Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|099480
Gene name
Locationscaffold_7:649369..650936
Strand+
Gene length (bp)1567
Transcript length (bp)1410
Coding sequence length (bp)1410
Protein length (aa) 470

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 5.7E-06 14 54
PF00646 F-box F-box domain 7.2E-05 14 47

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6998 0.5042 0.072 0.0487 0.1597 0.0088 0.1326 0.1575 0.224 0.0029

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup1593
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|016750
Agaricus bisporus var bisporus H39 AgabiH39|049060
Agaricus bisporus var bisporus H39 AgabiH39|099480
Agaricus bisporus var bisporus H39 AgabiH39|099490
Agaricus bisporus var bisporus H39 AgabiH39|099500
Agaricus bisporus var bisporus H39 AgabiH39|400700
Agaricus bisporus var bisporus H39 AgabiH39|400800
Agaricus bisporus var bisporus H97 AgabiH97|016680
Agaricus bisporus var bisporus H97 AgabiH97|016750
Agaricus bisporus var bisporus H97 AgabiH97|049060
Agaricus bisporus var bisporus H97 AgabiH97|099480 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|099490
Agaricus bisporus var bisporus H97 AgabiH97|099500
Agaricus bisporus var bisporus H97 AgabiH97|099810
Agaricus bisporus var bisporus H97 AgabiH97|099830

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|099480
MSGYTDHWDVQGLTSLPIEILSRIFMYVDGSDIPALQQTCQTLRSVTMARQFWYDRIHRLCKEQVVYPPEEELEE
YSIAELEQWTMRRIRARSTSPVKIQLRSQDLPMPLFFGKTFLSPGGRWLIKPHYDLRVYFVDLDSSNLELHLLLD
PKKDDPRISSNHQGLGFGTRIWIDHKAPRLSFRFQGCIADTEGDPPFTWVYIYQVDLIGHGANATLVAQIIATFR
CPKARKPRFLNALNDRYYVQGRGYQSFTDAGLEIFDYRRALGCFDYPKLMDSYTLPLSEDCSTHLEFISGNILAI
YCNPTTSYHIFNIESPTSFNLLHEIKLPEGIDGLSRTYWTPEASLITFCSPIHLAMLERIYGLVIPHDSKLCPWT
IQLDGFSGSRNGHMTFGPGIFISLLCNYKTDTISRFDHEWDYTCQSPGNGPTRTSYLEQDVDQLGKLVAFDEDTG
RSVHFNNGKLKVLDMVIRG*
Coding >AgabiH97|099480
ATGTCAGGATATACTGATCACTGGGATGTCCAAGGACTCACGTCACTGCCCATCGAGATCCTCTCTCGGATCTTC
ATGTATGTGGACGGCTCAGACATACCCGCTCTTCAGCAAACGTGCCAAACTTTGCGTTCCGTTACAATGGCACGG
CAGTTTTGGTATGATCGTATTCATCGACTCTGCAAAGAACAAGTCGTCTATCCACCTGAAGAAGAATTAGAAGAG
TATTCTATAGCTGAACTCGAGCAATGGACCATGCGACGAATTCGTGCTAGGAGTACTTCCCCCGTGAAAATACAA
