Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|095940
Gene name
Locationscaffold_6:1963332..1965161
Strand-
Gene length (bp)1829
Transcript length (bp)1320
Coding sequence length (bp)1320
Protein length (aa) 440

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 3.8E-34 3 367

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 1 439 1.0E-86
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 2 439 2.0E-73
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 1 439 2.0E-72
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 1 437 7.0E-66
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 8 437 6.0E-58
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Swissprot ID Swissprot Description Start End E-value
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 1 439 1.0E-86
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 2 439 2.0E-73
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 1 439 2.0E-72
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 1 437 7.0E-66
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 8 437 6.0E-58
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 1 425 3.0E-38
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 1 313 5.0E-34
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 1 412 1.0E-33
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 1 290 2.0E-33
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 3 430 2.0E-32
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 3 420 4.0E-31
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 3 424 9.0E-31
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 3 375 2.0E-30
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 6 425 4.0E-27
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 3 382 8.0E-27
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 2 307 1.0E-25
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 3 303 2.0E-25
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 8 419 1.0E-24
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 70 207 7.0E-24
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 3 432 1.0E-23
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 1 430 5.0E-22
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 4 414 1.0E-20
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 3 285 6.0E-20
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 4 417 7.0E-17
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 30 368 2.0E-16
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 4 304 6.0E-16
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 30 408 2.0E-13
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 1 290 8.0E-11
sp|P0AA76|DGOT_ECOLI D-galactonate transporter OS=Escherichia coli (strain K12) GN=dgoT PE=1 SV=1 4 303 2.0E-10
