© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | AgabiH97|096430 |
| Gene name | |
| Location | scaffold_6:2080053..2082757 |
| Strand | + |
| Gene length (bp) | 2704 |
| Transcript length (bp) | 1809 |
| Coding sequence length (bp) | 1809 |
| Protein length (aa) | 603 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 8.8E-17 | 34 | 192 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.3E-05 | 32 | 140 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 4 | 439 | 6.0E-40 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 16 | 464 | 7.0E-37 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 16 | 441 | 3.0E-32 |
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 20 | 228 | 6.0E-22 |
| sp|Q5HHX4|NORA_STAAC | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain COL) GN=norA PE=3 SV=1 | 46 | 192 | 2.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 4 | 439 | 6.0E-40 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 16 | 464 | 7.0E-37 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 16 | 441 | 3.0E-32 |
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 20 | 228 | 6.0E-22 |
| sp|Q5HHX4|NORA_STAAC | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain COL) GN=norA PE=3 SV=1 | 46 | 192 | 2.0E-09 |
| sp|P0A0J4|NORA_STAAM | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=norA PE=3 SV=1 | 46 | 192 | 3.0E-09 |
| sp|P0A0J5|NORA_STAAN | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain N315) GN=norA PE=3 SV=1 | 46 | 192 | 3.0E-09 |
| sp|P0A0J7|NORA_STAAU | Quinolone resistance protein NorA OS=Staphylococcus aureus GN=norA PE=3 SV=1 | 46 | 192 | 3.0E-09 |
| sp|P0A0J6|NORA_STAAW | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MW2) GN=norA PE=3 SV=1 | 46 | 192 | 3.0E-09 |
| sp|Q6GBD5|NORA_STAAS | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MSSA476) GN=norA PE=3 SV=1 | 46 | 192 | 3.0E-09 |
| sp|Q6GIU7|NORA_STAAR | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MRSA252) GN=norA PE=3 SV=1 | 46 | 192 | 4.0E-09 |
| sp|P02980|TCR2_ECOLX | Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 | 32 | 368 | 8.0E-09 |
| sp|B4EYY4|MDTG_PROMH | Multidrug resistance protein MdtG OS=Proteus mirabilis (strain HI4320) GN=mdtG PE=3 SV=1 | 45 | 183 | 5.0E-08 |
| sp|D8MQN9|MDTG_ERWBE | Multidrug resistance protein MdtG OS=Erwinia billingiae (strain Eb661) GN=mdtG PE=3 SV=1 | 45 | 198 | 9.0E-08 |
| sp|A8GCZ5|MDTG_SERP5 | Multidrug resistance protein MdtG OS=Serratia proteamaculans (strain 568) GN=mdtG PE=3 SV=1 | 46 | 183 | 5.0E-07 |
