© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|097530 |
| Gene name | |
| Location | scaffold_7:81075..83282 |
| Strand | - |
| Gene length (bp) | 2207 |
| Transcript length (bp) | 1578 |
| Coding sequence length (bp) | 1578 |
| Protein length (aa) | 526 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 7.8E-25 | 102 | 397 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P76628|YGAY_ECOLI | Putative uncharacterized transporter YgaY OS=Escherichia coli (strain K12) GN=ygaY PE=5 SV=2 | 102 | 447 | 2.0E-39 |
| sp|Q8X4V6|YGAY_ECO57 | Uncharacterized transporter YgaY OS=Escherichia coli O157:H7 GN=ygaY PE=3 SV=1 | 102 | 447 | 3.0E-39 |
| sp|P96675|YDER_BACSU | Uncharacterized MFS-type transporter YdeR OS=Bacillus subtilis (strain 168) GN=ydeR PE=3 SV=1 | 104 | 467 | 8.0E-39 |
| sp|Q9ADP8|Y4007_STRCO | Probable transporter SCO4007 OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=SCO4007 PE=2 SV=1 | 100 | 354 | 7.0E-33 |
| sp|P43531|YNFM_ECOLI | Inner membrane transport protein YnfM OS=Escherichia coli (strain K12) GN=ynfM PE=1 SV=2 | 103 | 474 | 9.0E-08 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P76628|YGAY_ECOLI | Putative uncharacterized transporter YgaY OS=Escherichia coli (strain K12) GN=ygaY PE=5 SV=2 | 102 | 447 | 2.0E-39 |
| sp|Q8X4V6|YGAY_ECO57 | Uncharacterized transporter YgaY OS=Escherichia coli O157:H7 GN=ygaY PE=3 SV=1 | 102 | 447 | 3.0E-39 |
| sp|P96675|YDER_BACSU | Uncharacterized MFS-type transporter YdeR OS=Bacillus subtilis (strain 168) GN=ydeR PE=3 SV=1 | 104 | 467 | 8.0E-39 |
| sp|Q9ADP8|Y4007_STRCO | Probable transporter SCO4007 OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=SCO4007 PE=2 SV=1 | 100 | 354 | 7.0E-33 |
| sp|P43531|YNFM_ECOLI | Inner membrane transport protein YnfM OS=Escherichia coli (strain K12) GN=ynfM PE=1 SV=2 | 103 | 474 | 9.0E-08 |
| sp|P45123|BCR_HAEIN | Bicyclomycin resistance protein homolog OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=bcr PE=3 SV=1 | 112 | 274 | 5.0E-07 |
| sp|Q8K902|Y567_BUCAP | Uncharacterized transporter BUsg_567 OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=BUsg_567 PE=3 SV=1 | 90 | 356 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 43 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 86 | 108 | 22 |
