Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|101460
Gene name
Locationscaffold_7:1107155..1109365
Strand-
Gene length (bp)2210
Transcript length (bp)1785
Coding sequence length (bp)1785
Protein length (aa) 595

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF18158 AidB_N Adaptive response protein AidB N-terminal domain 9.8E-18 9 163
PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain 1.8E-16 296 460
PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain 1.7E-10 173 285
PF08028 Acyl-CoA_dh_2 Acyl-CoA dehydrogenase, C-terminal domain 8.8E-06 312 445

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9XWZ2|ACD11_CAEEL Acyl-CoA dehydrogenase family member 11 OS=Caenorhabditis elegans GN=acdh-11 PE=1 SV=1 6 590 2.0E-94
sp|P33224|AIDB_ECOLI Putative acyl-CoA dehydrogenase AidB OS=Escherichia coli (strain K12) GN=aidB PE=1 SV=3 8 458 7.0E-29
sp|Q5LLW7|DMDC_RUEPO 3-methylmercaptopropionyl-CoA dehydrogenase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=dmdC PE=1 SV=1 70 494 4.0E-26
sp|P45857|ACDB_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=mmgC PE=2 SV=3 143 463 8.0E-14
sp|C3UVB0|ACD_DESML Glutaryl-CoA dehydrogenase OS=Desulfococcus multivorans GN=Acd PE=1 SV=1 138 341 4.0E-13
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Swissprot ID Swissprot Description Start End E-value
sp|Q9XWZ2|ACD11_CAEEL Acyl-CoA dehydrogenase family member 11 OS=Caenorhabditis elegans GN=acdh-11 PE=1 SV=1 6 590 2.0E-94
sp|P33224|AIDB_ECOLI Putative acyl-CoA dehydrogenase AidB OS=Escherichia coli (strain K12) GN=aidB PE=1 SV=3 8 458 7.0E-29
sp|Q5LLW7|DMDC_RUEPO 3-methylmercaptopropionyl-CoA dehydrogenase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=dmdC PE=1 SV=1 70 494 4.0E-26
sp|P45857|ACDB_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=mmgC PE=2 SV=3 143 463 8.0E-14
sp|C3UVB0|ACD_DESML Glutaryl-CoA dehydrogenase OS=Desulfococcus multivorans GN=Acd PE=1 SV=1 138 341 4.0E-13
sp|Q8JZN5|ACAD9_MOUSE Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Mus musculus GN=Acad9 PE=1 SV=2 141 454 5.0E-12
sp|Q8HXY7|ACADV_MACFA Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=ACADVL PE=2 SV=1 141 454 8.0E-12
sp|G3KIM8|ACRC_CLOPR Acryloyl-CoA reductase (NADH) OS=Clostridium propionicum GN=acrC PE=1 SV=1 139 460 6.0E-11
