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9XWZ2|ACD11_CAEEL Acyl-CoA dehydrogenase family member 11 OS=Caenorhabditis elegans GN=acdh-11 PE=1 SV=1 6 590 2.0E-94
sp|P33224|AIDB_ECOLI Putative acyl-CoA dehydrogenase AidB OS=Escherichia coli (strain K12) GN=aidB PE=1 SV=3 8 458 7.0E-29
sp|Q5LLW7|DMDC_RUEPO 3-methylmercaptopropionyl-CoA dehydrogenase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=dmdC PE=1 SV=1 70 494 4.0E-26
sp|P45857|ACDB_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=mmgC PE=2 SV=3 143 463 8.0E-14
sp|C3UVB0|ACD_DESML Glutaryl-CoA dehydrogenase OS=Desulfococcus multivorans GN=Acd PE=1 SV=1 138 341 4.0E-13
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Swissprot ID Swissprot Description Start End E-value
sp|Q9XWZ2|ACD11_CAEEL Acyl-CoA dehydrogenase family member 11 OS=Caenorhabditis elegans GN=acdh-11 PE=1 SV=1 6 590 2.0E-94
sp|P33224|AIDB_ECOLI Putative acyl-CoA dehydrogenase AidB OS=Escherichia coli (strain K12) GN=aidB PE=1 SV=3 8 458 7.0E-29
sp|Q5LLW7|DMDC_RUEPO 3-methylmercaptopropionyl-CoA dehydrogenase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=dmdC PE=1 SV=1 70 494 4.0E-26
sp|P45857|ACDB_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=mmgC PE=2 SV=3 143 463 8.0E-14
sp|C3UVB0|ACD_DESML Glutaryl-CoA dehydrogenase OS=Desulfococcus multivorans GN=Acd PE=1 SV=1 138 341 4.0E-13
sp|Q8JZN5|ACAD9_MOUSE Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Mus musculus GN=Acad9 PE=1 SV=2 141 454 5.0E-12
sp|Q8HXY7|ACADV_MACFA Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=ACADVL PE=2 SV=1 141 454 8.0E-12
sp|G3KIM8|ACRC_CLOPR Acryloyl-CoA reductase (NADH) OS=Clostridium propionicum GN=acrC PE=1 SV=1 139 460 6.0E-11
sp|P45953|ACADV_RAT Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadvl PE=1 SV=1 133 454 1.0E-10
sp|P49748|ACADV_HUMAN Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADVL PE=1 SV=1 141 454 2.0E-10
sp|Q06319|ACDS_MEGEL Acyl-CoA dehydrogenase, short-chain specific OS=Megasphaera elsdenii PE=1 SV=1 40 451 3.0E-10
sp|Q9FS88|MBCD_SOLTU 2-methylacyl-CoA dehydrogenase, mitochondrial OS=Solanum tuberosum GN=2MBCD PE=1 SV=2 147 460 5.0E-10
sp|O34421|ACDC_BACSU Probable acyl-CoA dehydrogenase YngJ OS=Bacillus subtilis (strain 168) GN=yngJ PE=3 SV=1 146 460 6.0E-10
