Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|096370
Gene name
Location	scaffold_6:2070877..2071916
Strand	+
Gene length (bp)	1039
Transcript length (bp)	912
Coding sequence length (bp)	912
Protein length (aa)	304

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13489	Methyltransf_23	Methyltransferase domain	1.2E-12	45	221
PF13649	Methyltransf_25	Methyltransferase domain	3.4E-09	70	164
PF08241	Methyltransf_11	Methyltransferase domain	6.1E-06	71	166

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O66128\|MENG_MICLU	Demethylmenaquinone methyltransferase OS=Micrococcus luteus GN=menG PE=3 SV=1	56	170	5.0E-06

GO

GO Term	Description	Terminal node
GO:0008168	methyltransferase activity	Yes
GO:0003674	molecular_function	No
GO:0016741	transferase activity, transferring one-carbon groups	No
GO:0016740	transferase activity	No
GO:0003824	catalytic activity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 46	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|096370 MSRSSSPVFTQRNEGDSGRFYISEVSEFSYYLPSDETERERLNLQSQLFYELFDNRYILPPITFKKGDIILDSGA GSGHWLSSVAKHVPETVQLRGIDISSRIFPPPSLTPPNVTFKTGSITSLPNEWNNYISFIHQRLLIGSLQEQHWK KSLSEMYRVLVPGGWVQLQEPYWTLTSPSQMIRDHTAYALKNELCRKRVAVWDIVKHLGSWLEQAGFVNVELVEK IRLPLGSWGGERGRIGLENILELFRGFRKPIMDEDGLGLVNDEEAFDAMLDDLKAQCEATPGTYYEYSVFIGQKP YSS*
Coding	>AgabiH97\|096370 ATGTCACGGTCATCCTCGCCGGTTTTTACCCAACGAAATGAAGGAGATTCTGGACGATTCTATATTTCTGAAGTT TCAGAATTCTCGTACTATCTTCCTTCTGATGAAACAGAACGAGAACGATTGAATCTTCAAAGTCAGTTATTTTAT GAGCTTTTCGACAATAGGTACATCTTGCCTCCGATAACTTTCAAGAAGGGAGACATCATCCTTGACAGCGGGGCA GGCTCAGGTCACTGGCTATCTTCTGTAGCAAAACATGTTCCAGAGACTGTCCAACTTCGAGGAATAGATATTTCA TCACGTATCTTTCCCCCACCATCTTTAACACCACCCAATGTCACCTTCAAAACCGGGTCTATCACGTCTCTCCCA AACGAATGGAATAATTACATATCATTCATACACCAGCGCCTTCTCATCGGATCCCTCCAAGAGCAACACTGGAAA AAAAGTTTATCCGAGATGTACCGTGTCCTCGTCCCAGGAGGGTGGGTACAACTCCAAGAACCATACTGGACACTC ACTTCCCCGTCACAAATGATACGAGACCATACGGCGTATGCATTGAAGAACGAACTGTGTCGAAAACGCGTAGCG GTTTGGGATATAGTCAAACATCTTGGGAGTTGGCTGGAACAAGCTGGGTTCGTGAATGTTGAGTTAGTAGAGAAA ATACGGCTACCTCTGGGTTCTTGGGGAGGCGAAAGAGGAAGAATCGGTTTGGAGAATATTTTAGAGTTGTTTCGT GGCTTCAGAAAACCCATTATGGATGAAGATGGTTTGGGTTTGGTGAACGATGAAGAGGCATTTGATGCTATGCTG GATGATCTCAAGGCCCAATGCGAAGCCACGCCAGGTACTTACTACGAGTACTCGGTATTTATTGGGCAAAAGCCT TATTCTTCTTAG