sp|P45953|ACADV_RAT Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadvl PE=1 SV=1 133 454 1.0E-10
sp|P49748|ACADV_HUMAN Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADVL PE=1 SV=1 141 454 2.0E-10
sp|Q06319|ACDS_MEGEL Acyl-CoA dehydrogenase, short-chain specific OS=Megasphaera elsdenii PE=1 SV=1 40 451 3.0E-10
sp|Q9FS88|MBCD_SOLTU 2-methylacyl-CoA dehydrogenase, mitochondrial OS=Solanum tuberosum GN=2MBCD PE=1 SV=2 147 460 5.0E-10
sp|O34421|ACDC_BACSU Probable acyl-CoA dehydrogenase YngJ OS=Bacillus subtilis (strain 168) GN=yngJ PE=3 SV=1 146 460 6.0E-10
sp|P48818|ACADV_BOVIN Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADVL PE=2 SV=3 141 454 6.0E-10
sp|P50544|ACADV_MOUSE Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadvl PE=1 SV=3 133 454 8.0E-10
sp|Q0NXR6|ACAD8_BOVIN Isobutyryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACAD8 PE=2 SV=1 143 460 9.0E-10
sp|P45867|ACDA_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=acdA PE=2 SV=1 146 462 1.0E-08
sp|Q9FS87|IVD_SOLTU Isovaleryl-CoA dehydrogenase, mitochondrial OS=Solanum tuberosum GN=IVD PE=1 SV=2 147 460 1.0E-08
sp|Q2LQN9|CH1CO_SYNAS Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase OS=Syntrophus aciditrophicus (strain SB) GN=SYN_02587 PE=1 SV=1 133 460 3.0E-08
sp|Q9UKU7|ACAD8_HUMAN Isobutyryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACAD8 PE=1 SV=1 133 460 3.0E-08
sp|Q5RAS0|ACADS_PONAB Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=ACADS PE=2 SV=1 146 459 5.0E-08
sp|P16219|ACADS_HUMAN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADS PE=1 SV=1 146 459 8.0E-08
sp|Q75IM9|IVD_ORYSJ Isovaleryl-CoA dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os05g0125500 PE=2 SV=2 147 460 8.0E-08
sp|Q9H845|ACAD9_HUMAN Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Homo sapiens GN=ACAD9 PE=1 SV=1 141 454 1.0E-07
sp|Q07417|ACADS_MOUSE Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acads PE=1 SV=2 174 459 1.0E-07
sp|P70584|ACDSB_RAT Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadsb PE=1 SV=1 147 451 2.0E-07
sp|P15651|ACADS_RAT Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acads PE=1 SV=2 174 459 2.0E-07
sp|Q9DBL1|ACDSB_MOUSE Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadsb PE=1 SV=1 148 451 1.0E-06