sp|P48818|ACADV_BOVIN Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADVL PE=2 SV=3 141 454 6.0E-10
sp|P50544|ACADV_MOUSE Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadvl PE=1 SV=3 133 454 8.0E-10
sp|Q0NXR6|ACAD8_BOVIN Isobutyryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACAD8 PE=2 SV=1 143 460 9.0E-10
sp|P45867|ACDA_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=acdA PE=2 SV=1 146 462 1.0E-08
sp|Q9FS87|IVD_SOLTU Isovaleryl-CoA dehydrogenase, mitochondrial OS=Solanum tuberosum GN=IVD PE=1 SV=2 147 460 1.0E-08
sp|Q2LQN9|CH1CO_SYNAS Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase OS=Syntrophus aciditrophicus (strain SB) GN=SYN_02587 PE=1 SV=1 133 460 3.0E-08
sp|Q9UKU7|ACAD8_HUMAN Isobutyryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACAD8 PE=1 SV=1 133 460 3.0E-08
sp|Q5RAS0|ACADS_PONAB Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=ACADS PE=2 SV=1 146 459 5.0E-08
sp|P16219|ACADS_HUMAN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADS PE=1 SV=1 146 459 8.0E-08
sp|Q75IM9|IVD_ORYSJ Isovaleryl-CoA dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os05g0125500 PE=2 SV=2 147 460 8.0E-08
sp|Q9H845|ACAD9_HUMAN Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Homo sapiens GN=ACAD9 PE=1 SV=1 141 454 1.0E-07
sp|Q07417|ACADS_MOUSE Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acads PE=1 SV=2 174 459 1.0E-07
sp|P70584|ACDSB_RAT Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadsb PE=1 SV=1 147 451 2.0E-07
sp|P15651|ACADS_RAT Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acads PE=1 SV=2 174 459 2.0E-07
sp|Q9DBL1|ACDSB_MOUSE Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadsb PE=1 SV=1 148 451 1.0E-06
sp|P34275|IVD_CAEEL Probable acyl-CoA dehydrogenase 6 OS=Caenorhabditis elegans GN=acdh-6 PE=3 SV=2 116 452 5.0E-06
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GO

GO Term Description Terminal node
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus|Peroxisome Peroxisomal targeting signal 0.3892 0.5521 0.0475 0.016 0.1373 0.0379 0.0245 0.042 0.0731 0.9082

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup732
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|101460
Agaricus bisporus var bisporus H97 AgabiH97|101460 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|111_5
