© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | AgabiH97|098120 |
| Gene name | |
| Location | scaffold_7:259744..260653 |
| Strand | + |
| Gene length (bp) | 909 |
| Transcript length (bp) | 582 |
| Coding sequence length (bp) | 582 |
| Protein length (aa) | 194 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03939 | Ribosomal_L23eN | Ribosomal protein L23, N-terminal domain | 1.7E-23 | 56 | 104 |
| PF00276 | Ribosomal_L23 | Ribosomal protein L23 | 2.6E-16 | 113 | 173 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P51997|RL25_PUCGR | 60S ribosomal protein L25 OS=Puccinia graminis PE=2 SV=2 | 36 | 193 | 2.0E-64 |
| sp|O74391|RL25B_SCHPO | 60S ribosomal protein L25-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl2502 PE=3 SV=1 | 57 | 193 | 3.0E-58 |
| sp|Q10330|RL25A_SCHPO | 60S ribosomal protein L25-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl2501 PE=1 SV=1 | 57 | 193 | 2.0E-57 |
| sp|P62752|RL23A_RAT | 60S ribosomal protein L23a OS=Rattus norvegicus GN=Rpl23a PE=2 SV=1 | 68 | 193 | 3.0E-55 |
| sp|P62751|RL23A_MOUSE | 60S ribosomal protein L23a OS=Mus musculus GN=Rpl23a PE=1 SV=1 | 68 | 193 | 3.0E-55 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P51997|RL25_PUCGR | 60S ribosomal protein L25 OS=Puccinia graminis PE=2 SV=2 | 36 | 193 | 2.0E-64 |
| sp|O74391|RL25B_SCHPO | 60S ribosomal protein L25-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl2502 PE=3 SV=1 | 57 | 193 | 3.0E-58 |
| sp|Q10330|RL25A_SCHPO | 60S ribosomal protein L25-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl2501 PE=1 SV=1 | 57 | 193 | 2.0E-57 |
| sp|P62752|RL23A_RAT | 60S ribosomal protein L23a OS=Rattus norvegicus GN=Rpl23a PE=2 SV=1 | 68 | 193 | 3.0E-55 |
| sp|P62751|RL23A_MOUSE | 60S ribosomal protein L23a OS=Mus musculus GN=Rpl23a PE=1 SV=1 | 68 | 193 | 3.0E-55 |
| sp|P62750|RL23A_HUMAN | 60S ribosomal protein L23a OS=Homo sapiens GN=RPL23A PE=1 SV=1 | 68 | 193 | 3.0E-55 |
| sp|Q24JY1|RL23A_BOVIN | 60S ribosomal protein L23a OS=Bos taurus GN=RPL23A PE=2 SV=1 | 68 | 193 | 3.0E-55 |
| sp|P08792|RL25_CYBJA | 60S ribosomal protein L25 OS=Cyberlindnera jadinii GN=RPL25 PE=3 SV=1 | 57 | 193 | 3.0E-54 |
| sp|P48045|RL25_KLULA | 60S ribosomal protein L25 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=RPL25 PE=3 SV=1 | 57 | 193 | 1.0E-51 |
| sp|P48162|R23A1_CAEEL | 60S ribosomal protein L23a 1 OS=Caenorhabditis elegans GN=rpl-25.1 PE=3 SV=1 | 48 | 193 | 4.0E-49 |
| sp|P04456|RL25_YEAST | 60S ribosomal protein L25 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL25 PE=1 SV=4 | 68 | 193 | 1.0E-46 |
| sp|Q20647|R23A2_CAEEL | 60S ribosomal protein L23a 2 OS=Caenorhabditis elegans GN=rpl-25.2 PE=3 SV=1 | 51 | 193 | 4.0E-45 |
| sp|Q9AT35|RL23A_DAUCA | 60S ribosomal protein L23a OS=Daucus carota GN=RPL23A PE=2 SV=1 | 55 | 193 | 3.0E-44 |
| sp|Q9M3C3|R23A2_ARATH | 60S ribosomal protein L23a-2 OS=Arabidopsis thaliana GN=RPL23AB PE=2 SV=1 | 74 | 193 | 3.0E-43 |
