Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|096250
Gene name
Locationscaffold_6:2036579..2038529
Strand+
Gene length (bp)1950
Transcript length (bp)1080
Coding sequence length (bp)1080
Protein length (aa) 360

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20152 DUF6534 Family of unknown function (DUF6534) 4.4E-12 169 242

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane Signal peptide|Transmembrane domain 0.0847 0.1061 0.1864 0.6633 0.0849 0.001 0.0705 0.3637 0.371 0.0073

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 12 34 22
2 46 68 22
3 83 105 22
4 117 139 22
5 154 171 17
6 192 214 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup19
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|004100
Agaricus bisporus var bisporus H39 AgabiH39|406100
Agaricus bisporus var bisporus H39 AgabiH39|386300
Agaricus bisporus var bisporus H39 AgabiH39|386200
Agaricus bisporus var bisporus H39 AgabiH39|102060
Agaricus bisporus var bisporus H39 AgabiH39|095970
Agaricus bisporus var bisporus H39 AgabiH39|103490
Agaricus bisporus var bisporus H39 AgabiH39|095720
Agaricus bisporus var bisporus H39 AgabiH39|022930
Agaricus bisporus var bisporus H39 AgabiH39|020260
Agaricus bisporus var bisporus H39 AgabiH39|020250
Agaricus bisporus var bisporus H39 AgabiH39|095960
Agaricus bisporus var bisporus H97 AgabiH97|096260
Agaricus bisporus var bisporus H97 AgabiH97|103490
Agaricus bisporus var bisporus H97 AgabiH97|103480
Agaricus bisporus var bisporus H97 AgabiH97|103470
Agaricus bisporus var bisporus H97 AgabiH97|102060
Agaricus bisporus var bisporus H97 AgabiH97|096250 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|020260
Agaricus bisporus var bisporus H97 AgabiH97|095960
Agaricus bisporus var bisporus H97 AgabiH97|095720
Agaricus bisporus var bisporus H97 AgabiH97|022930
Agaricus bisporus var bisporus H97 AgabiH97|020250
Agaricus bisporus var bisporus H97 AgabiH97|004100
Agaricus bisporus var bisporus H97 AgabiH97|095970
Rhodonia placenta FPRL280 RhoplFPRL280|25_45
Rhodonia placenta FPRL280 RhoplFPRL280|168_9
Rhodonia placenta FPRL280 RhoplFPRL280|227_13
Rhodonia placenta FPRL280 RhoplFPRL280|435_5

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|096250
MAGPAEVAHGSILIGTVINILLFGIMIAQVYIYYTSYRRDTLFLKLYVLALFLVDTINTVFNIVYIYVCLILHFG
