Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|097540
Gene name
Locationscaffold_7:85470..89131
Strand+
Gene length (bp)3661
Transcript length (bp)2838
Coding sequence length (bp)2838
Protein length (aa) 946

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01644 Chitin_synth_1 Chitin synthase 7.2E-79 275 437
PF08407 Chitin_synth_1N Chitin synthase N-terminal 2.4E-28 203 274
PF03142 Chitin_synth_2 Chitin synthase 1.6E-17 415 602

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P30599|CHS2_USTMA Chitin synthase 2 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS2 PE=3 SV=2 188 943 0.0E+00
sp|Q99127|CHS4_USTMA Chitin synthase 4 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS4 PE=3 SV=2 9 945 0.0E+00
sp|Q92197|CHSC_ASPFU Chitin synthase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=chsC PE=3 SV=2 109 937 0.0E+00
sp|P30602|CHS3_EXODE Chitin synthase 3 OS=Exophiala dermatitidis GN=CHS3 PE=3 SV=2 197 900 0.0E+00
sp|P29070|CHS1_NEUCR Chitin synthase 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=chs-1 PE=3 SV=2 168 937 0.0E+00
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|P30599|CHS2_USTMA Chitin synthase 2 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS2 PE=3 SV=2 188 943 0.0E+00
sp|Q99127|CHS4_USTMA Chitin synthase 4 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS4 PE=3 SV=2 9 945 0.0E+00
sp|Q92197|CHSC_ASPFU Chitin synthase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=chsC PE=3 SV=2 109 937 0.0E+00
sp|P30602|CHS3_EXODE Chitin synthase 3 OS=Exophiala dermatitidis GN=CHS3 PE=3 SV=2 197 900 0.0E+00
sp|P29070|CHS1_NEUCR Chitin synthase 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=chs-1 PE=3 SV=2 168 937 0.0E+00
sp|Q00757|CHSB_EMENI Chitin synthase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chsB PE=2 SV=2 197 937 0.0E+00
sp|P30598|CHS1_USTMA Chitin synthase 1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS1 PE=3 SV=3 83 940 0.0E+00
sp|P54267|CHSG_ASPFU Chitin synthase G OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=chsG PE=2 SV=2 197 937 0.0E+00
sp|P23316|CHS1_CANAX Chitin synthase 1 OS=Candida albicans GN=CHS1 PE=2 SV=2 195 938 0.0E+00
sp|P08004|CHS1_YEAST Chitin synthase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CHS1 PE=1 SV=2 194 942 0.0E+00
sp|P14180|CHS2_YEAST Chitin synthase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CHS2 PE=1 SV=1 214 940 0.0E+00
sp|P30572|CHS2_CANAX Chitin synthase 2 OS=Candida albicans GN=CHS2 PE=2 SV=2 161 941 0.0E+00
sp|P30600|CHS1_EXODE Chitin synthase 1 OS=Exophiala dermatitidis GN=CHS1 PE=3 SV=2 218 944 0.0E+00
sp|P30589|CHS2_NEUCR Chitin synthase 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=chs-2 PE=3 SV=4 130 944 0.0E+00
sp|P87073|CHS1_PHYB8 Chitin synthase 1 OS=Phycomyces blakesleeanus (strain ATCC 8743b / FGSC 10004 / NBRC 33097 / NRRL 1555) GN=chs1 PE=3 SV=1 186 944 0.0E+00
sp|P30595|CHS2_RHIOL Chitin synthase 2 OS=Rhizopus oligosporus GN=CHS2 PE=3 SV=1 182 944 0.0E+00
sp|P30594|CHS1_RHIOL Chitin synthase 1 OS=Rhizopus oligosporus GN=CHS1 PE=3 SV=1 147 944 0.0E+00
sp|Q99126|CHS3_USTMA Chitin synthase 3 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS3 PE=3 SV=2 156 944 0.0E+00
sp|P30597|CHS1_SCHPO Chitin synthase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=chs1 PE=3 SV=2 173 945 0.0E+00
sp|Q92444|CHS2_PARBR Chitin synthase 2 OS=Paracoccidioides brasiliensis GN=CHS2 PE=3 SV=2 25 941 0.0E+00