Transcript	>AgabiH97\|096370 ATGTCACGGTCATCCTCGCCGGTTTTTACCCAACGAAATGAAGGAGATTCTGGACGATTCTATATTTCTGAAGTT TCAGAATTCTCGTACTATCTTCCTTCTGATGAAACAGAACGAGAACGATTGAATCTTCAAAGTCAGTTATTTTAT GAGCTTTTCGACAATAGGTACATCTTGCCTCCGATAACTTTCAAGAAGGGAGACATCATCCTTGACAGCGGGGCA GGCTCAGGTCACTGGCTATCTTCTGTAGCAAAACATGTTCCAGAGACTGTCCAACTTCGAGGAATAGATATTTCA TCACGTATCTTTCCCCCACCATCTTTAACACCACCCAATGTCACCTTCAAAACCGGGTCTATCACGTCTCTCCCA AACGAATGGAATAATTACATATCATTCATACACCAGCGCCTTCTCATCGGATCCCTCCAAGAGCAACACTGGAAA AAAAGTTTATCCGAGATGTACCGTGTCCTCGTCCCAGGAGGGTGGGTACAACTCCAAGAACCATACTGGACACTC ACTTCCCCGTCACAAATGATACGAGACCATACGGCGTATGCATTGAAGAACGAACTGTGTCGAAAACGCGTAGCG GTTTGGGATATAGTCAAACATCTTGGGAGTTGGCTGGAACAAGCTGGGTTCGTGAATGTTGAGTTAGTAGAGAAA ATACGGCTACCTCTGGGTTCTTGGGGAGGCGAAAGAGGAAGAATCGGTTTGGAGAATATTTTAGAGTTGTTTCGT GGCTTCAGAAAACCCATTATGGATGAAGATGGTTTGGGTTTGGTGAACGATGAAGAGGCATTTGATGCTATGCTG GATGATCTCAAGGCCCAATGCGAAGCCACGCCAGGTACTTACTACGAGTACTCGGTATTTATTGGGCAAAAGCCT TATTCTTCTTAG
Gene	>AgabiH97\|096370 ATGTCACGGTCATCCTCGCCGGTTTTTACCCAACGAAATGAAGGAGATTCTGGACGATTCTATATTTCTGAAGTT TCAGAATTCTCGTACTATCTTCCTTCTGATGAAACAGAACGAGAACGGTAAGGTTTTCGATCATCGCTGACTCTC AGTCAAAATAGGTTCGATCACACCCTCATTCGTTCTTACCAGATTGAATCTTCAAAGTCAGTTATTTTATGAGCT TTTCGACAATAGGTACATCTTGCCTCCGATAACTTTCAAGAAGGGAGACATCATCCTTGACAGCGGGGCAGGCTC AGGTAAGTGTTAGTTATCTGCCAGCGAAACCATCAATTCTGATGCATAGTATAACGAAGGTCACTGGCTATCTTC TGTAGCAAAACATGTTCCAGAGACTGTCCAACTTCGAGGAATAGATATTTCATCACGTATCTTTCCCCCACCATC TTTAACACCACCCAATGTCACCTTCAAAACCGGGTCTATCACGTCTCTCCCAAACGAATGGAATAATTACATATC ATTCATACACCAGCGCCTTCTCATCGGATCCCTCCAAGAGCAACACTGGAAAAAAAGTTTATCCGAGATGTACCG TGTCCTCGTCCCAGGAGGGTGGGTACAACTCCAAGAACCATACTGGACACTCACTTCCCCGTCACAAATGATACG AGACCATACGGCGTATGCATTGAAGAACGAACTGTGTCGAAAACGCGTAGCGGTTTGGGATATAGTCAAACATCT TGGGAGTTGGCTGGAACAAGCTGGGTTCGTGAATGTTGAGTTAGTAGAGAAAATACGGCTACCTCTGGGTTCTTG GGGAGGCGAAAGAGGAAGAATCGGTTTGGAGAATATTTTAGAGTTGTTTCGTGGCTTCAGAAAACCCATTATGGA TGAAGATGGTTTGGGTTTGGTGAACGATGAAGAGGCATTTGATGCTATGCTGGATGATCTCAAGGCCCAATGCGA AGCCACGCCAGGTACTTACTACGAGTACTCGGTATTTATTGGGCAAAAGCCTTATTCTTCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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