sp|P0AA77|DGOT_ECOL6 D-galactonate transporter OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dgoT PE=3 SV=1 4 303 2.0E-10
sp|P42237|GUDP_BACSU Probable glucarate transporter OS=Bacillus subtilis (strain 168) GN=gudP PE=3 SV=2 1 309 6.0E-08
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 4 308 7.0E-07
sp|Q1L8X9|VGLU3_DANRE Vesicular glutamate transporter 3 OS=Danio rerio GN=slc17a8 PE=3 SV=2 43 307 2.0E-06
sp|Q46916|GUDP_ECOLI Probable glucarate transporter OS=Escherichia coli (strain K12) GN=gudP PE=1 SV=1 1 285 3.0E-06
sp|Q5W8I8|VGL2A_DANRE Vesicular glutamate transporter 2.1 OS=Danio rerio GN=slc17a6b PE=2 SV=2 43 307 9.0E-06
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005215 transporter activity No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 32 54 22
2 61 80 19
3 90 112 22
4 121 143 22
5 153 175 22
6 230 252 22
7 262 284 22
8 291 308 17
9 318 340 22
10 352 374 22
11 384 406 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|095940
MFYLLSFIDRTNVANARVAGMQADLKMTNHDYSVALTVTYVPYIIAELPSNLLLKAVGPNWMLPTMLTLWGIVVT
LQGVVTSYSGLLACRFFLGLFEGGVFPGLVLYLSFFYPRQRLQWRISAFFSCASLSGAFSGLLAFGIINLDGVGG
KRGWAWIFFLEGIFTVLFGVVSFWLLPKSPAHAYFFNEKEKNYVIERLKDDGATGKDASVDAFSWREVRKAFTLP
QTWILGVVLFCDGTVLYGLAYFAPSIIQGLGFTAARAQLMSVPPFAVAFVTAMISAFISDHYHCRGLVLIFSSVM
CVIGFGMFLGSQSHSVQYGSLFMSIPGTYIVAPTLSTWLANNVAPHTRRATAIAIGFMLTNFGGILATWLLGALS
PAPRYTKATIVLLVFSVLMVLFSALNLGYLWDQNKKKRVIREGMDMSTEDLSLGDKSAWFEYNL*
Coding >AgabiH97|095940
ATGTTCTATCTCTTGTCTTTCATAGACCGTACGAATGTGGCGAACGCTCGTGTGGCGGGGATGCAGGCAGATCTC
AAAATGACCAACCATGATTACAGTGTTGCTTTAACTGTAACATACGTTCCTTATATCATAGCGGAATTGCCTTCG
AATCTGTTACTCAAGGCTGTAGGTCCAAATTGGATGCTACCCACCATGTTAACGCTTTGGGGCATTGTTGTCACT
TTACAAGGTGTTGTCACGTCCTATAGTGGTTTACTGGCATGTCGGTTCTTCCTTGGATTGTTCGAAGGTGGTGTA
TTCCCCGGCCTCGTTCTTTACCTTTCCTTCTTCTATCCGCGGCAGAGGCTTCAATGGAGAATTTCCGCTTTCTTC
TCCTGTGCTTCGTTATCAGGCGCATTTTCGGGTCTCCTGGCCTTCGGTATCATCAATTTGGATGGCGTCGGTGGC
AAGCGTGGCTGGGCATGGATTTTCTTCCTCGAGGGAATCTTTACAGTCCTTTTCGGCGTTGTGTCATTCTGGCTC
CTACCGAAAAGCCCTGCACATGCTTATTTCTTCAACGAGAAGGAAAAGAATTATGTAATCGAGAGGCTCAAAGAT
GATGGTGCAACTGGAAAAGATGCCTCCGTTGATGCTTTCAGTTGGAGAGAAGTTCGTAAAGCTTTCACGCTCCCT
CAGACCTGGATCTTGGGTGTTGTCCTCTTCTGTGATGGTACTGTTCTTTACGGCCTTGCCTACTTCGCGCCATCA
ATTATTCAAGGTCTTGGATTTACGGCTGCTCGTGCGCAACTCATGAGTGTCCCGCCTTTTGCTGTGGCCTTCGTC
ACTGCGATGATTTCTGCTTTCATTTCCGATCACTATCACTGCCGTGGGCTAGTCCTCATATTCTCATCCGTTATG
TGCGTCATAGGCTTTGGCATGTTCCTCGGCTCACAAAGCCATAGCGTACAATATGGTTCCTTGTTTATGTCTATT
CCAGGAACCTACATAGTCGCACCAACCCTCTCCACCTGGCTAGCTAACAACGTAGCTCCCCATACTCGAAGGGCC
ACAGCCATCGCAATCGGTTTCATGCTCACCAATTTTGGAGGCATCTTAGCCACATGGCTATTGGGAGCGCTTAGT
CCGGCACCAAGGTATACCAAGGCTACAATCGTGCTTTTGGTGTTTTCGGTGCTTATGGTATTGTTTTCTGCGTTA