sp|P30583|CHSC_EMENI Chitin synthase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chsC PE=3 SV=3 197 944 0.0E+00
sp|P30601|CHS2_EXODE Chitin synthase 2 OS=Exophiala dermatitidis GN=CHS2 PE=3 SV=2 124 945 0.0E+00
sp|Q12564|CHSA_AMPQU Chitin synthase A OS=Ampelomyces quisqualis GN=CHSA PE=3 SV=1 197 944 0.0E+00
sp|P30588|CHS3_NEUCR Chitin synthase 3 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=chs-3 PE=3 SV=2 197 944 0.0E+00
sp|P30584|CHSA_EMENI Chitin synthase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chsA PE=3 SV=2 170 942 0.0E+00
sp|Q12632|CHS1_MUCCL Chitin synthase 1 OS=Mucor circinelloides f. lusitanicus GN=CHS1 PE=3 SV=1 95 942 0.0E+00
sp|O74756|CHS2_SCHPO Chitin synthase-like protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=chs2 PE=3 SV=1 203 943 7.0E-124
sp|P30596|CHS1_SCHCO Chitin synthase 1 (Fragment) OS=Schizophyllum commune GN=CHS1 PE=3 SV=1 280 468 6.0E-118
sp|P48017|CHS_SAPMO Chitin synthase OS=Saprolegnia monoica GN=CHS PE=3 SV=1 233 843 2.0E-101
sp|P30582|CHS2_ASPNG Chitin synthase 2 (Fragment) OS=Aspergillus niger GN=chs2 PE=3 SV=1 283 468 7.0E-89
sp|P30578|CHS3_AJECA Chitin synthase 3 (Fragment) OS=Ajellomyces capsulatus GN=CHS3 PE=3 SV=1 283 468 7.0E-88
sp|P30580|CHS2_AJEDE Chitin synthase 2 (Fragment) OS=Ajellomyces dermatitidis GN=CHS2 PE=3 SV=1 283 468 7.0E-87
sp|P30591|CHS2_EXOEX Chitin synthase 2 (Fragment) OS=Exophiala exophialae GN=CHS2 PE=3 SV=2 283 468 3.0E-84
sp|P30586|CHS2_EXOJE Chitin synthase 2 (Fragment) OS=Exophiala jeanselmei GN=CHS2 PE=3 SV=2 283 467 3.0E-84
sp|P49603|CHS1_BOTFU Chitin synthase 1 (Fragment) OS=Botryotinia fuckeliana GN=chs1 PE=3 SV=1 282 467 8.0E-81
sp|P55003|CHS1_TUBUN Chitin synthase 1 (Fragment) OS=Tuber uncinatum GN=CHS1 PE=3 SV=1 283 468 2.0E-80
sp|P30604|CHS2_XYLBA Chitin synthase 2 (Fragment) OS=Xylohypha bantiana GN=CHS2 PE=3 SV=1 283 468 6.0E-77
sp|P30581|CHS1_ASPNG Chitin synthase 1 (Fragment) OS=Aspergillus niger GN=chs1 PE=3 SV=1 282 468 4.0E-73
sp|P30579|CHS1_AJEDE Chitin synthase 1 (Fragment) OS=Ajellomyces dermatitidis GN=CHS1 PE=3 SV=1 282 468 4.0E-73
sp|P30576|CHS1_AJECA Chitin synthase 1 (Fragment) OS=Ajellomyces capsulatus GN=CHS1 PE=3 SV=1 282 468 3.0E-72
sp|P30590|CHS1_EXOEX Chitin synthase 1 (Fragment) OS=Exophiala exophialae GN=CHS1 PE=3 SV=1 280 467 2.0E-71
sp|P30585|CHS1_EXOJE Chitin synthase 1 (Fragment) OS=Exophiala jeanselmei GN=CHS1 PE=3 SV=1 280 467 5.0E-70
sp|P30592|CHS1_RHIAT Chitin synthase 1 (Fragment) OS=Rhinocladiella atrovirens GN=CHS1 PE=3 SV=1 280 467 1.0E-69
sp|P30603|CHS1_XYLBA Chitin synthase 1 (Fragment) OS=Xylohypha bantiana GN=CHS1 PE=3 SV=1 282 467 2.0E-68
sp|P30593|CHS2_RHIAT Chitin synthase 2 (Fragment) OS=Rhinocladiella atrovirens GN=CHS2 PE=3 SV=1 282 468 7.0E-58
sp|P30577|CHS2_AJECA Chitin synthase 2 (Fragment) OS=Ajellomyces capsulatus GN=CHS2 PE=3 SV=1 282 467 3.0E-56
sp|P30587|CHS3_EXOJE Chitin synthase 3 (Fragment) OS=Exophiala jeanselmei GN=CHS3 PE=3 SV=1 283 468 7.0E-53
sp|Q01285|CHS4_NEUCR Chitin synthase 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=chs-4 PE=3 SV=3 414 620 2.0E-11
sp|O13353|CHS4_MAGO7 Chitin synthase 4 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CHS4 PE=3 SV=2 415 620 3.0E-11
sp|P78611|CHSD_EMENI Chitin synthase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chsD PE=3 SV=4 415 620 6.0E-11