| sp|P51563|TCR7_VIBAN | Tetracycline resistance protein, class G OS=Vibrio anguillarum GN=tetA PE=3 SV=1 | 31 | 386 | 7.0E-07 |
| sp|Q0P5M9|MFS10_BOVIN | Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1 | 71 | 189 | 5.0E-06 |
| sp|P51564|TCR8_PASMD | Tetracycline resistance protein, class H OS=Pasteurella multocida GN=tetA PE=3 SV=1 | 46 | 458 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 68 | 90 | 22 |
| 2 | 105 | 127 | 22 |
| 3 | 160 | 182 | 22 |
| 4 | 202 | 224 | 22 |
| 5 | 269 | 291 | 22 |
| 6 | 315 | 334 | 19 |
| 7 | 346 | 368 | 22 |
| 8 | 383 | 405 | 22 |
| 9 | 412 | 434 | 22 |
| 10 | 449 | 471 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|096430 MTSIQPTDEATPLLQDQPPRQKTPLPWFQFSLVILLQLGESMTSQVISPFAPQLIRDLGITGGDETKVGYYVGTM HSLFFFTQAWTVLYWSQLSDRVGRKPTILIGLFGLSLSMFCFGLSTTFLGVVISRASNGAVNGNIAVIKSMMAEL TDSTNIAQAYAYTPLAWASGGTLGPFIGGALSHPAERFPSVFGHSSFLKKHPYFLPCAVPATYSACAWLIAYLYL KETVQQPMTFRELVFKSARKNRPNQSTETVLSETIDKPLPLKSLLVFRVIIAASNYAFLALVDISFRAIQPLFLS TPIELGGLGLPPSTIGDILSFFGVLNGVVQVFFFARIHDRWGSKRIFMTGIAACIPLFLLFPVINYLASKQGLRP IVWAVVFTQVTLSMLPSFAYSAIFIFIAAASPNKASVGATNGLCQVVVSVTRGIGPGVANSLFSLSMAHNWFGGY LVYYILVLVVGVALFMRGSFSSPYSKWDLHQTSCPLLFVVSEKFINPQGKPRLMKERPSRYVAGRRGKLKLMTEM PIDTLHEVFRQLNFFDLLHLSWASKRLRVLIMERSARYILWQENHIRHSNGSTNRRLHRRQIVVMPLPRSCYSSS LT* |
| Coding | >AgabiH97|096430 ATGACGAGTATTCAACCAACAGATGAAGCAACACCTTTATTACAGGACCAGCCACCTCGGCAAAAGACGCCCTTA CCATGGTTCCAATTTTCCCTTGTAATCCTTTTGCAGCTCGGAGAATCAATGACCTCCCAAGTCATATCTCCGTTC GCTCCACAGCTCATTCGAGATCTTGGAATTACTGGTGGAGATGAAACTAAGGTTGGATACTACGTTGGAACAATG CATTCTCTATTCTTCTTTACCCAAGCATGGACGGTCCTATACTGGAGTCAACTTTCTGACAGAGTCGGCCGTAAA CCAACCATACTAATAGGCTTATTCGGCCTCTCCTTATCGATGTTTTGCTTCGGCTTGTCAACCACTTTTCTTGGA GTAGTGATCAGCCGAGCCTCCAATGGAGCAGTCAATGGGAACATTGCGGTCATTAAAAGCATGATGGCAGAACTT ACAGATTCGACGAACATTGCCCAGGCGTACGCCTACACCCCACTTGCCTGGGCCTCTGGCGGAACTTTGGGTCCT TTTATTGGAGGGGCATTATCGCATCCTGCGGAACGATTCCCCTCTGTATTCGGCCACAGTTCCTTCCTAAAGAAG CACCCTTATTTCCTTCCTTGTGCTGTCCCGGCAACATACTCTGCTTGTGCTTGGCTTATCGCTTACCTATATTTG AAAGAGACAGTCCAGCAACCAATGACATTCAGAGAACTCGTTTTCAAATCAGCGAGAAAAAATCGGCCCAACCAA AGTACCGAGACAGTTCTGAGCGAAACCATAGACAAACCTCTCCCTTTGAAATCATTATTGGTATTTCGAGTTATC ATCGCTGCGTCCAACTACGCTTTCTTGGCTCTGGTGGATATTTCTTTTAGAGCGATTCAACCTCTTTTCCTGTCA ACGCCCATCGAACTGGGTGGACTTGGCCTTCCTCCATCTACCATTGGAGATATCTTGTCGTTCTTTGGGGTCCTT AATGGAGTCGTTCAGGTATTTTTCTTTGCTAGAATACACGACCGTTGGGGCTCGAAGAGGATTTTCATGACGGGC ATCGCTGCTTGTATCCCTTTGTTCCTCCTCTTCCCGGTCATCAACTATCTGGCTAGTAAACAAGGACTGAGGCCT ATCGTCTGGGCCGTCGTGTTTACTCAAGTTACATTGTCGATGCTTCCGAGCTTTGCATACAGTGCCATTTTCATC TTCATTGCTGCTGCTTCCCCGAATAAAGCATCCGTTGGTGCCACGAATGGATTGTGTCAGGTGGTTGTCAGTGTG