| sp|O22644|RL23A_FRIAG | 60S ribosomal protein L23A OS=Fritillaria agrestis GN=RPL23A PE=2 SV=1 | 48 | 193 | 3.0E-43 |
| sp|Q54BQ3|RL23A_DICDI | 60S ribosomal protein L23a OS=Dictyostelium discoideum GN=rpl23a PE=1 SV=1 | 68 | 193 | 4.0E-42 |
| sp|Q8LD46|R23A1_ARATH | 60S ribosomal protein L23a-1 OS=Arabidopsis thaliana GN=RPL23AA PE=2 SV=2 | 78 | 193 | 4.0E-40 |
| sp|Q07761|RL23A_TOBAC | 60S ribosomal protein L23a OS=Nicotiana tabacum GN=RPL23A PE=2 SV=1 | 74 | 193 | 3.0E-39 |
| sp|P0DJ57|RL23A_TETTS | 60S ribosomal protein L23A OS=Tetrahymena thermophila (strain SB210) GN=RPL23A PE=1 SV=1 | 56 | 193 | 7.0E-34 |
| sp|P41165|RL23A_TRYBB | 60S ribosomal protein L23a OS=Trypanosoma brucei brucei GN=RPL23A PE=2 SV=1 | 73 | 193 | 8.0E-34 |
| sp|Q9LWB5|RK23_SPIOL | 50S ribosomal protein L23, chloroplastic OS=Spinacia oleracea GN=RPL23 PE=1 SV=1 | 106 | 193 | 2.0E-21 |
| sp|Q5JDH1|RL23_THEKO | 50S ribosomal protein L23P OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=rpl23p PE=3 SV=1 | 108 | 193 | 8.0E-20 |
| sp|Q8U000|RL23_PYRFU | 50S ribosomal protein L23P OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl23p PE=1 SV=2 | 108 | 193 | 8.0E-20 |
| sp|P54016|RL23_METJA | 50S ribosomal protein L23P OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=rpl23p PE=3 SV=1 | 108 | 191 | 2.0E-19 |
| sp|O74095|RL23_PYRHO | 50S ribosomal protein L23P OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=rpl23p PE=3 SV=1 | 108 | 193 | 3.0E-19 |
| sp|A6UV66|RL23_META3 | 50S ribosomal protein L23P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl23p PE=3 SV=1 | 108 | 191 | 6.0E-19 |
| sp|Q9V1T7|RL23_PYRAB | 50S ribosomal protein L23P OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=rpl23p PE=3 SV=1 | 108 | 193 | 1.0E-18 |
| sp|B6YSL5|RL23_THEON | 50S ribosomal protein L23P OS=Thermococcus onnurineus (strain NA1) GN=rpl23p PE=3 SV=1 | 108 | 193 | 1.0E-18 |
| sp|C5A284|RL23_THEGJ | 50S ribosomal protein L23P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl23p PE=3 SV=1 | 108 | 193 | 3.0E-18 |
| sp|P10143|RL23_METVS | 50S ribosomal protein L23P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl23p PE=1 SV=1 | 108 | 191 | 3.0E-17 |
| sp|A4FVY0|RL23_METM5 | 50S ribosomal protein L23P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl23p PE=3 SV=1 | 108 | 191 | 4.0E-17 |
| sp|A9A9B6|RL23_METM6 | 50S ribosomal protein L23P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl23p PE=3 SV=1 | 108 | 191 | 6.0E-17 |
| sp|Q8TY92|RL23_METKA | 50S ribosomal protein L23P OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl23p PE=3 SV=1 | 104 | 193 | 6.0E-17 |
| sp|C6A161|RL23_THESM | 50S ribosomal protein L23P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl23p PE=3 SV=1 | 108 | 193 | 7.0E-17 |
| sp|A6VHD4|RL23_METM7 | 50S ribosomal protein L23P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl23p PE=3 SV=1 | 108 | 191 | 9.0E-17 |
| sp|A3DNA6|RL23_STAMF | 50S ribosomal protein L23P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1) GN=rpl23p PE=3 SV=1 | 108 | 193 | 3.0E-16 |