sp|Q4P9K9|CHS8_USTMA Chitin synthase 8 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS8 PE=3 SV=1 419 601 6.0E-11
sp|O13356|CHS1_CRYNH Chitin synthase 1 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) GN=CHS1 PE=3 SV=2 417 609 3.0E-10
sp|Q4P333|CHS7_USTMA Chitin synthase 7 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS7 PE=3 SV=1 415 620 3.0E-10
sp|P30573|CHS3_CANAX Chitin synthase 3 OS=Candida albicans GN=CHS3 PE=3 SV=1 415 620 5.0E-10
sp|O13395|CHS6_USTMA Chitin synthase 6 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS6 PE=3 SV=2 417 588 7.0E-10
sp|P29465|CHS3_YEAST Chitin synthase 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CHS3 PE=1 SV=3 417 651 2.0E-09
sp|O13394|CHS5_USTMA Chitin synthase 5 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS5 PE=3 SV=3 415 619 8.0E-09
sp|J9VXM5|CHS3_CRYNH Chitin synthase 3 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) GN=CHS3 PE=3 SV=1 403 691 1.0E-08
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GO

GO Term Description Terminal node
GO:0004100 chitin synthase activity Yes
GO:0006031 chitin biosynthetic process Yes
GO:0046349 amino sugar biosynthetic process No
GO:0016757 glycosyltransferase activity No
GO:0008194 UDP-glycosyltransferase activity No
GO:0006022 aminoglycan metabolic process No
GO:0009058 biosynthetic process No
GO:1901071 glucosamine-containing compound metabolic process No
GO:1901073 glucosamine-containing compound biosynthetic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0008375 acetylglucosaminyltransferase activity No
GO:0071704 organic substance metabolic process No
GO:0008150 biological_process No
GO:1901137 carbohydrate derivative biosynthetic process No
GO:0006023 aminoglycan biosynthetic process No
GO:1901576 organic substance biosynthetic process No
GO:0006040 amino sugar metabolic process No
GO:0008152 metabolic process No
GO:1901566 organonitrogen compound biosynthetic process No
GO:0043170 macromolecule metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0016740 transferase activity No
GO:1901135 carbohydrate derivative metabolic process No
GO:0009059 macromolecule biosynthetic process No
GO:0003674 molecular_function No
GO:0006030 chitin metabolic process No
GO:0003824 catalytic activity No
GO:0016758 hexosyltransferase activity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane Signal peptide|Transmembrane domain 0.1368 0.0534 0.0429 0.6499 0.0685 0.0031 0.5555 0.4332 0.5159 0.0035

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 630 652 22
2 673 692 19
3 702 724 22
4 748 770 22
5 780 802 22
6 883 900 17
7 910 932 22

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
GT2_Chitin_synth_1 1.4E-80 275 437

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Casing Casing mycelium 42.51 25.47 59.55
Initials Initials knots 32.98 19.79 46.17
Pileal_Stipeal_center Stage I stipe center 52.55 31.25 73.85
Pileal_Stipeal_shell Stage I stipe shell 37.20 22.36 52.04
DIF_stipe_center Stage II stipe center 54.44 32.45 76.42
DIF_stipe_shell Stage II stipe shell 53.89 32.12 75.66
DIF_stipe_skin Stage II stipe skin 43.23 25.73 60.72
DIF_cap_skin Stage II cap skin 41.37 24.81 57.93
DIF_cap_tissue Stage II cap tissue 43.43 26.00 60.86
DIF_gill_tissue Stage II gill tissue 47.16 28.13 66.19
YFB_stipe_center Young fruiting body stipe center 48.69 29.02 68.36
YFB_stipe_shell Young fruiting body stipe shell 53.41 31.89 74.93