| 2 | 128 | 150 | 22 |
| 3 | 157 | 176 | 19 |
| 4 | 181 | 203 | 22 |
| 5 | 216 | 238 | 22 |
| 6 | 243 | 265 | 22 |
| 7 | 293 | 315 | 22 |
| 8 | 330 | 352 | 22 |
| 9 | 359 | 393 | 34 |
| 10 | 445 | 467 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|097530 MTNSSSLSEDSVRTKQHDPDLEKEAQEFKDDSDDVSPKSPSTIANDSPKSQEESLGHRSSETKLRTRDFGIFPIP EHLQHRLDRPFHFGLTLNIAFGVFSTFTVANLYYCQPLLVQIADSFGVTHAKVSNIPTLIQAGYAGGLLFITPLG DLVRRRSLILLTIILSLVFSIGLAVTQSVEAFEALSFIVGAVSVTPQILMPLVADLAPDNRRASAIAIVFSGLLF GILVARVLAGIIAEFVIWRVVYYFAIGVQALVLLGSYLLLPDYPSRNKNMTYWGILSTMAKFAVTEPVLIQSCII NLCSSACFASFWVTLTFLLDGPPYHYSTLVIGLFGLIGMAGVSLGPIGGRIIDKWQPWFISLFNICMLLVFQAIQ TAAGGINVAAVIIVTFGIDVFRQNLQVSLSTSIFMIDPAARSRLNAVSILSIFIGQVMGTSVGTRVFIKFGWRAC AALSLGWTGFMFLVLLLRGPHCPRYTWFGYEGGISVRKTISSSVPPNQDNTPQKQEQPQPIDRSLLLGSVGSYGL * |
| Coding | >AgabiH97|097530 ATGACGAACAGCAGTTCTCTTTCAGAGGACAGTGTTCGCACTAAACAACATGATCCGGATCTAGAGAAAGAGGCT CAGGAGTTCAAGGACGACTCTGACGACGTCTCCCCAAAATCACCCTCTACTATAGCCAATGATTCGCCAAAATCA CAGGAAGAGTCACTTGGCCACCGTTCCTCCGAAACCAAACTGCGTACTCGAGATTTCGGCATCTTTCCGATTCCG GAACATCTACAACACCGTCTTGACAGGCCTTTCCATTTTGGTTTGACATTGAATATCGCTTTTGGAGTATTCAGT ACTTTCACCGTCGCCAATTTGTATTATTGTCAGCCTCTTCTGGTTCAGATTGCCGACAGTTTTGGAGTGACACAT GCTAAAGTGTCAAATATCCCTACGCTTATCCAGGCAGGATACGCTGGAGGACTCTTGTTCATCACGCCCCTAGGT GATTTGGTTCGGCGAAGATCACTCATCCTCCTCACCATAATCCTCTCACTGGTATTCTCAATCGGTTTGGCCGTG ACCCAAAGCGTTGAAGCCTTCGAAGCTCTATCTTTCATCGTAGGAGCCGTATCCGTTACACCACAAATCCTCATG CCGCTAGTCGCTGACCTCGCTCCAGACAATCGCAGAGCGTCAGCCATTGCAATCGTTTTTTCCGGTTTACTCTTT GGGATCCTCGTCGCCCGTGTCCTAGCCGGAATCATCGCAGAATTTGTCATATGGCGTGTAGTTTATTACTTTGCT ATTGGAGTCCAAGCTCTAGTTTTGCTCGGATCTTATCTTTTGCTGCCGGATTACCCGTCAAGGAACAAAAATATG ACTTATTGGGGTATTTTATCCACTATGGCCAAGTTTGCAGTCACGGAACCTGTGTTGATTCAAAGTTGCATCATC AATTTATGCTCAAGCGCCTGTTTCGCGAGCTTTTGGGTAACCTTGACCTTCTTATTAGATGGTCCACCCTATCAT TATTCCACACTCGTAATTGGACTCTTCGGGTTGATCGGGATGGCTGGTGTATCATTGGGACCCATCGGCGGACGT ATCATCGATAAATGGCAACCTTGGTTCATATCTCTCTTTAATATCTGCATGCTCCTCGTTTTTCAAGCAATTCAA ACTGCGGCTGGTGGTATAAACGTTGCGGCTGTCATCATTGTGACTTTTGGAATCGATGTGTTCCGTCAAAATCTT