Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|096710
Gene name
Locationscaffold_6:2177227..2178072
Strand+
Gene length (bp)845
Transcript length (bp)666
Coding sequence length (bp)666
Protein length (aa) 222

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13489 Methyltransf_23 Methyltransferase domain 7.5E-09 42 207

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|096710
MTSTIANAPIQHQKSLPEATYLLPTTESERVRFDTQHQSITRAFGDKLVLSPVILTKGDKVLDSGAGSCSWLLHF
ATTLTLDIELYASDIETRFFPINPPKNVKLWEASSVDLPKDWSNAFQLVHQRLLISAFTSNDWPLAISELFRVTK
PGGWVELCEAGAEIDCPSHPNHRALTAARIAYEASDHVIQAAMLLPQWLKDAGFVKIQSVEGKYPIGKRLF*
Coding >AgabiH97|096710
ATGACATCGACCATCGCCAACGCACCGATACAACACCAGAAGTCATTGCCTGAAGCAACGTACCTCCTTCCCACA
ACTGAGTCGGAGCGCGTCAGGTTTGATACCCAGCATCAGAGCATAACGCGTGCTTTCGGTGACAAACTTGTCCTA
TCTCCAGTGATCCTCACAAAAGGCGACAAAGTGCTCGACTCCGGGGCAGGATCCTGCAGCTGGCTTCTTCATTTT
GCGACGACCTTGACGCTAGACATCGAACTTTACGCTTCGGATATCGAGACTCGATTCTTTCCCATCAATCCTCCA
AAGAACGTCAAACTATGGGAGGCATCCTCAGTGGACCTTCCTAAAGATTGGTCTAATGCATTCCAATTGGTCCAT
CAACGACTTCTCATTAGTGCGTTCACATCAAATGATTGGCCTTTAGCAATAAGCGAGCTCTTTCGCGTCACAAAG
CCTGGCGGCTGGGTAGAACTCTGTGAAGCAGGTGCAGAAATTGATTGTCCCTCGCATCCAAACCACAGGGCGCTC
ACAGCTGCGCGAATCGCATACGAAGCAAGTGACCACGTTATTCAAGCCGCCATGTTGTTGCCTCAATGGTTGAAA
GACGCTGGTTTCGTTAAAATCCAATCCGTGGAGGGAAAGTACCCCATAGGAAAGCGCCTATTTTGA
Transcript >AgabiH97|096710
ATGACATCGACCATCGCCAACGCACCGATACAACACCAGAAGTCATTGCCTGAAGCAACGTACCTCCTTCCCACA
ACTGAGTCGGAGCGCGTCAGGTTTGATACCCAGCATCAGAGCATAACGCGTGCTTTCGGTGACAAACTTGTCCTA
TCTCCAGTGATCCTCACAAAAGGCGACAAAGTGCTCGACTCCGGGGCAGGATCCTGCAGCTGGCTTCTTCATTTT
GCGACGACCTTGACGCTAGACATCGAACTTTACGCTTCGGATATCGAGACTCGATTCTTTCCCATCAATCCTCCA
AAGAACGTCAAACTATGGGAGGCATCCTCAGTGGACCTTCCTAAAGATTGGTCTAATGCATTCCAATTGGTCCAT
CAACGACTTCTCATTAGTGCGTTCACATCAAATGATTGGCCTTTAGCAATAAGCGAGCTCTTTCGCGTCACAAAG
CCTGGCGGCTGGGTAGAACTCTGTGAAGCAGGTGCAGAAATTGATTGTCCCTCGCATCCAAACCACAGGGCGCTC
ACAGCTGCGCGAATCGCATACGAAGCAAGTGACCACGTTATTCAAGCCGCCATGTTGTTGCCTCAATGGTTGAAA
GACGCTGGTTTCGTTAAAATCCAATCCGTGGAGGGAAAGTACCCCATAGGAAAGCGCCTATTTTGA
Gene >AgabiH97|096710
ATGACATCGACCATCGCCAACGCACCGATACAACACCAGAAGTCATTGCCTGAAGCAACGTACCTCCTTCCCACA
ACTGAGTCGGAGCGCGTCAGGTGGGTGGTGAGACATATAGCTCAGCAGCCTGTGCTGAAAATCCTCCACTGCGCC
GGTAGGTTTGATACCCAGCATCAGAGCATAACGCGTGCTTTCGGTGACAAACTTGTCCTATCTCCAGTGATCCTC
ACAAAAGGCGACAAAGTGCTCGACTCCGGGGCAGGATCCTGTATGTGTGACAACCATTCAAACCGACCTATCTTT
TTGACCAATTCGCGATGCAGGCAGCTGGCTTCTTCATTTTGCGACGACCTTGACGCTAGACATCGAACTTTACGC
TTCGGATATCGAGACTCGATTCTTTCCCATCAATCCTCCAAAGAACGTCAAACTATGGGAGGCATCCTCAGTGGA
CCTTCCTAAAGATTGGTCTAATGCATTCCAATTGGTCCATCAACGACTTCTCATTAGTGCGTTCACATCAAATGA
TTGGCCTTTAGCAATAAGCGAGCTCTTTCGCGTCACAAAGCCTGGCGGCTGGGTAGAACTCTGTGAAGCAGGTGC
AGAAATTGATTGTCCCTCGCATCCAAACCACAGGGCGCTCACAGCTGCGCGAATCGCATACGAAGCAAGTGACCA
CGTTATTCAAGCCGCCATGTTGTTGCCTCAATGGTTGAAAGACGCTGGTTTCGTTAAAATCCAATCCGTGGAGGG
AAAGTACCCCATAGGAAAGTGGGCCGGATCTGACGGAGAACATGCTCGTCATGGACTAATTGGATTTTTGAGGGC
CCTCAAGGCGCCTATTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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