sp|P34275|IVD_CAEEL Probable acyl-CoA dehydrogenase 6 OS=Caenorhabditis elegans GN=acdh-6 PE=3 SV=2 116 452 5.0E-06
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GO

GO Term Description Terminal node
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 38 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|101460
MRIEEGFQQIPFPQQNVYTSDTVLPALLKRLLPKSIFEEIEPDLVRLGNDVINRIRDLGAEAHPPKLVQYDQWGR
RVDELHTSEGWRNLKAIAQQEGIPAIFYERKYREHSRIYGFAKAALMAGDTHLVFCPLSMTDGAARTIELIGNQE
AKNDILPRLISRDPSVAFTAGQWMTERPGGSDVSLTETTAVSTGQSARYGPEYSLNGLKWFSSATDGDISVALAR
TGTVEAGSRGLSLFLIPVRLPLFPSPSEPKPTSTSNNIFLHRLKNKIGTHALPTAELTLEGAEGYLLGNLNQGVK
NITPVLNITRIWSSFHSVGNLRKCLGIATSYATVRRIQSGKVLLKDAPIHVAQLAEVNLLYRALCHFAFGAVELL
GKAECGSGNKEEQEDVQRRLRILTPVLKGYTTEKACSGMEEAMVALGGAGYMEENGFGLCIRDALVEKIWEGTTT
VLALDLVRSVADGKNLLAFISWACSIVASTPGVLTPGFEASFKLLDLAINELSTAYDAPISPLVPRPALLLVGSI
ASSIYLLEHAIWSHTHKELEADVDIEVFNRWIVQSGLEGYTEAVKKAKDAGKAGARVKANEKIVFGAKL*
Coding >AgabiH97|101460
ATGCGCATTGAAGAAGGCTTTCAACAGATTCCTTTTCCTCAACAAAATGTGTATACCTCGGACACGGTTCTCCCA
GCACTATTGAAGCGCTTGTTGCCCAAGAGTATATTTGAGGAAATCGAACCGGACCTCGTCCGCCTTGGAAACGAC
GTCATCAATCGCATTCGCGACCTGGGGGCCGAAGCACATCCACCAAAGCTGGTTCAGTACGACCAATGGGGCCGT
CGCGTAGACGAACTACACACGAGTGAGGGATGGCGTAATCTTAAGGCCATTGCTCAACAAGAAGGTATTCCTGCC
ATCTTCTACGAGCGTAAATACCGAGAACATAGTCGGATCTACGGTTTTGCGAAAGCTGCTTTGATGGCTGGGGAC
ACGCATCTGGTCTTTTGCCCACTTAGCATGACAGATGGGGCTGCTCGCACCATCGAGTTGATTGGAAATCAGGAA
GCAAAGAATGACATCCTCCCTCGACTCATCAGTCGGGACCCCTCGGTAGCCTTCACGGCGGGCCAGTGGATGACA
GAGCGACCGGGAGGCTCAGACGTTTCCTTGACGGAGACCACCGCAGTTTCAACTGGGCAGTCAGCACGCTATGGT
CCCGAGTACTCATTGAACGGTCTCAAGTGGTTTTCCAGTGCCACAGACGGTGACATATCTGTAGCGTTGGCCCGT
ACTGGCACCGTCGAAGCTGGTTCTCGAGGCCTCTCACTCTTCTTGATTCCAGTACGACTTCCACTCTTCCCGTCC
CCGTCTGAACCAAAACCAACGTCTACGAGCAACAACATTTTCTTGCACAGGCTCAAGAACAAGATTGGTACTCAT
GCGTTACCGACTGCTGAACTCACACTTGAAGGTGCCGAAGGCTATTTACTTGGCAACCTAAATCAAGGTGTCAAG
AATATAACACCGGTTCTCAATATTACCCGCATTTGGTCGTCCTTTCACAGCGTTGGAAACTTGCGTAAATGTCTT
GGAATTGCAACTTCGTACGCCACGGTTCGGCGTATTCAAAGTGGAAAGGTGCTTTTAAAGGATGCGCCTATCCAT
GTGGCTCAGCTTGCTGAAGTGAATCTGTTATATCGTGCATTATGCCACTTTGCTTTCGGTGCTGTTGAGCTGTTG
GGCAAGGCCGAATGTGGCTCCGGTAATAAGGAAGAGCAAGAGGATGTTCAGAGGCGGTTGAGAATATTAACGCCT
GTGTTGAAGGGATATACAACTGAGAAAGCTTGTTCTGGTATGGAGGAAGCTATGGTGGCCCTGGGAGGTGCTGGT
TATATGGAAGAAAATGGCTTTGGCTTGTGCATCCGTGATGCTTTGGTCGAAAAGATCTGGGAGGGAACAACAACC