| sp|Q6LX09|RL23_METMP | 50S ribosomal protein L23P OS=Methanococcus maripaludis (strain S2 / LL) GN=rpl23p PE=3 SV=1 | 108 | 191 | 7.0E-16 |
| sp|Q4JB42|RL23_SULAC | 50S ribosomal protein L23P OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=rpl23p PE=3 SV=1 | 118 | 193 | 1.0E-15 |
| sp|Q06842|RL23_HALSA | 50S ribosomal protein L23P OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=rpl23p PE=1 SV=3 | 117 | 191 | 1.0E-15 |
| sp|Q8ZW50|RL23_PYRAE | 50S ribosomal protein L23P OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=rpl23p PE=3 SV=1 | 120 | 193 | 1.0E-15 |
| sp|Q9YFM0|RL23_AERPE | 50S ribosomal protein L23P OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl23p PE=3 SV=2 | 114 | 191 | 9.0E-15 |
| sp|P12732|RL23_HALMA | 50S ribosomal protein L23P OS=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rpl23p PE=1 SV=2 | 111 | 193 | 8.0E-14 |
| sp|Q975I3|RL23_SULTO | 50S ribosomal protein L23P OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=rpl23p PE=3 SV=1 | 118 | 193 | 4.0E-13 |
| sp|O28356|RL23_ARCFU | 50S ribosomal protein L23P OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=rpl23p PE=3 SV=1 | 118 | 191 | 8.0E-13 |
| sp|A5UL87|RL23_METS3 | 50S ribosomal protein L23P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl23p PE=3 SV=1 | 108 | 191 | 1.0E-12 |
| sp|Q3IMY6|RL23_NATPD | 50S ribosomal protein L23P OS=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) GN=rpl23p PE=3 SV=1 | 113 | 191 | 1.0E-12 |
| sp|O26112|RL23_METTH | 50S ribosomal protein L23P OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=rpl23p PE=3 SV=2 | 108 | 191 | 4.0E-12 |
| sp|A8MB73|RL23_CALMQ | 50S ribosomal protein L23P OS=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) GN=rpl23p PE=3 SV=1 | 120 | 193 | 2.0E-11 |
| sp|Q18GF1|RL23_HALWD | 50S ribosomal protein L23P OS=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) GN=rpl23p PE=3 SV=1 | 114 | 191 | 2.0E-11 |
| sp|Q2NFV8|RL23_METST | 50S ribosomal protein L23P OS=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) GN=rpl23p PE=3 SV=1 | 108 | 191 | 3.0E-11 |
| sp|Q97ZQ4|RL23_SULSO | 50S ribosomal protein L23P OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=rpl23p PE=3 SV=1 | 118 | 193 | 3.0E-10 |
| sp|Q2IXQ8|RL23_RHOP2 | 50S ribosomal protein L23 OS=Rhodopseudomonas palustris (strain HaA2) GN=rplW PE=3 SV=1 | 100 | 174 | 1.0E-09 |
| sp|Q134T1|RL23_RHOPS | 50S ribosomal protein L23 OS=Rhodopseudomonas palustris (strain BisB5) GN=rplW PE=3 SV=1 | 100 | 174 | 4.0E-09 |
| sp|Q6N4T7|RL23_RHOPA | 50S ribosomal protein L23 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) GN=rplW PE=1 SV=1 | 100 | 174 | 6.0E-09 |
| sp|Q211F0|RL23_RHOPB | 50S ribosomal protein L23 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplW PE=3 SV=1 | 106 | 174 | 1.0E-08 |
| sp|Q89J86|RL23_BRADU | 50S ribosomal protein L23 OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=rplW PE=3 SV=1 | 103 | 174 | 1.0E-08 |