CAAGTATCGCTCTCAACTTCTATCTTCATGATTGATCCTGCCGCACGTTCAAGATTGAATGCCGTCAGTATCCTA TCAATATTCATCGGACAGGTGATGGGAACATCCGTCGGCACTCGTGTTTTTATCAAATTCGGTTGGAGAGCCTGT GCAGCCCTAAGTTTAGGATGGACAGGATTCATGTTCCTCGTGCTCTTATTACGAGGACCGCATTGTCCGAGGTAC ACGTGGTTCGGATATGAGGGTGGAATCAGCGTTAGGAAAACAATTTCCTCTTCCGTACCGCCGAATCAAGATAAC ACGCCACAAAAGCAAGAGCAACCGCAGCCGATAGATAGATCATTGTTGCTTGGGTCTGTGGGTTCATATGGTTTA TGA |
| Transcript | >AgabiH97|097530 ATGACGAACAGCAGTTCTCTTTCAGAGGACAGTGTTCGCACTAAACAACATGATCCGGATCTAGAGAAAGAGGCT CAGGAGTTCAAGGACGACTCTGACGACGTCTCCCCAAAATCACCCTCTACTATAGCCAATGATTCGCCAAAATCA CAGGAAGAGTCACTTGGCCACCGTTCCTCCGAAACCAAACTGCGTACTCGAGATTTCGGCATCTTTCCGATTCCG GAACATCTACAACACCGTCTTGACAGGCCTTTCCATTTTGGTTTGACATTGAATATCGCTTTTGGAGTATTCAGT ACTTTCACCGTCGCCAATTTGTATTATTGTCAGCCTCTTCTGGTTCAGATTGCCGACAGTTTTGGAGTGACACAT GCTAAAGTGTCAAATATCCCTACGCTTATCCAGGCAGGATACGCTGGAGGACTCTTGTTCATCACGCCCCTAGGT GATTTGGTTCGGCGAAGATCACTCATCCTCCTCACCATAATCCTCTCACTGGTATTCTCAATCGGTTTGGCCGTG ACCCAAAGCGTTGAAGCCTTCGAAGCTCTATCTTTCATCGTAGGAGCCGTATCCGTTACACCACAAATCCTCATG CCGCTAGTCGCTGACCTCGCTCCAGACAATCGCAGAGCGTCAGCCATTGCAATCGTTTTTTCCGGTTTACTCTTT GGGATCCTCGTCGCCCGTGTCCTAGCCGGAATCATCGCAGAATTTGTCATATGGCGTGTAGTTTATTACTTTGCT ATTGGAGTCCAAGCTCTAGTTTTGCTCGGATCTTATCTTTTGCTGCCGGATTACCCGTCAAGGAACAAAAATATG ACTTATTGGGGTATTTTATCCACTATGGCCAAGTTTGCAGTCACGGAACCTGTGTTGATTCAAAGTTGCATCATC AATTTATGCTCAAGCGCCTGTTTCGCGAGCTTTTGGGTAACCTTGACCTTCTTATTAGATGGTCCACCCTATCAT TATTCCACACTCGTAATTGGACTCTTCGGGTTGATCGGGATGGCTGGTGTATCATTGGGACCCATCGGCGGACGT ATCATCGATAAATGGCAACCTTGGTTCATATCTCTCTTTAATATCTGCATGCTCCTCGTTTTTCAAGCAATTCAA ACTGCGGCTGGTGGTATAAACGTTGCGGCTGTCATCATTGTGACTTTTGGAATCGATGTGTTCCGTCAAAATCTT CAAGTATCGCTCTCAACTTCTATCTTCATGATTGATCCTGCCGCACGTTCAAGATTGAATGCCGTCAGTATCCTA TCAATATTCATCGGACAGGTGATGGGAACATCCGTCGGCACTCGTGTTTTTATCAAATTCGGTTGGAGAGCCTGT GCAGCCCTAAGTTTAGGATGGACAGGATTCATGTTCCTCGTGCTCTTATTACGAGGACCGCATTGTCCGAGGTAC ACGTGGTTCGGATATGAGGGTGGAATCAGCGTTAGGAAAACAATTTCCTCTTCCGTACCGCCGAATCAAGATAAC ACGCCACAAAAGCAAGAGCAACCGCAGCCGATAGATAGATCATTGTTGCTTGGGTCTGTGGGTTCATATGGTTTA TGA |