YFB_stipe_skin Young fruiting body stipe skin 40.12 24.11 56.13
YFB_cap_skin Young fruiting body cap skin 32.11 19.24 44.99
YFB_cap_tissue Young fruiting body cap tissue 48.34 28.97 67.72
YFB_gill_tissue Young fruiting body gill tissue 37.40 22.46 52.34
YFB_veil Young fruiting body veil 37.32 22.36 52.28

Differential expression

Label1 Label2 Q-value Significant difference
Casing DIF_gill_tissue 0.822601 no
Casing YFB_stipe_center 0.746371 no
Casing YFB_stipe_shell 0.510021 no
Casing YFB_stipe_skin 0.908044 no
Casing YFB_cap_skin 0.384811 no
Casing YFB_cap_tissue 0.759370 no
Casing YFB_gill_tissue 0.760869 no
Casing YFB_veil 0.756067 no
Casing Initials 0.446989 no
Casing Pileal_Stipeal_center 0.556701 no
Casing Pileal_Stipeal_shell 0.748687 no
Casing DIF_stipe_center 0.470301 no
Casing DIF_stipe_shell 0.487712 no
Casing DIF_stipe_skin 0.975087 no
Casing DIF_cap_skin 0.959425 no
Casing DIF_cap_tissue 0.967341 no
DIF_gill_tissue YFB_stipe_center 0.954012 no
DIF_gill_tissue YFB_stipe_shell 0.777121 no
DIF_gill_tissue YFB_stipe_skin 0.682746 no
DIF_gill_tissue YFB_cap_skin 0.186180 no
DIF_gill_tissue YFB_cap_tissue 0.963779 no
DIF_gill_tissue YFB_gill_tissue 0.506942 no
DIF_gill_tissue YFB_veil 0.499546 no
YFB_stipe_center YFB_stipe_shell 0.847493 no
YFB_stipe_center YFB_stipe_skin 0.602293 no
YFB_stipe_center YFB_cap_skin 0.147141 no
YFB_stipe_center YFB_cap_tissue 0.989084 no
YFB_stipe_center YFB_gill_tissue 0.431906 no
YFB_stipe_center YFB_veil 0.426481 no
YFB_stipe_shell YFB_stipe_skin 0.375440 no
YFB_stipe_shell YFB_cap_skin 0.056367 no
YFB_stipe_shell YFB_cap_tissue 0.829918 no
YFB_stipe_shell YFB_gill_tissue 0.229147 no
YFB_stipe_shell YFB_veil 0.224247 no
YFB_stipe_skin YFB_cap_skin 0.523866 no
YFB_stipe_skin YFB_cap_tissue 0.615102 no
YFB_stipe_skin YFB_gill_tissue 0.886627 no
YFB_stipe_skin YFB_veil 0.883436 no
YFB_cap_skin YFB_cap_tissue 0.146459 no
YFB_cap_skin YFB_gill_tissue 0.704058 no
YFB_cap_skin YFB_veil 0.709390 no
YFB_cap_tissue YFB_gill_tissue 0.434863 no
YFB_cap_tissue YFB_veil 0.429462 no
YFB_gill_tissue YFB_veil 0.995749 no
Initials DIF_gill_tissue 0.234408 no
Initials YFB_stipe_center 0.179826 no
Initials YFB_stipe_shell 0.081238 no
Initials YFB_stipe_skin 0.591202 no
Initials YFB_cap_skin 0.959887 no
Initials YFB_cap_tissue 0.183562 no
Initials YFB_gill_tissue 0.766897 no
Initials YFB_veil 0.772428 no
Initials Pileal_Stipeal_center 0.090997 no
Initials Pileal_Stipeal_shell 0.781835 no
Initials DIF_stipe_center 0.065649 no
Initials DIF_stipe_shell 0.069387 no
Initials DIF_stipe_skin 0.412143 no
Initials DIF_cap_skin 0.514191 no
Initials DIF_cap_tissue 0.401721 no
Pileal_Stipeal_center DIF_gill_tissue 0.814373 no
Pileal_Stipeal_center YFB_stipe_center 0.877217 no
Pileal_Stipeal_center YFB_stipe_shell 0.977146 no
Pileal_Stipeal_center YFB_stipe_skin 0.409458 no
Pileal_Stipeal_center YFB_cap_skin 0.071041 no
Pileal_Stipeal_center YFB_cap_tissue 0.860887 no
Pileal_Stipeal_center YFB_gill_tissue 0.257674 no
Pileal_Stipeal_center YFB_veil 0.254103 no
Pileal_Stipeal_center Pileal_Stipeal_shell 0.249626 no
Pileal_Stipeal_center DIF_stipe_center 0.947054 no
Pileal_Stipeal_center DIF_stipe_shell 0.963506 no
Pileal_Stipeal_center DIF_stipe_skin 0.601376 no
Pileal_Stipeal_center DIF_cap_skin 0.487063 no
Pileal_Stipeal_center DIF_cap_tissue 0.610121 no
Pileal_Stipeal_shell DIF_gill_tissue 0.496484 no
