Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|099500
Gene name
Locationscaffold_7:653442..654988
Strand+
Gene length (bp)1546
Transcript length (bp)1389
Coding sequence length (bp)1389
Protein length (aa) 463

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 1.0E-06 12 53
PF00646 F-box F-box domain 5.6E-05 13 45

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6846 0.4417 0.08 0.0531 0.1325 0.0103 0.1597 0.1753 0.2369 0.0022

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup1593
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|016750
Agaricus bisporus var bisporus H39 AgabiH39|049060
Agaricus bisporus var bisporus H39 AgabiH39|099480
Agaricus bisporus var bisporus H39 AgabiH39|099490
Agaricus bisporus var bisporus H39 AgabiH39|099500
Agaricus bisporus var bisporus H39 AgabiH39|400700
Agaricus bisporus var bisporus H39 AgabiH39|400800
Agaricus bisporus var bisporus H97 AgabiH97|016680
Agaricus bisporus var bisporus H97 AgabiH97|016750
Agaricus bisporus var bisporus H97 AgabiH97|049060
Agaricus bisporus var bisporus H97 AgabiH97|099480
Agaricus bisporus var bisporus H97 AgabiH97|099490
Agaricus bisporus var bisporus H97 AgabiH97|099500 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|099810
Agaricus bisporus var bisporus H97 AgabiH97|099830

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|099500
MEDADQDVQGLTSLPTEVLSQILMYVDGSDIPALQQTCQTLRSVTMARQFWYNRIHRLCQEHVSPPEEELEDYSI
AELEHWTMRRIRARNTCPAKIQIRTRDVYGGDTLLVPGGRWLLSPYDDRIYFVDLDSNNLRMRQLFVPKICVPFT
WFRKKIGHRIWLDHKAPRLSFRFLSCIADTDIDIQFTWVTIHLVNLIGHGANATLTGQIIATFRCPKARKPRYLI
AFNDRYFVQGRGYQSLITDGGLEIFDYRQALGCSRYPKLMDSHTLPFSEDCSTHLEFINEDVLAIYCDVTDTYHI
FNIESPTSFKLLHEIKLPVLPFDFSRTYWTPEASLMTFTSSPISSTIKRIYGLVIPHDSKLHPWTVELGTFAGSR
IDARITFEPGIFVSLFYNSKTSTISRLVHKWDYTCESSCGGPTLISYLEQDVDVGHLEKLAAFDEDTGRSVYFSK
GGPRIFEIAVAG*
Coding >AgabiH97|099500
ATGGAAGATGCTGATCAGGATGTTCAAGGACTCACGTCACTTCCCACCGAGGTGCTCTCTCAGATCCTCATGTAT
GTAGACGGTTCAGACATACCCGCGCTTCAGCAAACGTGCCAAACTTTGCGTTCCGTTACAATGGCGCGGCAGTTT
TGGTATAACCGCATTCATCGACTCTGCCAAGAACATGTCTCCCCACCTGAAGAAGAATTAGAAGATTATTCTATA
GCTGAACTCGAGCACTGGACCATGCGACGAATTCGTGCCAGGAATACTTGCCCTGCGAAAATACAAATTCGCACT