GTTCTCGCGCTGGATCTGGTGAGGTCAGTAGCGGATGGTAAGAACTTGCTAGCTTTTATATCATGGGCGTGCTCT
ATCGTAGCTTCTACACCTGGTGTTCTCACTCCCGGGTTCGAGGCCTCATTCAAGCTGCTTGATCTTGCCATCAAC
GAACTGTCCACTGCATACGATGCTCCCATTTCTCCCTTGGTTCCCCGCCCGGCACTCCTCTTGGTTGGTTCCATC
GCGTCAAGTATCTATCTTCTTGAACATGCAATATGGTCTCATACCCACAAAGAACTTGAGGCAGATGTGGACATT
GAGGTTTTCAATAGGTGGATTGTACAGAGCGGTTTAGAGGGTTACACTGAAGCGGTGAAGAAGGCGAAGGACGCT
GGGAAAGCAGGAGCAAGAGTGAAAGCAAATGAAAAGATAGTATTCGGTGCGAAACTGTGA
Transcript >AgabiH97|101460
ATGCGCATTGAAGAAGGCTTTCAACAGATTCCTTTTCCTCAACAAAATGTGTATACCTCGGACACGGTTCTCCCA
GCACTATTGAAGCGCTTGTTGCCCAAGAGTATATTTGAGGAAATCGAACCGGACCTCGTCCGCCTTGGAAACGAC
GTCATCAATCGCATTCGCGACCTGGGGGCCGAAGCACATCCACCAAAGCTGGTTCAGTACGACCAATGGGGCCGT
CGCGTAGACGAACTACACACGAGTGAGGGATGGCGTAATCTTAAGGCCATTGCTCAACAAGAAGGTATTCCTGCC
ATCTTCTACGAGCGTAAATACCGAGAACATAGTCGGATCTACGGTTTTGCGAAAGCTGCTTTGATGGCTGGGGAC
ACGCATCTGGTCTTTTGCCCACTTAGCATGACAGATGGGGCTGCTCGCACCATCGAGTTGATTGGAAATCAGGAA
GCAAAGAATGACATCCTCCCTCGACTCATCAGTCGGGACCCCTCGGTAGCCTTCACGGCGGGCCAGTGGATGACA
GAGCGACCGGGAGGCTCAGACGTTTCCTTGACGGAGACCACCGCAGTTTCAACTGGGCAGTCAGCACGCTATGGT
CCCGAGTACTCATTGAACGGTCTCAAGTGGTTTTCCAGTGCCACAGACGGTGACATATCTGTAGCGTTGGCCCGT
ACTGGCACCGTCGAAGCTGGTTCTCGAGGCCTCTCACTCTTCTTGATTCCAGTACGACTTCCACTCTTCCCGTCC
CCGTCTGAACCAAAACCAACGTCTACGAGCAACAACATTTTCTTGCACAGGCTCAAGAACAAGATTGGTACTCAT
GCGTTACCGACTGCTGAACTCACACTTGAAGGTGCCGAAGGCTATTTACTTGGCAACCTAAATCAAGGTGTCAAG
AATATAACACCGGTTCTCAATATTACCCGCATTTGGTCGTCCTTTCACAGCGTTGGAAACTTGCGTAAATGTCTT
GGAATTGCAACTTCGTACGCCACGGTTCGGCGTATTCAAAGTGGAAAGGTGCTTTTAAAGGATGCGCCTATCCAT
GTGGCTCAGCTTGCTGAAGTGAATCTGTTATATCGTGCATTATGCCACTTTGCTTTCGGTGCTGTTGAGCTGTTG
GGCAAGGCCGAATGTGGCTCCGGTAATAAGGAAGAGCAAGAGGATGTTCAGAGGCGGTTGAGAATATTAACGCCT
GTGTTGAAGGGATATACAACTGAGAAAGCTTGTTCTGGTATGGAGGAAGCTATGGTGGCCCTGGGAGGTGCTGGT
TATATGGAAGAAAATGGCTTTGGCTTGTGCATCCGTGATGCTTTGGTCGAAAAGATCTGGGAGGGAACAACAACC
GTTCTCGCGCTGGATCTGGTGAGGTCAGTAGCGGATGGTAAGAACTTGCTAGCTTTTATATCATGGGCGTGCTCT
ATCGTAGCTTCTACACCTGGTGTTCTCACTCCCGGGTTCGAGGCCTCATTCAAGCTGCTTGATCTTGCCATCAAC
GAACTGTCCACTGCATACGATGCTCCCATTTCTCCCTTGGTTCCCCGCCCGGCACTCCTCTTGGTTGGTTCCATC
GCGTCAAGTATCTATCTTCTTGAACATGCAATATGGTCTCATACCCACAAAGAACTTGAGGCAGATGTGGACATT
GAGGTTTTCAATAGGTGGATTGTACAGAGCGGTTTAGAGGGTTACACTGAAGCGGTGAAGAAGGCGAAGGACGCT
GGGAAAGCAGGAGCAAGAGTGAAAGCAAATGAAAAGATAGTATTCGGTGCGAAACTGTGA
Gene >AgabiH97|101460
ATGCGCATTGAAGAAGGCTTTCAACAGGCAAGTCCTATTGTTTCTCTCCTGCAGTCTTCTAAAGTATTGTCCCTA