Pileal_Stipeal_shell YFB_stipe_center 0.414707 no
Pileal_Stipeal_shell YFB_stipe_shell 0.216986 no
Pileal_Stipeal_shell YFB_stipe_skin 0.873805 no
Pileal_Stipeal_shell YFB_cap_skin 0.716171 no
Pileal_Stipeal_shell YFB_cap_tissue 0.417545 no
Pileal_Stipeal_shell YFB_gill_tissue 0.991476 no
Pileal_Stipeal_shell YFB_veil 0.994465 no
Pileal_Stipeal_shell DIF_stipe_center 0.194125 no
Pileal_Stipeal_shell DIF_stipe_shell 0.201152 no
Pileal_Stipeal_shell DIF_stipe_skin 0.711764 no
Pileal_Stipeal_shell DIF_cap_skin 0.813210 no
Pileal_Stipeal_shell DIF_cap_tissue 0.697352 no
DIF_stipe_center DIF_gill_tissue 0.735645 no
DIF_stipe_center YFB_stipe_center 0.805911 no
DIF_stipe_center YFB_stipe_shell 0.973729 no
DIF_stipe_center YFB_stipe_skin 0.335521 no
DIF_stipe_center YFB_cap_skin 0.048834 yes
DIF_stipe_center YFB_cap_tissue 0.785993 no
DIF_stipe_center YFB_gill_tissue 0.200323 no
DIF_stipe_center YFB_veil 0.198175 no
DIF_stipe_center DIF_stipe_shell 0.986148 no
DIF_stipe_center DIF_stipe_skin 0.514373 no
DIF_stipe_center DIF_cap_skin 0.407219 no
DIF_stipe_center DIF_cap_tissue 0.526001 no
DIF_stipe_shell DIF_gill_tissue 0.759081 no
DIF_stipe_shell YFB_stipe_center 0.824166 no
DIF_stipe_shell YFB_stipe_shell 0.986821 no
DIF_stipe_shell YFB_stipe_skin 0.356206 no
DIF_stipe_shell YFB_cap_skin 0.057945 no
DIF_stipe_shell YFB_cap_tissue 0.805537 no
DIF_stipe_shell YFB_gill_tissue 0.218316 no
DIF_stipe_shell YFB_veil 0.215620 no
DIF_stipe_shell DIF_stipe_skin 0.540581 no
DIF_stipe_shell DIF_cap_skin 0.426625 no
DIF_stipe_shell DIF_cap_tissue 0.551896 no
DIF_stipe_skin DIF_gill_tissue 0.859404 no
DIF_stipe_skin YFB_stipe_center 0.786628 no
DIF_stipe_skin YFB_stipe_shell 0.562466 no
DIF_stipe_skin YFB_stipe_skin 0.879025 no
DIF_stipe_skin YFB_cap_skin 0.358230 no
DIF_stipe_skin YFB_cap_tissue 0.800214 no
DIF_stipe_skin YFB_gill_tissue 0.725815 no
DIF_stipe_skin YFB_veil 0.720859 no
DIF_stipe_skin DIF_cap_skin 0.935464 no
DIF_stipe_skin DIF_cap_tissue 0.992640 no
DIF_cap_skin DIF_gill_tissue 0.764392 no
DIF_cap_skin YFB_stipe_center 0.683444 no
DIF_cap_skin YFB_stipe_shell 0.442685 no
DIF_cap_skin YFB_stipe_skin 0.954144 no
DIF_cap_skin YFB_cap_skin 0.446922 no
DIF_cap_skin YFB_cap_tissue 0.693368 no
DIF_cap_skin YFB_gill_tissue 0.823481 no
DIF_cap_skin YFB_veil 0.819501 no
DIF_cap_skin DIF_cap_tissue 0.924631 no
DIF_cap_tissue DIF_gill_tissue 0.865923 no
DIF_cap_tissue YFB_stipe_center 0.796012 no
DIF_cap_tissue YFB_stipe_shell 0.570435 no
DIF_cap_tissue YFB_stipe_skin 0.867614 no
DIF_cap_tissue YFB_cap_skin 0.337483 no
DIF_cap_tissue YFB_cap_tissue 0.808781 no
DIF_cap_tissue YFB_gill_tissue 0.710632 no
DIF_cap_tissue YFB_veil 0.706492 no

Orthologs

Orthofinder run ID1
Orthogroup4815
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|097540
Agaricus bisporus var bisporus H97 AgabiH97|097540 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|170_2

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|097540
MSNYNQADEAQHHHYNDGYAPYPSPYDQYQAPIPNPFASPPGPPHTVPPPTAFSPPPPPPPSHYANPFDGQGYPV
TSPPPVILSSSPPHLPQHTSPPPPPPQPSMLSGPFQAPGPPPLNPSSNSLHSKPSHGYSRYDMHDDTAGIEDHEM
PLLRRDASHGTTYLNMPGGDYDNENGNEEEEPEARIRYGRLPQRVPRRYKTIKRVELFQGNFVLDNPVPSKLLEM
CPNKSEREFTHMRYSAATCDPNSFKDEGFTLRQVLHDPPRRTELFIVMTMYNEEEDLFCRTFHGVVKNIAHLCKR
DRSKTWGKDGWKKVVVCIVSDGRQKINSRTLNVIAAMGAYQEGVAKNKIDDRPVTAHIYEYTTQVSVTPSMRIEG
ASKGVVPVQVIFCLKEKNQKKINSHRWFFNAFGPILQPNVCILLDVGTQPGPTSIYHLWKAFDINSNVGGACGEI