ACCCGGGGTATTGGACCTGGGGTAGCAAATTCATTGTTTTCGCTATCGATGGCGCATAATTGGTTTGGAGGATAT CTTGTTTATTATATACTCGTGTTGGTTGTTGGTGTTGCGCTGTTTATGAGGGGATCATTTTCTTCTCCCTATAGC AAATGGGATTTACATCAGACGTCATGTCCACTCCTCTTCGTCGTTTCGGAAAAGTTCATTAATCCTCAGGGGAAG CCAAGATTGATGAAAGAACGACCGAGCAGATATGTTGCAGGCCGACGCGGAAAACTCAAGCTTATGACCGAAATG CCTATCGATACGCTACACGAGGTATTTCGACAACTCAATTTTTTTGATCTGTTACATCTGTCTTGGGCGAGTAAG AGGTTACGCGTCCTCATTATGGAGAGGTCCGCCCGGTATATATTATGGCAAGAAAATCATATTAGGCATTCGAAC GGCTCTACCAATCGTCGCCTTCATCGTCGTCAAATCGTTGTAATGCCCTTGCCCCGATCGTGTTATAGCTCCTCA CTAACGTAA |
| Transcript | >AgabiH97|096430 ATGACGAGTATTCAACCAACAGATGAAGCAACACCTTTATTACAGGACCAGCCACCTCGGCAAAAGACGCCCTTA CCATGGTTCCAATTTTCCCTTGTAATCCTTTTGCAGCTCGGAGAATCAATGACCTCCCAAGTCATATCTCCGTTC GCTCCACAGCTCATTCGAGATCTTGGAATTACTGGTGGAGATGAAACTAAGGTTGGATACTACGTTGGAACAATG CATTCTCTATTCTTCTTTACCCAAGCATGGACGGTCCTATACTGGAGTCAACTTTCTGACAGAGTCGGCCGTAAA CCAACCATACTAATAGGCTTATTCGGCCTCTCCTTATCGATGTTTTGCTTCGGCTTGTCAACCACTTTTCTTGGA GTAGTGATCAGCCGAGCCTCCAATGGAGCAGTCAATGGGAACATTGCGGTCATTAAAAGCATGATGGCAGAACTT ACAGATTCGACGAACATTGCCCAGGCGTACGCCTACACCCCACTTGCCTGGGCCTCTGGCGGAACTTTGGGTCCT TTTATTGGAGGGGCATTATCGCATCCTGCGGAACGATTCCCCTCTGTATTCGGCCACAGTTCCTTCCTAAAGAAG CACCCTTATTTCCTTCCTTGTGCTGTCCCGGCAACATACTCTGCTTGTGCTTGGCTTATCGCTTACCTATATTTG AAAGAGACAGTCCAGCAACCAATGACATTCAGAGAACTCGTTTTCAAATCAGCGAGAAAAAATCGGCCCAACCAA AGTACCGAGACAGTTCTGAGCGAAACCATAGACAAACCTCTCCCTTTGAAATCATTATTGGTATTTCGAGTTATC ATCGCTGCGTCCAACTACGCTTTCTTGGCTCTGGTGGATATTTCTTTTAGAGCGATTCAACCTCTTTTCCTGTCA ACGCCCATCGAACTGGGTGGACTTGGCCTTCCTCCATCTACCATTGGAGATATCTTGTCGTTCTTTGGGGTCCTT AATGGAGTCGTTCAGGTATTTTTCTTTGCTAGAATACACGACCGTTGGGGCTCGAAGAGGATTTTCATGACGGGC ATCGCTGCTTGTATCCCTTTGTTCCTCCTCTTCCCGGTCATCAACTATCTGGCTAGTAAACAAGGACTGAGGCCT ATCGTCTGGGCCGTCGTGTTTACTCAAGTTACATTGTCGATGCTTCCGAGCTTTGCATACAGTGCCATTTTCATC TTCATTGCTGCTGCTTCCCCGAATAAAGCATCCGTTGGTGCCACGAATGGATTGTGTCAGGTGGTTGTCAGTGTG ACCCGGGGTATTGGACCTGGGGTAGCAAATTCATTGTTTTCGCTATCGATGGCGCATAATTGGTTTGGAGGATAT CTTGTTTATTATATACTCGTGTTGGTTGTTGGTGTTGCGCTGTTTATGAGGGGATCATTTTCTTCTCCCTATAGC AAATGGGATTTACATCAGACGTCATGTCCACTCCTCTTCGTCGTTTCGGAAAAGTTCATTAATCCTCAGGGGAAG CCAAGATTGATGAAAGAACGACCGAGCAGATATGTTGCAGGCCGACGCGGAAAACTCAAGCTTATGACCGAAATG CCTATCGATACGCTACACGAGGTATTTCGACAACTCAATTTTTTTGATCTGTTACATCTGTCTTGGGCGAGTAAG AGGTTACGCGTCCTCATTATGGAGAGGTCCGCCCGGTATATATTATGGCAAGAAAATCATATTAGGCATTCGAAC GGCTCTACCAATCGTCGCCTTCATCGTCGTCAAATCGTTGTAATGCCCTTGCCCCGATCGTGTTATAGCTCCTCA CTAACGTAA |