| sp|Q46G97|RL23_METBF | 50S ribosomal protein L23P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl23p PE=3 SV=1 | 117 | 193 | 1.0E-08 |
| sp|Q6L1C5|RL23_PICTO | 50S ribosomal protein L23P OS=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rpl23p PE=3 SV=1 | 114 | 191 | 2.0E-08 |
| sp|Q8PV48|RL23_METMA | 50S ribosomal protein L23P OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=rpl23p PE=3 SV=1 | 113 | 193 | 2.0E-08 |
| sp|Q8TRU5|RL23_METAC | 50S ribosomal protein L23P OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rpl23p PE=3 SV=1 | 113 | 193 | 3.0E-08 |
| sp|B1ZLK6|RL23_METPB | 50S ribosomal protein L23 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rplW PE=3 SV=1 | 106 | 174 | 3.0E-08 |
| sp|B1LWS8|RL23_METRJ | 50S ribosomal protein L23 OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=rplW PE=3 SV=1 | 106 | 174 | 5.0E-08 |
| sp|Q1QN28|RL23_NITHX | 50S ribosomal protein L23 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rplW PE=3 SV=1 | 110 | 174 | 6.0E-08 |
| sp|B2V7L1|RL23_SULSY | 50S ribosomal protein L23 OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=rplW PE=3 SV=1 | 111 | 174 | 6.0E-08 |
| sp|Q12ZU9|RL23_METBU | 50S ribosomal protein L23P OS=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) GN=rpl23p PE=3 SV=1 | 117 | 193 | 6.0E-08 |
| sp|Q3SSW4|RL23_NITWN | 50S ribosomal protein L23 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rplW PE=3 SV=1 | 109 | 174 | 8.0E-08 |
| sp|Q74N77|RL23_NANEQ | 50S ribosomal protein L23P OS=Nanoarchaeum equitans (strain Kin4-M) GN=rpl23p PE=3 SV=1 | 118 | 191 | 1.0E-07 |
| sp|Q8EK66|RL23_SHEON | 50S ribosomal protein L23 OS=Shewanella oneidensis (strain MR-1) GN=rplW PE=3 SV=2 | 112 | 182 | 1.0E-07 |
| sp|A0LIJ2|RL23_SYNFM | 50S ribosomal protein L23 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rplW PE=3 SV=1 | 111 | 182 | 1.0E-07 |
| sp|Q2FU93|RL23_METHJ | 50S ribosomal protein L23P OS=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) GN=rpl23p PE=3 SV=1 | 117 | 193 | 2.0E-07 |
| sp|Q0I0A3|RL23_SHESR | 50S ribosomal protein L23 OS=Shewanella sp. (strain MR-7) GN=rplW PE=3 SV=2 | 112 | 182 | 2.0E-07 |
| sp|Q0HNT5|RL23_SHESM | 50S ribosomal protein L23 OS=Shewanella sp. (strain MR-4) GN=rplW PE=3 SV=2 | 112 | 182 | 2.0E-07 |
| sp|Q1AU31|RL23_RUBXD | 50S ribosomal protein L23 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=rplW PE=3 SV=1 | 108 | 176 | 3.0E-07 |
| sp|Q5FTY5|RL23_GLUOX | 50S ribosomal protein L23 OS=Gluconobacter oxydans (strain 621H) GN=rplW PE=3 SV=2 | 111 | 191 | 3.0E-07 |
| sp|A9W4Q3|RL23_METEP | 50S ribosomal protein L23 OS=Methylobacterium extorquens (strain PA1) GN=rplW PE=3 SV=1 | 106 | 174 | 3.0E-07 |
| sp|B7L0R3|RL23_METC4 | 50S ribosomal protein L23 OS=Methylobacterium extorquens (strain CM4 / NCIMB 13688) GN=rplW PE=3 SV=1 | 106 | 174 | 3.0E-07 |