CTTCGCAGTCAAGATTTACCCATGCCTCTTTTTTTCGGGAAGACGTTTCTCTCTCCAGGTGGTCGATGGCTTATA
AAACCTCATTACGATCTGCGCGTATACTTCGTCGACTTGGACAGCAGCAATCTAGAACTCCACCTGCTGTTAGAT
CCCAAAAAGGACGACCCACGCATCAGCAGCAATCATCAAGGATTAGGTTTTGGAACGCGTATATGGATAGACCAT
AAAGCACCGCGATTGTCTTTCCGCTTTCAAGGCTGCATCGCTGATACTGAGGGCGATCCTCCGTTTACCTGGGTG
TATATCTATCAGGTCGATCTGATTGGCCATGGTGCCAACGCAACTCTCGTGGCTCAGATCATTGCTACCTTTCGA
TGCCCCAAGGCGAGAAAACCACGTTTTTTAAATGCCCTCAATGATCGCTATTATGTCCAAGGTCGAGGATACCAG
TCTTTCACAGATGCGGGGTTGGAAATTTTCGATTATAGGCGAGCCTTGGGATGCTTTGATTACCCGAAGTTGATG
GACAGTTATACCCTTCCTCTCAGTGAAGATTGTTCTACCCACTTGGAGTTCATCAGCGGCAACATTCTCGCTATC
TACTGCAACCCCACAACCTCCTATCACATCTTCAACATAGAATCACCAACCTCGTTCAATCTTTTGCATGAAATC
AAACTGCCTGAGGGTATAGATGGCCTTTCCAGGACCTATTGGACACCTGAAGCGTCACTGATCACTTTCTGCTCG
CCCATACATCTCGCCATGCTCGAAAGAATTTATGGACTCGTCATACCTCACGACAGCAAGCTTTGTCCGTGGACA
ATCCAGCTGGATGGTTTTTCAGGAAGCCGGAACGGGCACATGACCTTCGGGCCTGGTATTTTCATCTCACTGCTG
TGTAATTATAAGACAGATACGATTTCGCGCTTTGATCATGAATGGGACTACACATGTCAATCGCCAGGTAATGGA
CCAACCCGTACATCATATCTCGAGCAGGATGTGGATCAGCTGGGGAAACTCGTCGCGTTTGATGAAGATACGGGG
CGCTCTGTTCATTTTAACAATGGAAAACTGAAAGTACTCGATATGGTTATAAGGGGTTGA
Transcript >AgabiH97|099480
ATGTCAGGATATACTGATCACTGGGATGTCCAAGGACTCACGTCACTGCCCATCGAGATCCTCTCTCGGATCTTC
ATGTATGTGGACGGCTCAGACATACCCGCTCTTCAGCAAACGTGCCAAACTTTGCGTTCCGTTACAATGGCACGG
CAGTTTTGGTATGATCGTATTCATCGACTCTGCAAAGAACAAGTCGTCTATCCACCTGAAGAAGAATTAGAAGAG
TATTCTATAGCTGAACTCGAGCAATGGACCATGCGACGAATTCGTGCTAGGAGTACTTCCCCCGTGAAAATACAA
CTTCGCAGTCAAGATTTACCCATGCCTCTTTTTTTCGGGAAGACGTTTCTCTCTCCAGGTGGTCGATGGCTTATA
AAACCTCATTACGATCTGCGCGTATACTTCGTCGACTTGGACAGCAGCAATCTAGAACTCCACCTGCTGTTAGAT
CCCAAAAAGGACGACCCACGCATCAGCAGCAATCATCAAGGATTAGGTTTTGGAACGCGTATATGGATAGACCAT
AAAGCACCGCGATTGTCTTTCCGCTTTCAAGGCTGCATCGCTGATACTGAGGGCGATCCTCCGTTTACCTGGGTG
TATATCTATCAGGTCGATCTGATTGGCCATGGTGCCAACGCAACTCTCGTGGCTCAGATCATTGCTACCTTTCGA
TGCCCCAAGGCGAGAAAACCACGTTTTTTAAATGCCCTCAATGATCGCTATTATGTCCAAGGTCGAGGATACCAG
TCTTTCACAGATGCGGGGTTGGAAATTTTCGATTATAGGCGAGCCTTGGGATGCTTTGATTACCCGAAGTTGATG
GACAGTTATACCCTTCCTCTCAGTGAAGATTGTTCTACCCACTTGGAGTTCATCAGCGGCAACATTCTCGCTATC
TACTGCAACCCCACAACCTCCTATCACATCTTCAACATAGAATCACCAACCTCGTTCAATCTTTTGCATGAAATC