Rhodonia placenta FPRL280 RhoplFPRL280|45_18
Rhodonia placenta FPRL280 RhoplFPRL280|52_13
Rhodonia placenta FPRL280 RhoplFPRL280|52_14
Rhodonia placenta FPRL280 RhoplFPRL280|88_9

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|101460
MRIEEGFQQIPFPQQNVYTSDTVLPALLKRLLPKSIFEEIEPDLVRLGNDVINRIRDLGAEAHPPKLVQYDQWGR
RVDELHTSEGWRNLKAIAQQEGIPAIFYERKYREHSRIYGFAKAALMAGDTHLVFCPLSMTDGAARTIELIGNQE
AKNDILPRLISRDPSVAFTAGQWMTERPGGSDVSLTETTAVSTGQSARYGPEYSLNGLKWFSSATDGDISVALAR
TGTVEAGSRGLSLFLIPVRLPLFPSPSEPKPTSTSNNIFLHRLKNKIGTHALPTAELTLEGAEGYLLGNLNQGVK
NITPVLNITRIWSSFHSVGNLRKCLGIATSYATVRRIQSGKVLLKDAPIHVAQLAEVNLLYRALCHFAFGAVELL
GKAECGSGNKEEQEDVQRRLRILTPVLKGYTTEKACSGMEEAMVALGGAGYMEENGFGLCIRDALVEKIWEGTTT
VLALDLVRSVADGKNLLAFISWACSIVASTPGVLTPGFEASFKLLDLAINELSTAYDAPISPLVPRPALLLVGSI
ASSIYLLEHAIWSHTHKELEADVDIEVFNRWIVQSGLEGYTEAVKKAKDAGKAGARVKANEKIVFGAKL*
Coding >AgabiH97|101460
ATGCGCATTGAAGAAGGCTTTCAACAGATTCCTTTTCCTCAACAAAATGTGTATACCTCGGACACGGTTCTCCCA
GCACTATTGAAGCGCTTGTTGCCCAAGAGTATATTTGAGGAAATCGAACCGGACCTCGTCCGCCTTGGAAACGAC
GTCATCAATCGCATTCGCGACCTGGGGGCCGAAGCACATCCACCAAAGCTGGTTCAGTACGACCAATGGGGCCGT
CGCGTAGACGAACTACACACGAGTGAGGGATGGCGTAATCTTAAGGCCATTGCTCAACAAGAAGGTATTCCTGCC
ATCTTCTACGAGCGTAAATACCGAGAACATAGTCGGATCTACGGTTTTGCGAAAGCTGCTTTGATGGCTGGGGAC
ACGCATCTGGTCTTTTGCCCACTTAGCATGACAGATGGGGCTGCTCGCACCATCGAGTTGATTGGAAATCAGGAA
GCAAAGAATGACATCCTCCCTCGACTCATCAGTCGGGACCCCTCGGTAGCCTTCACGGCGGGCCAGTGGATGACA
GAGCGACCGGGAGGCTCAGACGTTTCCTTGACGGAGACCACCGCAGTTTCAACTGGGCAGTCAGCACGCTATGGT
CCCGAGTACTCATTGAACGGTCTCAAGTGGTTTTCCAGTGCCACAGACGGTGACATATCTGTAGCGTTGGCCCGT
ACTGGCACCGTCGAAGCTGGTTCTCGAGGCCTCTCACTCTTCTTGATTCCAGTACGACTTCCACTCTTCCCGTCC
CCGTCTGAACCAAAACCAACGTCTACGAGCAACAACATTTTCTTGCACAGGCTCAAGAACAAGATTGGTACTCAT
GCGTTACCGACTGCTGAACTCACACTTGAAGGTGCCGAAGGCTATTTACTTGGCAACCTAAATCAAGGTGTCAAG
AATATAACACCGGTTCTCAATATTACCCGCATTTGGTCGTCCTTTCACAGCGTTGGAAACTTGCGTAAATGTCTT
GGAATTGCAACTTCGTACGCCACGGTTCGGCGTATTCAAAGTGGAAAGGTGCTTTTAAAGGATGCGCCTATCCAT
GTGGCTCAGCTTGCTGAAGTGAATCTGTTATATCGTGCATTATGCCACTTTGCTTTCGGTGCTGTTGAGCTGTTG
GGCAAGGCCGAATGTGGCTCCGGTAATAAGGAAGAGCAAGAGGATGTTCAGAGGCGGTTGAGAATATTAACGCCT
GTGTTGAAGGGATATACAACTGAGAAAGCTTGTTCTGGTATGGAGGAAGCTATGGTGGCCCTGGGAGGTGCTGGT
TATATGGAAGAAAATGGCTTTGGCTTGTGCATCCGTGATGCTTTGGTCGAAAAGATCTGGGAGGGAACAACAACC
GTTCTCGCGCTGGATCTGGTGAGGTCAGTAGCGGATGGTAAGAACTTGCTAGCTTTTATATCATGGGCGTGCTCT