CGAGATGTATACGGCGGGGATACACTCCTCGTTCCAGGTGGTCGGTGGCTTCTGAGTCCTTATGATGATCGGATA
TACTTCGTCGACTTGGACAGCAACAATCTACGAATGCGCCAATTATTCGTTCCGAAAATCTGTGTCCCGTTCACC
TGGTTCCGCAAAAAAATCGGACATCGTATATGGTTAGACCATAAAGCACCGCGATTGTCTTTCCGCTTTTTAAGT
TGCATTGCTGACACCGATATTGATATACAGTTTACGTGGGTAACTATTCATCTGGTCAATCTGATTGGCCATGGT
GCCAATGCAACTCTCACTGGTCAGATCATTGCTACCTTTCGATGCCCCAAGGCGAGAAAACCACGTTATTTAATT
GCCTTCAATGATCGCTATTTTGTCCAAGGTCGAGGCTACCAGTCTTTGATTACAGATGGGGGATTGGAAATTTTC
GACTATAGACAAGCCTTAGGATGCTCTCGTTACCCTAAGTTGATGGACAGCCATACCCTTCCCTTCAGTGAAGAT
TGTTCTACCCATTTGGAGTTCATCAACGAGGACGTTCTTGCTATCTACTGCGACGTAACAGATACCTATCATATC
TTCAACATAGAGTCACCAACGTCGTTCAAGCTTTTGCATGAAATCAAACTGCCTGTGTTACCATTTGACTTTTCC
AGGACCTATTGGACACCTGAAGCGTCGCTGATGACGTTCACCTCGTCCCCAATTTCGTCTACCATCAAAAGAATT
TATGGGCTCGTTATACCTCATGACAGCAAGCTTCATCCATGGACGGTCGAGCTAGGAACATTCGCAGGAAGCAGG
ATTGATGCGCGCATCACCTTCGAGCCTGGTATATTCGTCTCACTGTTCTATAATTCCAAGACAAGCACAATTTCG
CGTCTTGTTCATAAATGGGACTACACATGTGAATCATCCTGTGGTGGACCGACTCTTATATCGTATCTGGAGCAG
GATGTGGATGTGGGTCACCTGGAGAAACTCGCCGCGTTTGATGAAGATACAGGGCGCTCAGTTTATTTTAGCAAA
GGAGGTCCAAGAATATTCGAGATAGCTGTAGCGGGTTGA
Transcript >AgabiH97|099500
ATGGAAGATGCTGATCAGGATGTTCAAGGACTCACGTCACTTCCCACCGAGGTGCTCTCTCAGATCCTCATGTAT
GTAGACGGTTCAGACATACCCGCGCTTCAGCAAACGTGCCAAACTTTGCGTTCCGTTACAATGGCGCGGCAGTTT
TGGTATAACCGCATTCATCGACTCTGCCAAGAACATGTCTCCCCACCTGAAGAAGAATTAGAAGATTATTCTATA
GCTGAACTCGAGCACTGGACCATGCGACGAATTCGTGCCAGGAATACTTGCCCTGCGAAAATACAAATTCGCACT
CGAGATGTATACGGCGGGGATACACTCCTCGTTCCAGGTGGTCGGTGGCTTCTGAGTCCTTATGATGATCGGATA
TACTTCGTCGACTTGGACAGCAACAATCTACGAATGCGCCAATTATTCGTTCCGAAAATCTGTGTCCCGTTCACC
TGGTTCCGCAAAAAAATCGGACATCGTATATGGTTAGACCATAAAGCACCGCGATTGTCTTTCCGCTTTTTAAGT
TGCATTGCTGACACCGATATTGATATACAGTTTACGTGGGTAACTATTCATCTGGTCAATCTGATTGGCCATGGT
GCCAATGCAACTCTCACTGGTCAGATCATTGCTACCTTTCGATGCCCCAAGGCGAGAAAACCACGTTATTTAATT
GCCTTCAATGATCGCTATTTTGTCCAAGGTCGAGGCTACCAGTCTTTGATTACAGATGGGGGATTGGAAATTTTC
GACTATAGACAAGCCTTAGGATGCTCTCGTTACCCTAAGTTGATGGACAGCCATACCCTTCCCTTCAGTGAAGAT
TGTTCTACCCATTTGGAGTTCATCAACGAGGACGTTCTTGCTATCTACTGCGACGTAACAGATACCTATCATATC
TTCAACATAGAGTCACCAACGTCGTTCAAGCTTTTGCATGAAATCAAACTGCCTGTGTTACCATTTGACTTTTCC