GATTCCTTTTCCTCAACAAAATGTGTATACCTCGGACACGGTTCTCCCAGCACTATTGAAGCGCTTGTTGCCCAA
GAGGTGATAGTGATTCGAAATCCACATCCCTCGATACTGAATCCCCGCCGACAGTATATTTGAGGAAATCGAACC
GGACCTCGTCCGCCTTGGAAACGACGTCATCAATCGTCAGTATCATTTCACTGCACAAATCTCTGCAGAACACGA
ATTTATACCAATGTAGGCATTCGCGACCTGGGGGCCGAAGCACATCCACCAAAGCTGGTTCAGTACGACCAATGG
GGCCGTCGCGTAGACGAACTACACACGAGTGAGGGATGGCGTAATCTTAAGGCCATTGCTCAACAAGAAGGTATT
CCTGCCATCTTCTACGAGCGTAAATACCGAGAACATAGTCGGATCTACGGTTTTGCGAAAGCTGCTTTGATGGCT
GGGGACACGCATCTGGTATGTCATGACTACACCCCTCGCTTCCCTTTCTGAGGTCAGTCGGCTGTTCCAGGTCTT
TTGCCCACTTAGCATGACAGATGGGGCTGCTCGCACCATCGAGTTGATTGGAAATCAGGAAGCAAAGAATGACAT
CCTCCCTCGACTCATCAGGTAGCGTAATCCCTCGGCTTAACTGCATTGTTATGGCTGACATCACGCAGTCGGGAC
CCCTCGGTAGCCTTCACGGCGGGCCAGTGGATGACAGAGGTGCGTTTTATCCTTTTATAAGCAATCTGATTGCTC
ATGGTCCCTTCAATAGCGACCGGGAGGCTCAGACGTTTCCTTGACGGAGACCACCGCAGTTTCAACTGGGCAGTC
AGCACGCTATGGTCCCGAGTACTCATTGAACGGTCTCAAGTGGTTTTCCAGTGCCACAGACGGTGACATATCTGT
AGCGTTGGCCCGTACTGGCACCGTCGAAGCTGGTTCTCGAGGCCTCTCACTCTTCTTGATTCCAGTACGACTTCC
ACTCTTCCCGTCCCCGTCTGAACCAAAACCAACGTCTACGAGCAACAACATTTTCTTGCACAGGCTCAAGAACAA
GATTGGTACTCATGCGTTACCGACTGCTGAACTCACACTTGAAGGTGCCGAAGGCTATTTACTTGGCAACCTAAA
TCAAGGTGTCAAGAATATAACACCGGTTCTCAATATTACCCGCATTTGGTCGTCCTTTCACAGCGTTGGAAACTT
GCGTAAATGTCTTGGAATTGCAACTTCGTACGCCACGGTTCGGCGTATTCAAAGTGGAAAGGTGCTTTTAAAGGA
TGCGCCTATCCATGTGGCTCAGCTTGCTGAAGTGAATCTGTTATATCGTGCATTATGCCACTTTGCTTTCGGTGC
TGTTGAGCTGTTGGGCAAGGCCGAATGTGGCTCCGGTAATAAGGAAGAGCAAGAGGATGTTCAGAGGCGGTTGAG
AATATTAACGCCTGTGTTGAAGGGATATACAACTGAGAAAGCTTGTTCTGGTATGGAGGAAGCTATGGTGGCCCT
GGGAGGTGCTGGTTATATGGAAGAAAATGGCTTTGGCTTGTGCATCCGTGATGCTTTGGTCGAAAAGTATGTGTT
CAAGCTATGGCGAAAAGACTACGGAACTGACCACTATACCAAACGGCAGGATCTGGGAGGGAACAACAACCGTTC
TCGCGCTGGATCTGGTGAGGTCAGTAGCGGATGGTAAGAACTTGCTAGCTTTTATATCAGTATGTATCTCTTCAA
TGATATGCTTAATGAAGTTGTTCATATATTTCTGGCAGTGGGCGTGCTCTATCGTAGCTTCTACACCTGGTGTTC
TCACTCCCGGGTTCGAGGCCTCATTCAAGCTGCTTGATCTTGCCATCAACGAACTGTCCACTGCATACGATGCTC
CCATTTCTCCCTTGGTTCCCCGCCCGGCACTCCTCTTGGTTGGTTCCATCGCGTCAAGTATCTATCTTCTTGAAC
ATGCAATATGGTCTCATACCCACAAAGAACTTGAGGCAGATGTGGACATTGAGGTTTTCAATAGGTGGATTGTAC
AGAGCGGTTTAGAGGGTTACACTGAAGCGGTGAAGAAGGCGAAGGACGCTGGGAAAGCAGGAGCAAGAGTGAAAG
CAAATGAAAAGATAGTATTCGGTGCGAAACTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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