DGDYLTVTNWQFATGPALTGVISLMVQLFFAWRIHMLTRNWFLVAIVSILSLASAICTFLTTYEVTIVPQFVRFQ
EFKGIPIVCQYLEGYIANLLVRRRRKTGFKKSDLIVDRIIRITVQTGLATSVIAAVDLALYLGSPSGIHLLFNFT
LCKFYSNSLMSSLNSRNRSRHGHTTLDNVFGEGPGQSHTNDHPTDGWQEHDMSNSRRTREKPLTTLDSVGSQRTG
VYVHVESHEMRDVETQGKDLVENRKVVVPSGINYGVQGKSKEPSFSSLSDTCDHKGSVI*
Coding >AgabiH97|096250
ATGGCCGGGCCAGCAGAGGTTGCTCATGGGTCAATTCTCATCGGAACCGTGATCAATATCCTTCTATTTGGTATC
ATGATCGCCCAGGTCTATATCTATTATACAAGCTATAGACGGGATACACTCTTTTTGAAACTCTACGTTCTTGCG
CTCTTTTTAGTCGACACAATCAATACTGTGTTCAACATCGTATACATATACGTCTGCCTAATTCTGCACTTCGGG
GATGGCGATTACCTGACAGTGACAAATTGGCAATTCGCAACAGGTCCTGCCTTAACAGGTGTAATCTCGCTCATG
GTTCAACTCTTTTTCGCCTGGAGAATCCATATGTTAACAAGAAATTGGTTTCTGGTGGCCATCGTTTCGATACTC
TCTCTTGCATCTGCAATATGTACCTTCCTTACAACCTATGAGGTCACCATCGTTCCGCAATTCGTTAGATTCCAA
GAGTTCAAGGGTATTCCAATTGTTTGTCAATATCTAGAGGGATATATCGCTAATCTCCTCGTTAGGCGGAGGCGT
AAGACGGGTTTCAAAAAGTCGGACTTGATAGTGGATCGCATTATTCGCATAACTGTGCAAACTGGCCTAGCTACT
TCGGTGATAGCTGCTGTCGATTTAGCACTTTATCTCGGTAGCCCTTCTGGAATACATTTGCTATTCAATTTCACC
TTGTGCAAGTTCTACTCGAATTCTCTCATGAGTAGTCTCAATTCTCGAAATCGTTCGAGACATGGCCACACAACC
CTGGATAATGTATTTGGCGAGGGTCCTGGACAATCTCATACTAATGATCATCCGACGGATGGTTGGCAAGAACAT
GATATGAGCAATTCGCGACGAACAAGGGAAAAGCCGCTAACCACTCTTGATTCTGTGGGTTCTCAAAGAACGGGG
GTGTATGTCCATGTGGAGTCCCATGAGATGCGAGACGTGGAGACACAAGGGAAAGATCTTGTTGAAAACAGAAAG
GTTGTTGTTCCCTCCGGTATTAACTATGGAGTGCAAGGCAAATCCAAGGAGCCCAGTTTTTCGTCGCTATCTGAC
ACATGCGATCATAAAGGATCCGTGATCTGA
Transcript >AgabiH97|096250
ATGGCCGGGCCAGCAGAGGTTGCTCATGGGTCAATTCTCATCGGAACCGTGATCAATATCCTTCTATTTGGTATC
ATGATCGCCCAGGTCTATATCTATTATACAAGCTATAGACGGGATACACTCTTTTTGAAACTCTACGTTCTTGCG
CTCTTTTTAGTCGACACAATCAATACTGTGTTCAACATCGTATACATATACGTCTGCCTAATTCTGCACTTCGGG
GATGGCGATTACCTGACAGTGACAAATTGGCAATTCGCAACAGGTCCTGCCTTAACAGGTGTAATCTCGCTCATG
GTTCAACTCTTTTTCGCCTGGAGAATCCATATGTTAACAAGAAATTGGTTTCTGGTGGCCATCGTTTCGATACTC
TCTCTTGCATCTGCAATATGTACCTTCCTTACAACCTATGAGGTCACCATCGTTCCGCAATTCGTTAGATTCCAA
GAGTTCAAGGGTATTCCAATTGTTTGTCAATATCTAGAGGGATATATCGCTAATCTCCTCGTTAGGCGGAGGCGT
AAGACGGGTTTCAAAAAGTCGGACTTGATAGTGGATCGCATTATTCGCATAACTGTGCAAACTGGCCTAGCTACT
TCGGTGATAGCTGCTGTCGATTTAGCACTTTATCTCGGTAGCCCTTCTGGAATACATTTGCTATTCAATTTCACC
TTGTGCAAGTTCTACTCGAATTCTCTCATGAGTAGTCTCAATTCTCGAAATCGTTCGAGACATGGCCACACAACC
CTGGATAATGTATTTGGCGAGGGTCCTGGACAATCTCATACTAATGATCATCCGACGGATGGTTGGCAAGAACAT
GATATGAGCAATTCGCGACGAACAAGGGAAAAGCCGCTAACCACTCTTGATTCTGTGGGTTCTCAAAGAACGGGG