VALKGKWGLNLVNPLVAAQNFEYKMSNILDKPLESVFGYITVLPGAFSAYRYIALQNDSVGEGPLQKYFLGEKMH
GSGADIFTANMYLAEDRILCWELVSKRGGSWILHYVKSAYAVTDVPDQVPELISQRRRWLNGSFFAAVHSTIHFY
YIYRSSHTFLRKFWIHVEMLYQFFNLIFSWFALANYYIAFNILSTAMTVLVAGGTDPKLLTGAGPKAMSIFNHVF
NYFYLGLLIMCFILALGNRPQGSKWGYTLAILGFALITVYMTASALVLAVKGIQNVESAEGPLSVEDVFTNTIFR
NIVLSLLATLGLYLLASLIFFEPWHMITSFLQYVLMAPSYISVLNVYAFANVHDVSWGTKGDNKVNTDLGVVKTS
EDGKSTEVEINVPTNEKDINLLYEEALHVLNHAPPKVESKPDAGTVQEDYYRSFRTNVLLAWTLSNALLAAVITA
TNDVSSANKAVNGYMAFLLYSVAGLALVRFVGSATYMVVRLFAGE*
Coding >AgabiH97|097540
ATGTCCAACTATAACCAGGCCGACGAGGCCCAGCACCACCACTACAACGACGGCTATGCGCCCTACCCGTCGCCC
TACGATCAATACCAAGCCCCCATCCCAAATCCATTCGCAAGTCCACCCGGCCCGCCCCATACTGTCCCACCTCCT
ACTGCTTTCTCTCCACCACCACCACCACCACCCTCCCACTATGCTAATCCTTTTGACGGGCAGGGTTACCCCGTC
ACATCGCCTCCTCCCGTCATTCTTTCCTCTTCCCCTCCTCATCTTCCACAACACACTTCTCCTCCACCACCACCA
CCCCAACCCTCCATGCTCTCCGGCCCTTTCCAAGCTCCAGGTCCCCCGCCCCTCAATCCATCCTCAAATTCTTTA
CACTCCAAACCATCACATGGATATTCTCGGTATGACATGCATGACGATACCGCTGGTATAGAGGATCACGAGATG
CCACTTTTACGACGAGATGCTTCGCATGGGACTACATATCTGAATATGCCTGGAGGGGATTACGATAATGAGAAT
GGTAATGAGGAGGAAGAACCGGAGGCGAGGATTAGATATGGGCGTTTACCGCAACGTGTGCCTAGACGCTACAAG
ACGATTAAACGCGTAGAGTTATTTCAAGGAAACTTTGTCCTCGACAACCCTGTTCCCTCGAAACTTCTAGAAATG
TGTCCTAACAAATCCGAACGCGAATTCACTCACATGCGCTACTCAGCCGCCACATGCGATCCCAACTCTTTCAAA
GACGAAGGCTTCACTCTTCGTCAAGTCTTACACGACCCTCCTCGTCGTACAGAACTCTTCATCGTCATGACCATG
TATAATGAAGAAGAAGATTTATTTTGTCGTACTTTTCATGGTGTCGTTAAGAATATTGCTCATTTGTGTAAGAGG
GATAGAAGTAAGACGTGGGGGAAGGATGGATGGAAGAAGGTTGTGGTCTGTATTGTGAGTGATGGGAGACAGAAG
ATTAATTCGAGGACTTTGAATGTCATTGCGGCTATGGGGGCTTATCAAGAGGGCGTGGCTAAGAATAAAATTGAT
GATAGACCTGTTACGGCGCATATTTACGAATATACCACCCAAGTCTCCGTCACTCCCTCCATGCGTATCGAAGGT
GCCTCCAAAGGCGTCGTCCCCGTCCAAGTCATCTTCTGCCTCAAAGAAAAAAACCAAAAAAAGATAAACTCCCAT
CGTTGGTTCTTCAACGCCTTTGGTCCCATCCTTCAACCCAACGTCTGTATTCTTCTCGATGTCGGTACGCAACCG
GGTCCTACGAGTATATATCATTTGTGGAAAGCGTTTGATATTAATTCGAATGTGGGGGGTGCGTGTGGGGAGATT
GTGGCTTTGAAGGGGAAGTGGGGGTTGAATTTGGTGAATCCGTTGGTGGCGGCGCAGAATTTTGAGTATAAGATG
TCGAATATTTTGGATAAGCCTTTGGAATCGGTGTTTGGGTATATTACGGTCTTGCCGGGTGCGTTTAGCGCGTAT
AGGTATATTGCGTTGCAGAATGATAGTGTGGGAGAAGGACCACTACAAAAATATTTTTTGGGTGAAAAAATGCAT
GGTTCGGGAGCGGACATTTTTACTGCGAATATGTATCTTGCTGAAGATCGTATTTTGTGTTGGGAATTGGTTTCG
AAACGAGGGGGGTCGTGGATTCTTCATTATGTTAAATCTGCTTATGCAGTAACAGACGTACCTGACCAAGTACCG
GAATTGATATCACAACGAAGACGGTGGTTGAATGGCTCGTTCTTTGCTGCCGTGCATAGTACAATCCACTTTTAT
TACATTTATAGGTCGTCGCATACTTTTTTGAGAAAGTTTTGGATTCATGTCGAGATGCTTTATCAGTTTTTCAAT
TTGATTTTTTCGTGGTTCGCTCTCGCAAATTATTATATAGCATTCAACATTTTATCAACGGCTATGACGGTCCTT
GTTGCAGGAGGTACAGATCCGAAATTGTTGACGGGGGCGGGACCAAAGGCGATGTCGATTTTTAATCATGTCTTT
AACTATTTTTATTTGGGGTTGTTGATTATGTGTTTTATTTTGGCGTTGGGGAATAGGCCGCAGGGGAGTAAGTGG
GGGTATACGTTGGCGATTTTGGGGTTTGCGTTGATTACGGTTTATATGACGGCTTCGGCGTTGGTGTTGGCGGTG
AAGGGGATACAGAATGTGGAGAGTGCGGAGGGACCTTTGTCGGTGGAGGATGTGTTTACGAATACGATATTTAGG
AATATCGTGCTTTCGTTGTTGGCGACTTTGGGGTTGTATCTTCTTGCTTCTTTGATCTTTTTTGAGCCGTGGCAT
ATGATTACATCGTTTTTGCAATATGTGCTTATGGCACCTTCGTATATATCCGTACTCAACGTCTACGCCTTTGCA
AACGTACATGACGTATCATGGGGAACGAAAGGCGATAACAAAGTCAACACTGATTTAGGTGTTGTCAAAACGTCT
GAAGACGGTAAATCGACGGAAGTGGAAATTAATGTGCCGACGAATGAGAAGGATATTAATTTGTTGTATGAGGAG
GCATTACATGTGTTGAATCATGCTCCACCGAAAGTGGAGAGTAAACCGGATGCGGGGACGGTTCAGGAAGATTAT
TATAGGAGTTTTAGAACAAATGTGTTGTTGGCGTGGACGTTGAGTAATGCGTTGTTGGCGGCGGTGATTACGGCG
ACGAATGATGTGAGTTCGGCGAATAAAGCTGTGAATGGGTATATGGCGTTTTTGTTGTATTCGGTTGCGGGACTT