AAACTGCCTGAGGGTATAGATGGCCTTTCCAGGACCTATTGGACACCTGAAGCGTCACTGATCACTTTCTGCTCG
CCCATACATCTCGCCATGCTCGAAAGAATTTATGGACTCGTCATACCTCACGACAGCAAGCTTTGTCCGTGGACA
ATCCAGCTGGATGGTTTTTCAGGAAGCCGGAACGGGCACATGACCTTCGGGCCTGGTATTTTCATCTCACTGCTG
TGTAATTATAAGACAGATACGATTTCGCGCTTTGATCATGAATGGGACTACACATGTCAATCGCCAGGTAATGGA
CCAACCCGTACATCATATCTCGAGCAGGATGTGGATCAGCTGGGGAAACTCGTCGCGTTTGATGAAGATACGGGG
CGCTCTGTTCATTTTAACAATGGAAAACTGAAAGTACTCGATATGGTTATAAGGGGTTGA
Gene >AgabiH97|099480
ATGTCAGGATATACTGATCACTGGGATGTCCAAGGACTCACGTCACTGCCCATCGAGATCCTCTCTCGGATCTTC
ATGTATGTGGACGGCTCAGACATACCCGCTCTTCAGCAAGTGTGTTTTTTCGCCATTTTTCTCGCATACGAAGAT
GTCTGATATTTAGAAGACGTGCCAAACTTTGCGTTCCGTTACAATGGCACGGCAGTTTTGGTATGATCGTATTCA
TCGACTCTGCAAAGAACAAGTCGTCTATCCACCTGAAGAAGAATTAGAAGAGTATTCTATAGCTGAACTCGAGCA
ATGGACCATGCGACGAATTCGTGCTAGGAGTACTTCCCCCGTGAAAATACAACTTCGCAGTCAAGATTTACCCAT
GCCTCTTTTTTTCGGGAAGACGTTTCTCTCTCCAGGTGGTCGATGGCTTATAAAACCTCATTACGATCTGCGCGT
ATACTTCGTCGACTTGGACAGCAGCAATCTAGAACTCCACCTGCTGTTAGATCCCAAAAAGGACGACCCACGCAT
CAGCAGCAATCATCAAGGATTAGGTTTTGGAACGCGTATATGGATAGACCATAAAGCACCGCGATTGTCTTTCCG
CTTTCAAGGCTGCATCGCTGATACTGGTATGTTGGTTGAGCGTCATATCCAACGGGACTTACTGGTACTCAGAGG
GCGATCCTCCGTTTACCTGGGTGTATATCTATCAGGTCGATCTGATTGGCCATGGTGCCAACGCAACTCTCGTGG
CTCAGATCATTGCTACCTTTCGATGCCCCAAGGCGAGAAAACCACGTTTTTTAAATGCCCTCAATGATCGCTATT
ATGTCCAAGGTCGAGGATACCAGTCTTTCACAGATGCGGGGTTGGAAATTTTCGATTATAGGCGAGCCTTGGGAT
GCTTTGATTACCCGAAGTTGATGGACAGTTATACCCTTCCTCTCAGTGAAGATTGTTCTACCGTCTGTGTTTTCT
ATGGTTATGGCTCATACTTTCACTCACATTGAAGTCTTATGCACAGCACTTGGAGTTCATCAGCGGCAACATTCT
CGCTATCTACTGCAACCCCACAACCTCCTATCACATCTTCAACATAGAATCACCAACCTCGTTCAATCTTTTGCA
TGAAATCAAACTGCCTGAGGGTATAGATGGCCTTTCCAGGACCTATTGGACACCTGAAGCGTCACTGATCACTTT
CTGCTCGCCCATACATCTCGCCATGCTCGAAAGAATTTATGGACTCGTCATACCTCACGACAGCAAGCTTTGTCC
GTGGACAATCCAGCTGGATGGTTTTTCAGGAAGCCGGAACGGGCACATGACCTTCGGGCCTGGTATTTTCATCTC
ACTGCTGTGTAATTATAAGACAGATACGATTTCGCGCTTTGATCATGAATGGGACTACACATGTCAATCGCCAGG
TAATGGACCAACCCGTACATCATATCTCGAGCAGGATGTGGATCAGCTGGGGAAACTCGTCGCGTTTGATGAAGA
TACGGGGCGCTCTGTTCATTTTAACAATGGAAAACTGAAAGTACTCGATATGGTTATAAGGGGTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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