| Gene | >AgabiH97|096430 ATGACGAGTATTCAACCAACAGATGAAGCAACACCTTTATTACAGGACCAGCCACCTCGGCAAAAGACGCCCTTA CCATGGTTCCAATTTTCCCTTGTAATCCTTTTGCAGCTCGGAGAATCAATGACCTCCCAAGTCATATCTCCGTTC GCTCCACAGGTGAGCAGAATCGTGGTTTGGTTGAATAACAATTGACCCATATGACATCCAGCTCATTCGAGATCT TGGAATTACTGGTGGAGATGAAACTAAGGTTGGATACTACGTTGGAACAATGGTGAGCTAAGTTTCTTACCTGTA AGGTCAACCGTTAACCTGAGTACTCGGTGATTAGCATTCTCTATTCTTCTTTACCCAAGCATGGACGGTCCTATA CTGGAGTCAACTTTCTGACAGAGTCGGCCGTAAACCAACCATACTAATAGGCTTATTCGGCCTCTCCTTATCGAT GTTTTGCTTCGGCTTGTCAACCACTTTTCTTGGAGTAGTGATCAGGTAATCTTCCAAACCGTATCCATCAGAGAG GTACATATTTTATATTCTCTTATTAGCCGAGCCTCCAATGGAGCAGTCAGTACGTGTGTCTCGTACTGATCATTG TAATTGCTCATTTCACCAATAATCATCTTCTCGACCAACTTACAGATGGGAACATTGCGGTCATTAAAAGGTTGG TGCTTTTGGTGTCGCGATGGAAATGGAAACTCAGAATAGTTCCCCTTAGCATGATGGCAGAACTTACAGATTCGA CGAACATTGCCCAGGTAAGTAATGCCGTCTGTACCGAAAATTTGACCTCAAAAGCTGTTCCAGGCGTACGCCTAC ACCCCACTTGCCTGGGCCTCTGGCGGAACTGTAAGTAGTGGTCCTACTCTTGATTCTGTGACTTAATATGATTGT TAGTTGGGTCCTTTTATTGGAGGGGCATTATCGCATCCTGCGGAACGATTCCCCTCTGTATTCGGCCACAGTTCC TTCCTAAAGAAGCACCCTTATTTCCTTCCTTGTGCTGTCCCGGCAACATACTCTGCTTGTGCTTGGCTTATCGCT TACCTATATTTGAAAGAGACAGTCCAGCAACCAATGACATTCAGAGAACTCGTTTTCAAATCAGCGAGAAAAAAT CGGCCCAACCAAAGTACCGAGACAGTTCTGAGCGAAACCATAGACAAACCTCTCCCTTTGAAATCATTATTGGTA TTTCGAGTTATCATCGCTGCGTCCAACTACGCTTTCTTGGCTCTGGTGGATATTTCTTTTAGAGCGATTCAACCT CTTTTCCTGTCAACGCCCATCGAACTGGGTGGACTTGGCCTTCCTCCATCTACCATTGGAGATATCTTGTCGTTC TTTGGGGTCCTTAATGGAGTCGTTCAGGTATTTTTCTTTGCTAGAATACACGACCGTTGGGGCTCGAAGAGGATT TTCATGACGGGCATCGCTGCTTGTATCCCTTTGTTCCTCCTCTTCCCGGTCATCAACTATCTGGCTAGTAAACAA GGACTGAGGCCTATCGTCTGGGCCGTCGTGTTTACTCAAGTTACATTGTCGATGCTTCCGAGCTTTGCATACAGT GCGTGTCCTATCGCTGATGATACGACTTTATTCCGGAGTCGAATTAAAACATAAATCCAGGTGCCATTTTCATCT TCATTGCTGCTGCTTCCCCGAATAAAGCATCCGTTGGTGCCACGAATGGATTGTGTCAGGTTCGTTCGTTGCCTT GATTTCTCGAAATACCAAAAGCTACTTACAAATTGATTTATGTTATGTGTTTTGTACAGGTGGTTGTCAGTGTGA CCCGGGGTATTGGACCTGGGGTAGCAAATTCATTGTTTTCGCTATCGATGGCGCATAATTGGTTTGGAGGATATC TTGTTTATTATATACTCGTGTTGGTTGTTGGTGTTGCGCTGTTTGTAGGGTCAATTTTGCCGAGTTCGCTGTAAA TTCTGTAATATGACTTGTTTAGATGAGGGGATCATTTTCTTCTCCCTATAGTAAGTAGACAGCTGCACCTATAGG GCACTTCATTGTACACGCTGATGATCCTGTACAGGCAAATGGGATTTACATCAGACGGTGTTGTCATACTTTACC ACGCCCTGTCCTTGAAAGCTTGAACTGCGGCAGTCATGTCCACTCCTCTTCGTCGTTTCGGAAAAGTTCATTAAT CCTCAGGGGAAGCCAAGGTAACAACCACAGCTACGTGTGACAACACCCATGTCAAGGCTCAGATAGATTGATGAA AGAACGGTGCCTAGTGAAGATGCGGACGCAGTATAAGTTCACGTTGGAAGATCGGATAGACCGAGCAGATATGTT GCAGGCCGACGCGGAAAACTCAAGCTTATGACCGAAATGCCTATCGATACGCTACACGAGGTATTTCGACAACTC AATTTTTTTGATCTGTTACATCTGTCTTGGGCGAGTAAGAGGTTACGCGTCCTCATTATGGAGAGGTCCGCCCGG TATATATTATGGCAAGAAGTGAGTGTACTATCGCATCGCATCGTCATGACATTCTTGTTATCGTCCGTTAGAATC ATATTAGGCATTCGAACGGCTCTACCAATCGTCGCCTTCATCGTCGTCAAATCGTTGTAATGCCCTTGCCCCGAT CGTGGTGAGAACAAGCAGGCCTACGTATAAATACACTCGTCTAATTTACTCCACAAGTTATAGCTCCTCACTAAC GTAA |