GCTTTGGTGAGGTTTGTGGGTTCGGCGACGTATATGGTTGTTAGGTTGTTTGCGGGAGAGTAA
Transcript >AgabiH97|097540
ATGTCCAACTATAACCAGGCCGACGAGGCCCAGCACCACCACTACAACGACGGCTATGCGCCCTACCCGTCGCCC
TACGATCAATACCAAGCCCCCATCCCAAATCCATTCGCAAGTCCACCCGGCCCGCCCCATACTGTCCCACCTCCT
ACTGCTTTCTCTCCACCACCACCACCACCACCCTCCCACTATGCTAATCCTTTTGACGGGCAGGGTTACCCCGTC
ACATCGCCTCCTCCCGTCATTCTTTCCTCTTCCCCTCCTCATCTTCCACAACACACTTCTCCTCCACCACCACCA
CCCCAACCCTCCATGCTCTCCGGCCCTTTCCAAGCTCCAGGTCCCCCGCCCCTCAATCCATCCTCAAATTCTTTA
CACTCCAAACCATCACATGGATATTCTCGGTATGACATGCATGACGATACCGCTGGTATAGAGGATCACGAGATG
CCACTTTTACGACGAGATGCTTCGCATGGGACTACATATCTGAATATGCCTGGAGGGGATTACGATAATGAGAAT
GGTAATGAGGAGGAAGAACCGGAGGCGAGGATTAGATATGGGCGTTTACCGCAACGTGTGCCTAGACGCTACAAG
ACGATTAAACGCGTAGAGTTATTTCAAGGAAACTTTGTCCTCGACAACCCTGTTCCCTCGAAACTTCTAGAAATG
TGTCCTAACAAATCCGAACGCGAATTCACTCACATGCGCTACTCAGCCGCCACATGCGATCCCAACTCTTTCAAA
GACGAAGGCTTCACTCTTCGTCAAGTCTTACACGACCCTCCTCGTCGTACAGAACTCTTCATCGTCATGACCATG
TATAATGAAGAAGAAGATTTATTTTGTCGTACTTTTCATGGTGTCGTTAAGAATATTGCTCATTTGTGTAAGAGG
GATAGAAGTAAGACGTGGGGGAAGGATGGATGGAAGAAGGTTGTGGTCTGTATTGTGAGTGATGGGAGACAGAAG
ATTAATTCGAGGACTTTGAATGTCATTGCGGCTATGGGGGCTTATCAAGAGGGCGTGGCTAAGAATAAAATTGAT
GATAGACCTGTTACGGCGCATATTTACGAATATACCACCCAAGTCTCCGTCACTCCCTCCATGCGTATCGAAGGT
GCCTCCAAAGGCGTCGTCCCCGTCCAAGTCATCTTCTGCCTCAAAGAAAAAAACCAAAAAAAGATAAACTCCCAT
CGTTGGTTCTTCAACGCCTTTGGTCCCATCCTTCAACCCAACGTCTGTATTCTTCTCGATGTCGGTACGCAACCG
GGTCCTACGAGTATATATCATTTGTGGAAAGCGTTTGATATTAATTCGAATGTGGGGGGTGCGTGTGGGGAGATT
GTGGCTTTGAAGGGGAAGTGGGGGTTGAATTTGGTGAATCCGTTGGTGGCGGCGCAGAATTTTGAGTATAAGATG
TCGAATATTTTGGATAAGCCTTTGGAATCGGTGTTTGGGTATATTACGGTCTTGCCGGGTGCGTTTAGCGCGTAT
AGGTATATTGCGTTGCAGAATGATAGTGTGGGAGAAGGACCACTACAAAAATATTTTTTGGGTGAAAAAATGCAT
GGTTCGGGAGCGGACATTTTTACTGCGAATATGTATCTTGCTGAAGATCGTATTTTGTGTTGGGAATTGGTTTCG
AAACGAGGGGGGTCGTGGATTCTTCATTATGTTAAATCTGCTTATGCAGTAACAGACGTACCTGACCAAGTACCG
GAATTGATATCACAACGAAGACGGTGGTTGAATGGCTCGTTCTTTGCTGCCGTGCATAGTACAATCCACTTTTAT
TACATTTATAGGTCGTCGCATACTTTTTTGAGAAAGTTTTGGATTCATGTCGAGATGCTTTATCAGTTTTTCAAT
TTGATTTTTTCGTGGTTCGCTCTCGCAAATTATTATATAGCATTCAACATTTTATCAACGGCTATGACGGTCCTT
GTTGCAGGAGGTACAGATCCGAAATTGTTGACGGGGGCGGGACCAAAGGCGATGTCGATTTTTAATCATGTCTTT
AACTATTTTTATTTGGGGTTGTTGATTATGTGTTTTATTTTGGCGTTGGGGAATAGGCCGCAGGGGAGTAAGTGG
GGGTATACGTTGGCGATTTTGGGGTTTGCGTTGATTACGGTTTATATGACGGCTTCGGCGTTGGTGTTGGCGGTG
AAGGGGATACAGAATGTGGAGAGTGCGGAGGGACCTTTGTCGGTGGAGGATGTGTTTACGAATACGATATTTAGG
AATATCGTGCTTTCGTTGTTGGCGACTTTGGGGTTGTATCTTCTTGCTTCTTTGATCTTTTTTGAGCCGTGGCAT
ATGATTACATCGTTTTTGCAATATGTGCTTATGGCACCTTCGTATATATCCGTACTCAACGTCTACGCCTTTGCA
AACGTACATGACGTATCATGGGGAACGAAAGGCGATAACAAAGTCAACACTGATTTAGGTGTTGTCAAAACGTCT
GAAGACGGTAAATCGACGGAAGTGGAAATTAATGTGCCGACGAATGAGAAGGATATTAATTTGTTGTATGAGGAG
GCATTACATGTGTTGAATCATGCTCCACCGAAAGTGGAGAGTAAACCGGATGCGGGGACGGTTCAGGAAGATTAT
TATAGGAGTTTTAGAACAAATGTGTTGTTGGCGTGGACGTTGAGTAATGCGTTGTTGGCGGCGGTGATTACGGCG
ACGAATGATGTGAGTTCGGCGAATAAAGCTGTGAATGGGTATATGGCGTTTTTGTTGTATTCGGTTGCGGGACTT
GCTTTGGTGAGGTTTGTGGGTTCGGCGACGTATATGGTTGTTAGGTTGTTTGCGGGAGAGTAA
Gene >AgabiH97|097540
ATGTCCAACTATAACCAGGTGCGTGGTTGTTCGTTTCCCGTGAACACAAAGTGATAGTAATGATTTAGGCCGACG
AGGCCCAGCACCACCACTACAACGACGGCTATGCGCCCTACCCGTCGCCCTACGATCAATACCAAGCCCCCATCC
CAAATCCATTCGCAAGTCCACCCGGCCCGCCCCATACTGTCCCACCTCCTACTGCTTTCTCTCCACCACCACCAC
CACCACCCTCCCACTATGCTAATCCTTTTGACGGGCAGGGTTACCCCGTCACATCGCCTCCTCCCGTCATTCTTT
CCTCTTCCCCTCCTCATCTTCCACAACACACTTCTCCTCCACCACCACCACCCCAACCCTCCATGCTCTCCGGCC
CTTTCCAAGCTCCAGGTCCCCCGCCCCTCAATCCATCCTCAAATTCTTTACACTCCAAACCATCACATGGATATT