ATCGTAGCTTCTACACCTGGTGTTCTCACTCCCGGGTTCGAGGCCTCATTCAAGCTGCTTGATCTTGCCATCAAC
GAACTGTCCACTGCATACGATGCTCCCATTTCTCCCTTGGTTCCCCGCCCGGCACTCCTCTTGGTTGGTTCCATC
GCGTCAAGTATCTATCTTCTTGAACATGCAATATGGTCTCATACCCACAAAGAACTTGAGGCAGATGTGGACATT
GAGGTTTTCAATAGGTGGATTGTACAGAGCGGTTTAGAGGGTTACACTGAAGCGGTGAAGAAGGCGAAGGACGCT
GGGAAAGCAGGAGCAAGAGTGAAAGCAAATGAAAAGATAGTATTCGGTGCGAAACTGTGA
Transcript >AgabiH97|101460
ATGCGCATTGAAGAAGGCTTTCAACAGATTCCTTTTCCTCAACAAAATGTGTATACCTCGGACACGGTTCTCCCA
GCACTATTGAAGCGCTTGTTGCCCAAGAGTATATTTGAGGAAATCGAACCGGACCTCGTCCGCCTTGGAAACGAC
GTCATCAATCGCATTCGCGACCTGGGGGCCGAAGCACATCCACCAAAGCTGGTTCAGTACGACCAATGGGGCCGT
CGCGTAGACGAACTACACACGAGTGAGGGATGGCGTAATCTTAAGGCCATTGCTCAACAAGAAGGTATTCCTGCC
ATCTTCTACGAGCGTAAATACCGAGAACATAGTCGGATCTACGGTTTTGCGAAAGCTGCTTTGATGGCTGGGGAC
ACGCATCTGGTCTTTTGCCCACTTAGCATGACAGATGGGGCTGCTCGCACCATCGAGTTGATTGGAAATCAGGAA
GCAAAGAATGACATCCTCCCTCGACTCATCAGTCGGGACCCCTCGGTAGCCTTCACGGCGGGCCAGTGGATGACA
GAGCGACCGGGAGGCTCAGACGTTTCCTTGACGGAGACCACCGCAGTTTCAACTGGGCAGTCAGCACGCTATGGT
CCCGAGTACTCATTGAACGGTCTCAAGTGGTTTTCCAGTGCCACAGACGGTGACATATCTGTAGCGTTGGCCCGT
ACTGGCACCGTCGAAGCTGGTTCTCGAGGCCTCTCACTCTTCTTGATTCCAGTACGACTTCCACTCTTCCCGTCC
CCGTCTGAACCAAAACCAACGTCTACGAGCAACAACATTTTCTTGCACAGGCTCAAGAACAAGATTGGTACTCAT
GCGTTACCGACTGCTGAACTCACACTTGAAGGTGCCGAAGGCTATTTACTTGGCAACCTAAATCAAGGTGTCAAG
AATATAACACCGGTTCTCAATATTACCCGCATTTGGTCGTCCTTTCACAGCGTTGGAAACTTGCGTAAATGTCTT
GGAATTGCAACTTCGTACGCCACGGTTCGGCGTATTCAAAGTGGAAAGGTGCTTTTAAAGGATGCGCCTATCCAT
GTGGCTCAGCTTGCTGAAGTGAATCTGTTATATCGTGCATTATGCCACTTTGCTTTCGGTGCTGTTGAGCTGTTG
GGCAAGGCCGAATGTGGCTCCGGTAATAAGGAAGAGCAAGAGGATGTTCAGAGGCGGTTGAGAATATTAACGCCT
GTGTTGAAGGGATATACAACTGAGAAAGCTTGTTCTGGTATGGAGGAAGCTATGGTGGCCCTGGGAGGTGCTGGT
TATATGGAAGAAAATGGCTTTGGCTTGTGCATCCGTGATGCTTTGGTCGAAAAGATCTGGGAGGGAACAACAACC
GTTCTCGCGCTGGATCTGGTGAGGTCAGTAGCGGATGGTAAGAACTTGCTAGCTTTTATATCATGGGCGTGCTCT
ATCGTAGCTTCTACACCTGGTGTTCTCACTCCCGGGTTCGAGGCCTCATTCAAGCTGCTTGATCTTGCCATCAAC
GAACTGTCCACTGCATACGATGCTCCCATTTCTCCCTTGGTTCCCCGCCCGGCACTCCTCTTGGTTGGTTCCATC
GCGTCAAGTATCTATCTTCTTGAACATGCAATATGGTCTCATACCCACAAAGAACTTGAGGCAGATGTGGACATT
GAGGTTTTCAATAGGTGGATTGTACAGAGCGGTTTAGAGGGTTACACTGAAGCGGTGAAGAAGGCGAAGGACGCT
GGGAAAGCAGGAGCAAGAGTGAAAGCAAATGAAAAGATAGTATTCGGTGCGAAACTGTGA
Gene >AgabiH97|101460
ATGCGCATTGAAGAAGGCTTTCAACAGGCAAGTCCTATTGTTTCTCTCCTGCAGTCTTCTAAAGTATTGTCCCTA