| sp|B2A4E1|RL23_NATTJ | 50S ribosomal protein L23 OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=rplW PE=3 SV=1 | 108 | 186 | 4.0E-07 |
| sp|C5CC60|RL23_MICLC | 50S ribosomal protein L23 OS=Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) GN=rplW PE=3 SV=1 | 101 | 172 | 4.0E-07 |
| sp|A5GAW7|RL23_GEOUR | 50S ribosomal protein L23 OS=Geobacter uraniireducens (strain Rf4) GN=rplW PE=3 SV=1 | 108 | 177 | 5.0E-07 |
| sp|Q9ZI48|RL23_AQUPY | 50S ribosomal protein L23 OS=Aquifex pyrophilus GN=rplW PE=3 SV=1 | 111 | 177 | 6.0E-07 |
| sp|B1YGV2|RL23_EXIS2 | 50S ribosomal protein L23 OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=rplW PE=3 SV=1 | 117 | 185 | 7.0E-07 |
| sp|B5FG11|RL23_VIBFM | 50S ribosomal protein L23 OS=Vibrio fischeri (strain MJ11) GN=rplW PE=3 SV=1 | 116 | 182 | 9.0E-07 |
| sp|Q5E8B3|RL23_VIBF1 | 50S ribosomal protein L23 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=rplW PE=3 SV=1 | 116 | 182 | 9.0E-07 |
| sp|Q97BX5|RL23_THEVO | 50S ribosomal protein L23P OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=rpl23p PE=3 SV=1 | 113 | 191 | 1.0E-06 |
| sp|A1S220|RL23_SHEAM | 50S ribosomal protein L23 OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=rplW PE=3 SV=1 | 112 | 182 | 2.0E-06 |
| sp|Q9Z9L2|RL23_BACHD | 50S ribosomal protein L23 OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=rplW PE=3 SV=1 | 135 | 185 | 2.0E-06 |
| sp|C3PKQ4|RL23_CORA7 | 50S ribosomal protein L23 OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=rplW PE=3 SV=1 | 114 | 186 | 2.0E-06 |
| sp|Q0BUP8|RL23_GRABC | 50S ribosomal protein L23 OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=rplW PE=3 SV=1 | 99 | 190 | 3.0E-06 |
| sp|B8IS87|RL23_METNO | 50S ribosomal protein L23 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rplW PE=3 SV=1 | 106 | 174 | 4.0E-06 |
| sp|Q6F7R4|RL23_ACIAD | 50S ribosomal protein L23 OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=rplW PE=3 SV=1 | 111 | 182 | 4.0E-06 |
| sp|Q3A9R8|RL23_CARHZ | 50S ribosomal protein L23 OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) GN=rplW PE=3 SV=1 | 114 | 179 | 4.0E-06 |
| sp|C1CP90|RL23_STRZT | 50S ribosomal protein L23 OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=rplW PE=3 SV=1 | 108 | 186 | 4.0E-06 |
| sp|C1CI99|RL23_STRZP | 50S ribosomal protein L23 OS=Streptococcus pneumoniae (strain P1031) GN=rplW PE=3 SV=1 | 108 | 186 | 4.0E-06 |
| sp|C1CC08|RL23_STRZJ | 50S ribosomal protein L23 OS=Streptococcus pneumoniae (strain JJA) GN=rplW PE=3 SV=1 | 108 | 186 | 4.0E-06 |
| sp|Q8CWV6|RL23_STRR6 | 50S ribosomal protein L23 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=rplW PE=3 SV=1 | 108 | 186 | 4.0E-06 |
| sp|B2IS42|RL23_STRPS | 50S ribosomal protein L23 OS=Streptococcus pneumoniae (strain CGSP14) GN=rplW PE=3 SV=1 | 108 | 186 | 4.0E-06 |
| sp|Q97SV3|RL23_STRPN | 50S ribosomal protein L23 OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) GN=rplW PE=3 SV=1 | 108 | 186 | 4.0E-06 |