| Gene | >AgabiH97|097530 ATGACGAACAGCAGTTCTCTTTCAGAGGACAGTGTTCGCACTAAACAACATGATCCGGATCTAGAGAAAGAGGCT CAGGAGTTCAAGGACGACTCTGACGACGTCTCCCCAAAATCACCCTCTACTATAGCCAATGATTCGCCAAAATCA CAGGAAGAGTCACTTGGCCACCGTTCCTCCGAAACCAAACTGCGTACTCGAGATTTCGGCATCTTTCCGATTCCG GAACATCTACAACACCGTCTTGACAGGCCTTTCCATTTTGGTTTGACATTGAATATCGCTTTTGGAGTATTCAGT ACTTTCAGTATGTGCTTTGTTTTCCTACGGTTGCTTATCATTAATGAGGTCACTCATTTAGCCGTCGCCAATTTG TATTATTGTCAGCCTCTTCTGGGTAAGAGATTCAAATCTTCCAACAATCCGTGAAACTCCCAGCGCTTCTTACAC CCCTTGCAACAACAGTTCAGATTGCCGACAGTTTTGGAGTGACACATGCTAAAGTGTCAAAGTGCGTTTTCGCGA CTTTGCTTGCGAAAAACCAAAGGATGTGCTGAGACGACCCTATAGTATCCCTACGCTTATCCAGGCAGGGTAAGT GCAAACTTCATACTTCCAACCACAATACACCAAAACCATTCCACAGATACGCTGGAGGACTCTTGTTCATCACGC CCCTAGGTGATTTGGTTCGGCGAAGATCACTCATCCTCCTCACCATAATCCTCTCACTGGTATTCTCAATCGGTT TGGCCGTGACCCAAAGCGTTGAAGCCTTCGAAGCTCTATCTTTCATCGTAGGAGCCGTATCCGTTACACCACAAA TCCTCATGCCGCTAGTCGCTGACCTCGCTCCAGACAATCGCAGAGCGTCAGCCATTGCAATCGTTTTTTCCGGTT TACTCTTTGGGATCCTCGTCGCCCGTGTCCTAGCCGGAATCATCGCAGAATTTGTCATATGGCGTGTAGTTTATT ACTTTGCTATTGGAGTCCAAGCTCTAGTTTTGCTCGGATCTTATCTTTTGCTGCCGGATTACCCGTCAAGGAACA AAAATATGACTTATTGGGGTATTTTATCCACTATGGCCAAGTTTGCAGTCACGGAACCTGTGTTGATTCAAAGTT GCATCATCAATTTATGCTCAAGCGCCTGTTTCGCGAGCTTTTGGGTAACCTTGACCTTCTTATTAGATGGTCCAC CCTATCATTATTCCACGTGCGTTCTCAAAATATTCAATTTTCTCCCAATTCATCATAACAATAACAATTCACTCA TATGACGTCTTGAATCAGACTCGTAATTGGACTCTTCGGGTTGATCGGGATGGCTGGTGTATCATTGGGACCCAT CGGCGGACGTATCATCGATAAATGGCAACCTTGGTTCATATCTCTCTTTAATATCTGCATGCTCCTCGTTTTTCA AGCAATTCAAACTGCGGCTGGTGGTATAAACGTTGCGGCTGTCATCATTGTGACTTTTGGAATCGATGTGTTCCG TCAAAATCTTCAAGTATCGCTCTCAACTTCTATCTTCATGTAAGTCCATTTGTCCTCCTTTTACTGTATTGGATT TCATGAATTTTTTATGTGATTAGGATTGATCCTGCCGCACGTTCAAGATTGAATGCCGTCAGTATCCTATCAGTA CGTGCTCTTCCCTAATCCGTTTTCTTTTTTGTTTGAAGTATATATTATATATTGTTTCTAGATATTCATCGGACA GGTGATGGGAACATCCGTCGGCACTCGTGTTTTTATCAAATTCGGTTGGAGAGCCTGTGCAGCCCTAAGTTTAGG ATGGACAGGATTCATGTTCCTCGTGCTCTTATTACGAGGACCGCATTGTCCGAGGTACACGTGGTTCGGATATGA GGGTGGAATCAGCGTTAGGAAAACAATTTCCTCTTCCGTACCGCCGAATCAAGATAACACGCCACAAAAGCAAGA GCAACCGCAGGTTGTCTCGAGATAACCTATCGAGTGACTTTTAAAAGCGAGGAGGAGTTAGGTTAATAAAGGAGA ATGGACCTTTCTAGCCATGGACTCGGATGTAGTCAGGGTGTTTGAAACTGGTGATACTTGGAAAGACGCAGCCGA TAGATAGATCATTGTTGCTTGGGTCTGTGGGTTCATATGTACGTATTCGCTTACGTTATACGCACGATGAGAATC TTGTAATTATTAGGTTTATGCAGGGTTTATGA |