Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|097070
Gene name
Locationscaffold_6:2279575..2281054
Strand-
Gene length (bp)1479
Transcript length (bp)327
Coding sequence length (bp)327
Protein length (aa) 109

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 40 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|097070
MYSLKLFIAAALALAVQASATPPVITFLLSLLFLLHANAQPTTALEVDECHIDQVCSCCADVISPYHYSHRVSAR
IVHNTLMGLDAVMDSRSAIAATWNPIPHAKRVI*
Coding >AgabiH97|097070
ATGTATTCTCTCAAGCTCTTCATCGCCGCCGCCCTTGCCTTAGCTGTTCAGGCATCTGCCACTCCTCCAGTAATC
ACATTCCTCTTGTCCTTGTTGTTCTTACTTCACGCGAATGCACAACCAACCACAGCTCTTGAAGTAGACGAATGT
CATATCGATCAGGTATGTTCCTGCTGTGCGGACGTTATCTCGCCTTACCATTATTCGCACCGCGTCTCCGCTAGG
ATTGTGCACAACACTCTAATGGGCCTCGATGCTGTCATGGATTCGCGTTCAGCTATTGCAGCAACGTGGAACCCG
ATACCGCATGCTAAAAGAGTTATCTAG
Transcript >AgabiH97|097070
ATGTATTCTCTCAAGCTCTTCATCGCCGCCGCCCTTGCCTTAGCTGTTCAGGCATCTGCCACTCCTCCAGTAATC
ACATTCCTCTTGTCCTTGTTGTTCTTACTTCACGCGAATGCACAACCAACCACAGCTCTTGAAGTAGACGAATGT
CATATCGATCAGGTATGTTCCTGCTGTGCGGACGTTATCTCGCCTTACCATTATTCGCACCGCGTCTCCGCTAGG
ATTGTGCACAACACTCTAATGGGCCTCGATGCTGTCATGGATTCGCGTTCAGCTATTGCAGCAACGTGGAACCCG
ATACCGCATGCTAAAAGAGTTATCTAG
Gene >AgabiH97|097070
ATGTATTCTCTCAAGCTCTTCATCGCCGCCGCCCTTGCCTTAGCTGTTCAGGCATCTGCCACTCCTCCAGTAATC
ACATGTAAGCGCAAAGCTCCCTTAGATTTTGACTCATGAGAACTAATTACGACTCCAGGTGCTACTGTTCTTTGC
GCAGGGACATCTCCGTACTGTTGTGATGGTCCCAAAGGCCCTCGGTGAGTCAGACTCTTCATGTTGTTTAACTGT
TGTTCAATTTTATGAAAGCTGCGTAATTCTTGCTGAGGGACAAACATGCTCGAACGTTTATGATAATTACTGAGT
ATTCCATCATGTGATGGAAACGTTGTTCACTCAACTTCATGTAACTGTCGAATTACAATGCAATGAATGATCTCT
CAATCGTAATGCTCATGCTTCTATATATCAAGCTTTCTTAAAGCTAAATATCGTACTACTAAGCCTGTACCAACC
TTGGATGAGAGCGACCGCACATAAGAGGACATGATTAATATTATTATAGTCCATCTCAATGATGCGTTACAAAGA
TCTCTCTGACTCACAGGTCAGACAGCATAGGGACAGGGGACCCTACTCCGCCTCATGTTCTTGAATTCCACTTTA
GTATTTTGTTAGTATCTTGCTATCGCGGGTTTCTTTGATTATTAGGCCAACTACTAGGGCCGCCTGTTTACAGTA
TCGCGGATTGTATTTGAGCATCATGTTGCAAATGCAGATTTCAAAAAAGACAGTTGACTCGGCGTTTTAGCATTT
CCGAAAAAGACTAAGTTATGCTCAAAACCCAGAGTTATCCATGCTTCGCGGAATCTTTCATTCTCGGCGGCCATG
GACCTCACGTAGTAGTAAACGGCCTGTAGACTATTTTTATTCATAGTTGGCCAATAAGCCCGGAATACTCTGATC
TCCGCTGTTGAAAAATGCTAGGCAATTCCAAAGATCAGACATTTCTCCACGTACGGCACCACTGGGCGCCGCTTG
GCGCTAAGCTGTTTTAGAAAGTGGTCCATAAAAGAAGCCTCTCCACCGGCTGTTTTCTAACACACCCCACCATGC
TATCTAAACTCTTAGTCCTCTTGTCCTTGTTGTTCTTACTTCACGCGAATGCACAACCAACCACAGCTCTTGAAG
TAGACGAATGTCAGTTTTCATACATCCCTTTTGTATAATACACTGTTGTCTGATAATACGGTACCTCAGGTCATA
TCGATCAGGTATGTTCCTGCTGTGCGGACGTTATCTCGCCTTACCATTATTCGCACCGCGTCTCCGCTAGGATTG
TGCACAACGTAAGTGATAATCCTGGAACGTAGCCACTGAGACTCAAACCCGTTGTTTGTTCAGACTCTAATGGGC
CTCGATGCTGTCATGGATTCGCGTTCAGCTAGTAAGGATATAATTTTATGACAATTGAATTCACTGACGTTTTAA
TGTGCAGTTGCAGCAACGTGGAACCCGATACCGCATGCTAAAAGAGTTATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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