| sp|B8ZKF9|RL23_STRPJ | 50S ribosomal protein L23 OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=rplW PE=3 SV=1 | 108 | 186 | 4.0E-06 |
| sp|B1I8K0|RL23_STRPI | 50S ribosomal protein L23 OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=rplW PE=3 SV=1 | 108 | 186 | 4.0E-06 |
| sp|C1CAL4|RL23_STRP7 | 50S ribosomal protein L23 OS=Streptococcus pneumoniae (strain 70585) GN=rplW PE=3 SV=1 | 108 | 186 | 4.0E-06 |
| sp|B5E6F7|RL23_STRP4 | 50S ribosomal protein L23 OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=rplW PE=3 SV=1 | 108 | 186 | 4.0E-06 |
| sp|Q04MN4|RL23_STRP2 | 50S ribosomal protein L23 OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=rplW PE=3 SV=1 | 108 | 186 | 4.0E-06 |
| sp|Q9HIR1|RL23_THEAC | 50S ribosomal protein L23P OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=rpl23p PE=3 SV=1 | 114 | 191 | 4.0E-06 |
| sp|A8AZM3|RL23_STRGC | 50S ribosomal protein L23 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rplW PE=3 SV=1 | 108 | 186 | 5.0E-06 |
| sp|Q6LVB4|RL23_PHOPR | 50S ribosomal protein L23 OS=Photobacterium profundum GN=rplW PE=3 SV=1 | 116 | 188 | 5.0E-06 |
| sp|B0UHW7|RL23_METS4 | 50S ribosomal protein L23 OS=Methylobacterium sp. (strain 4-46) GN=rplW PE=3 SV=1 | 111 | 174 | 5.0E-06 |
| sp|Q30Z44|RL23_DESAG | 50S ribosomal protein L23 OS=Desulfovibrio alaskensis (strain G20) GN=rplW PE=3 SV=1 | 108 | 185 | 5.0E-06 |
| sp|Q5WLR0|RL23_BACSK | 50S ribosomal protein L23 OS=Bacillus clausii (strain KSM-K16) GN=rplW PE=3 SV=1 | 108 | 185 | 5.0E-06 |
| sp|Q8NT06|RL23_CORGL | 50S ribosomal protein L23 OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=rplW PE=3 SV=1 | 114 | 188 | 6.0E-06 |
| sp|A4QBI2|RL23_CORGB | 50S ribosomal protein L23 OS=Corynebacterium glutamicum (strain R) GN=rplW PE=3 SV=1 | 114 | 188 | 6.0E-06 |
| sp|Q0AUI2|RL23_SYNWW | 50S ribosomal protein L23 OS=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) GN=rplW PE=3 SV=1 | 108 | 164 | 7.0E-06 |
| sp|O66433|RL23_AQUAE | 50S ribosomal protein L23 OS=Aquifex aeolicus (strain VF5) GN=rplW PE=3 SV=1 | 111 | 174 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003735 | structural constituent of ribosome | Yes |
| GO:0006412 | translation | Yes |
| GO:0005840 | ribosome | Yes |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0043229 | intracellular organelle | No |
| GO:0019538 | protein metabolic process | No |
| GO:0043603 | cellular amide metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0044271 | cellular nitrogen compound biosynthetic process | No |
| GO:0043232 | intracellular non-membrane-bounded organelle | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0043043 | peptide biosynthetic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0034645 | cellular macromolecule biosynthetic process | No |
| GO:0005575 | cellular_component | No |
| GO:0009058 | biosynthetic process | No |
| GO:0043604 | amide biosynthetic process | No |
| GO:0008152 | metabolic process | No |
| GO:1901566 | organonitrogen compound biosynthetic process | No |