GTGTATGTCCATGTGGAGTCCCATGAGATGCGAGACGTGGAGACACAAGGGAAAGATCTTGTTGAAAACAGAAAG
GTTGTTGTTCCCTCCGGTATTAACTATGGAGTGCAAGGCAAATCCAAGGAGCCCAGTTTTTCGTCGCTATCTGAC
ACATGCGATCATAAAGGATCCGTGATCTGA
Gene >AgabiH97|096250
ATGGCCGGGCCAGCAGAGGTTGCGTACGTTTTTATCCATCCCCTTTCATGCACAGCACATCGAATCAACATTATC
AATAGTCATGGGTCAATTCTCATCGGAACCGTGATCAATATCCTTCTATTTGGTATCATGATCGCCCAGGTCTAT
ATCTATTATACAAGCTATAGACGGTGAGTAAGGGTTTTCTGTATCGATGCCGCTCAATAATAACTATATCGTTTG
CAGGGATACACTCTTTTTGAAACTCTACGTACGTCGCTATGTTATAAGTGTGGTCAAGGATGACTCTGAAATCAA
GCCATCTCGCTCAGGTTCTTGCGCTCTTTTTAGTCGACACAATCAATACTGTGTTCAACATCGTATACATATACG
TCTGCCTAATTCTGCACTTCGGTAAGTGCCTCTCGGTGCCCATACAGTATCTGGTCGCTCAACGAATGACTCGCA
GGGGATGGCGATTACCTGACAGTGACAAATTGGCGTGGGTATCCTGTAGCTTCTCTCTAGAAGCTGATTTATCTG
ATTTCATCTTACAGAATTCGCAACAGGTGATGGTGGTTTATATTGGAAGGGGCTGAATCTTACTGAATTGTACCT
GCTGCGGAAATTTAGGTCCTGCCTTAACAGTAAGCCTCATGTACGACGGCACATCCGAAAACTAATTAATTGTTT
GAAATCAAGGGTGTAATCTCGCTCATGGTTCAACTCTTTTTCGCCTGGAGAATCCATATGTTAACAAGAAATTGG
TTTCTGGTGGCCATCGTTTCGATACTCTCTCTTGCATCTGCAAGTACGTCCCTTTTGAGTGATCTTCATGAGAGT
CCTCCATTCATTCTCCGATCTTTTTTTTCAGTATGTACCTTCCTTACAACCTATGAGGTCACCATCGTTCCGCAA
TTCGTTAGATTCCAAGAGTTCAAGGTCAGCGAATAAGCTTCTTCCGATTTGAGGCATTTGATTCCAGCCATACGA
ATTAAGGGTATTCCAATTGGTTGGTTGGCCTCTGCCGTCGCTGCGGATATCACGATCACTACGATCCTTGTGTGG
CACTTGTGAGTAGTTTGTCAATATCTAGAGGGATATATCGCTAATCTCCTCGTTAGGGTAAGTTGACCTGATTTT
TCGGGCCAAAGTACGACATCTCAATTGTATCCAGCGGAGGCGTAAGACGGGTTTCAAAAAGTCGGACTTGATAGT
GGATCGCATTATTCGCAGTAAGTCAAATTTGAAATTCAAATTATTTGGAGACTTAAAGTGGGGCCTGCTCAGTAA
CTGTGCAAACTGGCCTAGCTACTTCGGTGATAGCTGCTGTCGATTTAGCACTTTATCTCGGTAGCGTAAGTAAAT
TCGTTTTTCTGTATGCCGGCGTTGATCTAATTAATCTCGGCTCTCAAAGCCTTCTGGAATGTGAGTGGCATAAAT
CGATGAAGTTTTGATTTTAGATAAACTAAACATCCAATCGGCAGACATTTGCTATTCAATTTCACCTTGTGCAAG
TTCTACTCGAATTCTCTCATGAGTAGTCTCAATTCTCGAAATCGTTCGAGACATGGCCACACAACCCTGGATAAT
GTATTTGGCGAGGGTCCTGGACAATCTCATACTAATGATCATCCGACGGATGGTTGGCAAGAACATGATATGAGC
AATTCGCGACGAACAAGGGAAAAGGTGCGAATCTTATTGCTTTGCAAATACTTTCTGCTAATAGGATTCATTTAT
TAGCCGCTAACCACTCTTGATTCTGTGGGTTCTCAAAGAACGGGGGTGTATGTCCATGTGGAGTCCCATGAGATG
CGAGACGTGGAGACACAAGGGAAAGATCTTGTTGAAAACAGAAAGGTTGTTGTTCCCTCCGGTATTAACTATGGA
GTGCAAGGCAAATCCAAGGAGCCCAGTTTTTCGTCGCTATCTGACACATGCGATCATAAAGGATCCGTGATCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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