GATTCCTTTTCCTCAACAAAATGTGTATACCTCGGACACGGTTCTCCCAGCACTATTGAAGCGCTTGTTGCCCAA
GAGGTGATAGTGATTCGAAATCCACATCCCTCGATACTGAATCCCCGCCGACAGTATATTTGAGGAAATCGAACC
GGACCTCGTCCGCCTTGGAAACGACGTCATCAATCGTCAGTATCATTTCACTGCACAAATCTCTGCAGAACACGA
ATTTATACCAATGTAGGCATTCGCGACCTGGGGGCCGAAGCACATCCACCAAAGCTGGTTCAGTACGACCAATGG
GGCCGTCGCGTAGACGAACTACACACGAGTGAGGGATGGCGTAATCTTAAGGCCATTGCTCAACAAGAAGGTATT
CCTGCCATCTTCTACGAGCGTAAATACCGAGAACATAGTCGGATCTACGGTTTTGCGAAAGCTGCTTTGATGGCT
GGGGACACGCATCTGGTATGTCATGACTACACCCCTCGCTTCCCTTTCTGAGGTCAGTCGGCTGTTCCAGGTCTT
TTGCCCACTTAGCATGACAGATGGGGCTGCTCGCACCATCGAGTTGATTGGAAATCAGGAAGCAAAGAATGACAT
CCTCCCTCGACTCATCAGGTAGCGTAATCCCTCGGCTTAACTGCATTGTTATGGCTGACATCACGCAGTCGGGAC
CCCTCGGTAGCCTTCACGGCGGGCCAGTGGATGACAGAGGTGCGTTTTATCCTTTTATAAGCAATCTGATTGCTC
ATGGTCCCTTCAATAGCGACCGGGAGGCTCAGACGTTTCCTTGACGGAGACCACCGCAGTTTCAACTGGGCAGTC
AGCACGCTATGGTCCCGAGTACTCATTGAACGGTCTCAAGTGGTTTTCCAGTGCCACAGACGGTGACATATCTGT
AGCGTTGGCCCGTACTGGCACCGTCGAAGCTGGTTCTCGAGGCCTCTCACTCTTCTTGATTCCAGTACGACTTCC
ACTCTTCCCGTCCCCGTCTGAACCAAAACCAACGTCTACGAGCAACAACATTTTCTTGCACAGGCTCAAGAACAA
GATTGGTACTCATGCGTTACCGACTGCTGAACTCACACTTGAAGGTGCCGAAGGCTATTTACTTGGCAACCTAAA
TCAAGGTGTCAAGAATATAACACCGGTTCTCAATATTACCCGCATTTGGTCGTCCTTTCACAGCGTTGGAAACTT
GCGTAAATGTCTTGGAATTGCAACTTCGTACGCCACGGTTCGGCGTATTCAAAGTGGAAAGGTGCTTTTAAAGGA
TGCGCCTATCCATGTGGCTCAGCTTGCTGAAGTGAATCTGTTATATCGTGCATTATGCCACTTTGCTTTCGGTGC
TGTTGAGCTGTTGGGCAAGGCCGAATGTGGCTCCGGTAATAAGGAAGAGCAAGAGGATGTTCAGAGGCGGTTGAG
AATATTAACGCCTGTGTTGAAGGGATATACAACTGAGAAAGCTTGTTCTGGTATGGAGGAAGCTATGGTGGCCCT
GGGAGGTGCTGGTTATATGGAAGAAAATGGCTTTGGCTTGTGCATCCGTGATGCTTTGGTCGAAAAGTATGTGTT
CAAGCTATGGCGAAAAGACTACGGAACTGACCACTATACCAAACGGCAGGATCTGGGAGGGAACAACAACCGTTC
TCGCGCTGGATCTGGTGAGGTCAGTAGCGGATGGTAAGAACTTGCTAGCTTTTATATCAGTATGTATCTCTTCAA
TGATATGCTTAATGAAGTTGTTCATATATTTCTGGCAGTGGGCGTGCTCTATCGTAGCTTCTACACCTGGTGTTC
TCACTCCCGGGTTCGAGGCCTCATTCAAGCTGCTTGATCTTGCCATCAACGAACTGTCCACTGCATACGATGCTC
CCATTTCTCCCTTGGTTCCCCGCCCGGCACTCCTCTTGGTTGGTTCCATCGCGTCAAGTATCTATCTTCTTGAAC
ATGCAATATGGTCTCATACCCACAAAGAACTTGAGGCAGATGTGGACATTGAGGTTTTCAATAGGTGGATTGTAC
AGAGCGGTTTAGAGGGTTACACTGAAGCGGTGAAGAAGGCGAAGGACGCTGGGAAAGCAGGAGCAAGAGTGAAAG
CAAATGAAAAGATAGTATTCGGTGCGAAACTGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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