| GO:0006518 | peptide metabolic process | No |
| GO:0043226 | organelle | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0005198 | structural molecule activity | No |
| GO:0009059 | macromolecule biosynthetic process | No |
| GO:0043228 | non-membrane-bounded organelle | No |
| GO:0003674 | molecular_function | No |
| GO:0044238 | primary metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0044260 | cellular macromolecule metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 67 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|098120 MPSSVKGRWGRVHTPRIDDDSTQTSVGIPSLLLQDMATTKTTKGKAAAKSAASKDNKAKAAKKAALQGAHSHSSR KTRTSVSFHRPKTLRLPREPKYERKSINHAPRMDQYRTIVSPLNTESAMKKIEEHNTLVFIVDVRANKRQIKDAV KKLYDVDAAKVNTLIRPDGKKKAYVRLTADADALDVANKIGFI* |
| Coding | >AgabiH97|098120 ATGCCGAGTTCCGTAAAAGGAAGGTGGGGCCGTGTACACACGCCGAGGATTGACGACGACAGTACCCAAACCTCC GTCGGCATACCCTCTCTCCTCCTTCAAGACATGGCTACGACGAAAACTACCAAGGGCAAGGCTGCCGCCAAGAGT GCAGCATCGAAGGATAACAAGGCCAAGGCGGCGAAAAAGGCAGCGCTTCAAGGTGCTCACTCGCATAGCTCACGA AAAACGCGCACGTCGGTGTCGTTCCACCGTCCCAAGACGCTGAGGTTGCCTCGTGAACCCAAGTATGAACGGAAA TCGATCAACCATGCGCCTCGCATGGATCAGTACCGGACTATTGTCTCTCCACTCAATACGGAGTCTGCGATGAAG AAGATTGAGGAGCACAATACGCTGGTGTTTATTGTGGATGTGAGGGCGAACAAGCGTCAGATCAAGGACGCGGTG AAAAAGCTGTATGATGTGGATGCGGCCAAGGTGAACACGCTGATCCGACCTGATGGGAAGAAGAAGGCGTATGTG CGGTTGACGGCAGACGCGGATGCGCTGGATGTGGCGAACAAGATTGGATTCATTTAG |
| Transcript | >AgabiH97|098120 ATGCCGAGTTCCGTAAAAGGAAGGTGGGGCCGTGTACACACGCCGAGGATTGACGACGACAGTACCCAAACCTCC GTCGGCATACCCTCTCTCCTCCTTCAAGACATGGCTACGACGAAAACTACCAAGGGCAAGGCTGCCGCCAAGAGT GCAGCATCGAAGGATAACAAGGCCAAGGCGGCGAAAAAGGCAGCGCTTCAAGGTGCTCACTCGCATAGCTCACGA AAAACGCGCACGTCGGTGTCGTTCCACCGTCCCAAGACGCTGAGGTTGCCTCGTGAACCCAAGTATGAACGGAAA TCGATCAACCATGCGCCTCGCATGGATCAGTACCGGACTATTGTCTCTCCACTCAATACGGAGTCTGCGATGAAG AAGATTGAGGAGCACAATACGCTGGTGTTTATTGTGGATGTGAGGGCGAACAAGCGTCAGATCAAGGACGCGGTG AAAAAGCTGTATGATGTGGATGCGGCCAAGGTGAACACGCTGATCCGACCTGATGGGAAGAAGAAGGCGTATGTG CGGTTGACGGCAGACGCGGATGCGCTGGATGTGGCGAACAAGATTGGATTCATTTAG |
| Gene | >AgabiH97|098120 ATGCCGAGTTCCGTAAAAGGAAGGTGGGGCCGTGTACACACGCCGAGGATTGACGACGACAGTACCCAAACCTCC GTCGGCATACCCTCTCTCCTCCTTCAAGGTGAGTAATTTATGCCCAGATTATGAATGATGTGCGGTTGCAGGACG TGTTTGGCGTGGATTTGGAGGATAGTGGATGGATTGGTGGGATGGATGCGTGGATGCGGTTTTGGATGATGATGC CGCTTTTTGTTGGGTTCTCATAATTTACAATTGAATGCTGACTTGGTTTTATAGACATGGCTACGACGAAAACTA CCAAGGGCAAGGCTGCCGCCAAGAGTGGTGTGTTCATTGTTTTGAAATGATGGGGGGGGAGTATTAATGGGTTGT AGCAGCATCGAAGGATAACAAGGCCAAGGCGGCGAAAAAGGCAGCGCTTCAAGGTGCTCACTCGCATAGCTCACG AAAAACGCGCACGTCGGTGTCGTTCCACCGTCCCAAGACGCTGAGGTTGCCTCGTGAACCCAAGTATGAACGGAA ATCGATCAACCATGCGCCTCGCATGGATCAGTACCGGACTATTGTCTCGTGAGTGGTTGTGGTGTTTTTTGATTA TTGTGAAGTCTGAGGATGGTTAGTCCACTCAATACGGAGTCTGCGATGAAGAAGATTGAGGAGCACAATACGCTG GTGTTTATTGTGGATGTGAGGGCGAACAAGCGTCAGATCAAGGACGCGGTGAAAAAGCTGTATGATGTGGATGCG GCCAAGGTGAACACGCTGATCCGACCTGATGGGAAGAAGAAGGCGTATGTGCGGTTGACGGCAGACGCGGATGCG CTGGATGTGGCGAACAAGGTCAGTGAATTGTGTGATGTATGCTAACGTGTGTCTAATATTCGATGGTAGATTGGA TTCATTTAG |