AGGACCTATTGGACACCTGAAGCGTCGCTGATGACGTTCACCTCGTCCCCAATTTCGTCTACCATCAAAAGAATT
TATGGGCTCGTTATACCTCATGACAGCAAGCTTCATCCATGGACGGTCGAGCTAGGAACATTCGCAGGAAGCAGG
ATTGATGCGCGCATCACCTTCGAGCCTGGTATATTCGTCTCACTGTTCTATAATTCCAAGACAAGCACAATTTCG
CGTCTTGTTCATAAATGGGACTACACATGTGAATCATCCTGTGGTGGACCGACTCTTATATCGTATCTGGAGCAG
GATGTGGATGTGGGTCACCTGGAGAAACTCGCCGCGTTTGATGAAGATACAGGGCGCTCAGTTTATTTTAGCAAA
GGAGGTCCAAGAATATTCGAGATAGCTGTAGCGGGTTGA
Gene >AgabiH97|099500
ATGGAAGATGCTGATCAGGATGTTCAAGGACTCACGTCACTTCCCACCGAGGTGCTCTCTCAGATCCTCATGTAT
GTAGACGGTTCAGACATACCCGCGCTTCAGCAAGTGTGTTTTGTCGCCATTTTTTTCGCATACGAGCGATGTCTG
ATATTCAGAAGACGTGCCAAACTTTGCGTTCCGTTACAATGGCGCGGCAGTTTTGGTATAACCGCATTCATCGAC
TCTGCCAAGAACATGTCTCCCCACCTGAAGAAGAATTAGAAGATTATTCTATAGCTGAACTCGAGCACTGGACCA
TGCGACGAATTCGTGCCAGGAATACTTGCCCTGCGAAAATACAAATTCGCACTCGAGATGTATACGGCGGGGATA
CACTCCTCGTTCCAGGTGGTCGGTGGCTTCTGAGTCCTTATGATGATCGGATATACTTCGTCGACTTGGACAGCA
ACAATCTACGAATGCGCCAATTATTCGTTCCGAAAATCTGTGTCCCGTTCACCTGGTTCCGCAAAAAAATCGGAC
ATCGTATATGGTTAGACCATAAAGCACCGCGATTGTCTTTCCGCTTTTTAAGTTGCATTGCTGACACCGGTGCGT
TAGTTGAGTGTCATATTCAATGGGACTTACTGGTGCACAGATATTGATATACAGTTTACGTGGGTAACTATTCAT
CTGGTCAATCTGATTGGCCATGGTGCCAATGCAACTCTCACTGGTCAGATCATTGCTACCTTTCGATGCCCCAAG
GCGAGAAAACCACGTTATTTAATTGCCTTCAATGATCGCTATTTTGTCCAAGGTCGAGGCTACCAGTCTTTGATT
ACAGATGGGGGATTGGAAATTTTCGACTATAGACAAGCCTTAGGATGCTCTCGTTACCCTAAGTTGATGGACAGC
CATACCCTTCCCTTCAGTGAAGATTGTTCTACCGTCTGTGCATTCTCTGATCATGGCTCGTACTTGGACTCATAT
CAATTCTTACGAACAGCATTTGGAGTTCATCAACGAGGACGTTCTTGCTATCTACTGCGACGTAACAGATACCTA
TCATATCTTCAACATAGAGTCACCAACGTCGTTCAAGCTTTTGCATGAAATCAAACTGCCTGTGTTACCATTTGA
CTTTTCCAGGACCTATTGGACACCTGAAGCGTCGCTGATGACGTTCACCTCGTCCCCAATTTCGTCTACCATCAA
AAGAATTTATGGGCTCGTTATACCTCATGACAGCAAGCTTCATCCATGGACGGTCGAGCTAGGAACATTCGCAGG
AAGCAGGATTGATGCGCGCATCACCTTCGAGCCTGGTATATTCGTCTCACTGTTCTATAATTCCAAGACAAGCAC
AATTTCGCGTCTTGTTCATAAATGGGACTACACATGTGAATCATCCTGTGGTGGACCGACTCTTATATCGTATCT
GGAGCAGGATGTGGATGTGGGTCACCTGGAGAAACTCGCCGCGTTTGATGAAGATACAGGGCGCTCAGTTTATTT
TAGCAAAGGAGGTCCAAGAATATTCGAGATAGCTGTAGCGGGTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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