CTCGGTATGACATGCATGACGATACCGCTGGTATAGAGGATCACGAGATGCCACTTTTACGACGAGATGCTTCGC
ATGGGACTACATATCTGAATATGCCTGGAGGGGATTACGATAATGAGAATGGTAATGAGGAGGAAGAACCGGAGG
CGAGGATTAGATATGGGCGTTTACCGCAACGTGTGCCTAGACGCTACAAGACGATTAAACGCGTAGAGTGAGTGA
TTTGCTCAGGCGCTGAACAAAAAAATACTGATTATATGTTCTGTATAGGTTATTTCAAGGAAACTTTGTCCTCGA
CAACCCTGTTCCCTCGAAACTTCTAGAAATGTGTCCTAACAAATCCGAACGCGAATTCACTCACATGCGCTACTC
AGCCGCCACATGCGATCCCAACTCTTTCAAAGACGAAGGCTTCACTCTTCGTCAAGTCTTACACGACCCTCCTCG
TCGTACAGAACTCTTCATCGTCATGACCATGTATAATGAAGAAGAAGATTTATTTTGTCGTACTTTTCATGGTGT
CGTTAAGAATATTGCTCATTTGTGTAAGAGGGATAGAAGTAAGACGTGGGGGAAGGATGGATGGAAGAAGGTTGT
GGTCTGTATTGTGAGTGATGGGAGACAGAAGATTAATTCGAGGACTTTGAATGTCATTGCGGCTATGGGGGCTTA
TCAAGAGGGCGTGGCTAAGGTTTGTGGTTTCCTCCTTAGTGCGCTGAAGGTTGATTAATTTTTTTGAAAATAGAA
TAAAATTGATGATAGACCTGTTACGGCGCATATTTACGAATATACCACCCAAGGCAAGTCATCCGTCATCTATTT
ACTCACTTTTTTTCACACATCTCTCATAGTCTCCGTCACTCCCTCCATGCGTATCGAAGGTGCCTCCAAAGGCGT
CGTCCCCGTCCAAGTCATCTTCTGCCTCAAAGAAAAAAACCAAAAAAAGATAAACTCCCATCGTTGGTTCTTCAA
CGCCTTTGGTCCCATCCTTCAACCCAACGTCTGTATTCTTCTCGATGTCGGTACGCAACCGGGTCCTACGAGTAT
ATATCATTTGTGGAAAGCGTTTGATATTAATTCGAATGTGGGGGGTGCGTGTGGGGAGATTGTGGCTTTGAAGGG
GAAGTGGGGGTTGAATTTGGTGAATCCGTTGGTGGCGGCGCAGAATTTTGAGTATAAGATGTCGAATATTTTGGA
TAAGCCTTTGTGAGTTGTTTTGCGCATATGATCCTTGCTTTTTTTAAAAAAACTCAATTTTCTGTTAAAAGGGAA
TCGGTGTTTGGGTATATTACGGTCTTGCCGGGTGCGTTTAGCGCGTATAGGTATATTGCGTTGCAGAATGATAGT
GTGGGAGAAGGACCACTACAAAAATATTTTTTGGGTGAAAAAATGGTGAGTTTGAGGAGATTTTAACGTCGTTCG
TTGCTGATGGGTGGCTTTTTTTTCTAGCATGGTTCGGGAGCGGACATTTTTACTGCGAATATGTATCTTGCTGAA
GATCGTGTAAGTTTTTTTTCATTTGTCATTTGGGTTTTACTGAGCGTTTCTTGAAGATTTTGTGTTGGGAATTGG
TTTCGAAACGAGGGGGGTCGTGGATTCTTCATTATGTTAAATCTGCTTATGCAGTAACAGACGTACCTGACCAAG
TAAGCTCTCAAAATTCAAAAAAAAAACCTTCGCAGTTTACGAATTCAAAATAGGTACCGGAATTGATATCACAAC
GAAGACGGTGGTTGAATGGCTCGTTCTTTGCTGCCGTGCATAGTACAATCCACTTTTATTACATTTATAGGTCGT
CGCATACTTTTTTGAGAAAGTTTTGGATTCATGTCGAGATGCTTTATCAGTTTTTCAATTTGATTTTTTCGTGGT
TCGCTCTCGTACGTCCTCTTCCTTCCTTCCACCCCTATTCTAACCCATAGTCAAAACTCACTTCACTTTTTATGA
AAGGCAAATTATTATATAGCATTCAACATTTTATCAACGGCTATGACGGTCCTTGTTGCAGGAGGTACAGATCCG
AAATTGTTGACGGGGGCGGGACCAAAGGCGATGTCGATTTTTAATCATGTCTTTAACTATTTTTATTTGGGGTTG
TTGATTATGTGTTTTATTTTGGCGTTGGGGAATAGGCCGCAGGGGAGTAAGTGGGGGTATACGTTGGCGATTTTG
GGGTTTGCGTTGATTACGGTTTATATGACGGTGAGTGACCATAGAGAGAGTGATTGATTGATTGGTGGTTTGATA
ACTAAGAATGGATTTTTTTTTTTGGTTAGGCTTCGGCGTTGGTGTTGGCGGTGAAGGGGATACAGAATGTGGAGA
GTGCGGAGGGACCTTTGTCGGTGGAGGATGTGTTTACGAATACGATATTTAGGAATATCGTGCTTTCGTTGTTGG
CGACTTTGGGGTTGTATCTTCTTGCTTCTTTGATCTTTGTGAGTTTTACTTCATCACTTGGCTTTGATTTTTCTC
TGATGCGCTTTTTTTAGTTTGAGCCGTGGCATATGATTACATCGTTTTTGCAATATGTGCTTATGGCACCTTCGT
ATATATCCGTACTCAACGTCTACGCCGTAAGTCCTAATCTCAACTTTTCCTCATCATCGTTTTCTAAACTTTTTT
TTTTTTTATTCGTAGTTTGCAAACGTACATGACGTATCATGGGGAACGAAAGGCGATAACAAAGTCAACACTGAT
TTAGGTGTTGTCAAAACGTCTGAAGACGGTAAATCGACGGAAGTGGAAATTAATGTGCCGACGAATGAGAAGGAT
ATTAATTTGTTGTATGAGGAGGCATTACATGTGTTGAATCATGCTCCACCGAAAGTGGAGAGTAAACCGGATGCG
GGGACGGTTCAGGAAGATTATTATAGGAGTTTTAGAACAAAGTGAGTTTTTTCTTTTCTACAAGGGAATAAATGA
TTGATTATTATGAATAGTGTGTTGTTGGCGTGGACGTTGAGTAATGCGTTGTTGGCGGCGGTGATTACGGCGACG
AATGATGTGAGTTCGGCGAATAAAGCTGTGAATGGGTATATGGCGTTTTTGTTGTATTCGGTTGCGGGACTTGCT
TGTGAGTTTTTTTTTTTGTCTTTCCTCGCTTTTTGGGATTTTTGATCACTGACTTTTGATATTATTTTTTTTTGA
AGTGGTGAGGTTTGTGGGTTCGGCGACGTATATGGTTGTTAGGTTGTTTGCGGGAGAGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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