AATTTGGGATACCTTTGGGACCAGAATAAAAAGAAGAGGGTCATTAGGGAGGGGATGGATATGAGTACGGAGGAT
CTGAGTTTGGGAGATAAGTCTGCTTGGTTTGAGTATAATCTTTGA
Transcript >AgabiH97|095940
ATGTTCTATCTCTTGTCTTTCATAGACCGTACGAATGTGGCGAACGCTCGTGTGGCGGGGATGCAGGCAGATCTC
AAAATGACCAACCATGATTACAGTGTTGCTTTAACTGTAACATACGTTCCTTATATCATAGCGGAATTGCCTTCG
AATCTGTTACTCAAGGCTGTAGGTCCAAATTGGATGCTACCCACCATGTTAACGCTTTGGGGCATTGTTGTCACT
TTACAAGGTGTTGTCACGTCCTATAGTGGTTTACTGGCATGTCGGTTCTTCCTTGGATTGTTCGAAGGTGGTGTA
TTCCCCGGCCTCGTTCTTTACCTTTCCTTCTTCTATCCGCGGCAGAGGCTTCAATGGAGAATTTCCGCTTTCTTC
TCCTGTGCTTCGTTATCAGGCGCATTTTCGGGTCTCCTGGCCTTCGGTATCATCAATTTGGATGGCGTCGGTGGC
AAGCGTGGCTGGGCATGGATTTTCTTCCTCGAGGGAATCTTTACAGTCCTTTTCGGCGTTGTGTCATTCTGGCTC
CTACCGAAAAGCCCTGCACATGCTTATTTCTTCAACGAGAAGGAAAAGAATTATGTAATCGAGAGGCTCAAAGAT
GATGGTGCAACTGGAAAAGATGCCTCCGTTGATGCTTTCAGTTGGAGAGAAGTTCGTAAAGCTTTCACGCTCCCT
CAGACCTGGATCTTGGGTGTTGTCCTCTTCTGTGATGGTACTGTTCTTTACGGCCTTGCCTACTTCGCGCCATCA
ATTATTCAAGGTCTTGGATTTACGGCTGCTCGTGCGCAACTCATGAGTGTCCCGCCTTTTGCTGTGGCCTTCGTC
ACTGCGATGATTTCTGCTTTCATTTCCGATCACTATCACTGCCGTGGGCTAGTCCTCATATTCTCATCCGTTATG
TGCGTCATAGGCTTTGGCATGTTCCTCGGCTCACAAAGCCATAGCGTACAATATGGTTCCTTGTTTATGTCTATT
CCAGGAACCTACATAGTCGCACCAACCCTCTCCACCTGGCTAGCTAACAACGTAGCTCCCCATACTCGAAGGGCC
ACAGCCATCGCAATCGGTTTCATGCTCACCAATTTTGGAGGCATCTTAGCCACATGGCTATTGGGAGCGCTTAGT
CCGGCACCAAGGTATACCAAGGCTACAATCGTGCTTTTGGTGTTTTCGGTGCTTATGGTATTGTTTTCTGCGTTA
AATTTGGGATACCTTTGGGACCAGAATAAAAAGAAGAGGGTCATTAGGGAGGGGATGGATATGAGTACGGAGGAT
CTGAGTTTGGGAGATAAGTCTGCTTGGTTTGAGTATAATCTTTGA
Gene >AgabiH97|095940
ATGTTCTATCTCTTGTCTTTCATAGTAGGTGAAACTACCTCTATGAATACGCTGAGCTGACTCCCCTCGTAGGAC
CGTACGAATGTGGCGAACGCTCGTGTGGCGGGGATGCAGGCAGATCTCAAAATGACCAACCATGATTACAGTGTT
GCTTTAACTGTAACATACGTTCCTTATATCATAGCGGAATTGCCTTCGAATCTGTTACTCAAGGTGAGCCGCCGG
TTCACTTAGCTACTCGTTGTCCTGGCATCGTTGACATATTGTTTCGTCAGGCTGTAGGTCCAAATTGGATGCTAC
CCACCATGTTAACGCTTTGGGGCATTGTTGTCACTTTACAAGGTTTGTGTCAACTACGCTCTTTTGCGCCACGAA
CTTCATGTCCGCGGAAATAGGTGTTGTCACGTCCTATAGTGGTTTACTGGCATGTCGGTTCTTCCTTGGATTGTT
CGAAGGTTGGCTTCCCATCTGTGCTCGTGTCTAGCAGTTGCCTCATGGATTGCATTAGGTGGTGTATTCCCCGGC
CTCGTTCTTTACCTTTCCTTCTTCTATCCGCGGCAGAGGCTTCAATGGAGGTAAGCAAATTTCTAGAAAAATAAA
GTGGACGAAAACCAACATGGTTCGCATAGAATTTCCGCTTTCTTCTCCTGTGCTTCGTTATCAGGCGCATTTTCG
GGTCTCCTGGCCTTCGGTATCATCAATTTGGATGGCGTCGGTGGCAAGCGTGGCTGGGCATGGATTTTCTTCCTC
GAGGGAATCTTTACAGTCCTTTTCGGCGTTGTGTCATTCTGGCTCCTACCGAAAAGCCCTGCACATGCTTATTTC
TTCAACGAGAAGGAAAAGAATTATGTAATCGAGAGGCTCAAAGATGATGGTGCAACTGGAAAAGATGCCTCCGTT
GATGCTTTCAGTTGGAGAGAAGTTCGTAAAGCTTTCACGCTCCCTCAGACCTGGATCTTGGGTGTTGTCCTCTTC
TGTGATGGTGGGTGAACCTAGTTCTACGTCGGTGAGGATATGACTCACAGTTTTCGCCACAGGTACTGTTCTTTA
CGGCCTTGCCTAGTAAGTCTTCGCCGCATCGCTAAAATGAAAAGCAAAAATTGATAAAATGACATCTAGCTTCGC
GCCATCAATTATTCAAGGTCTTGGATTTACGGCTGCTCGTGCGCAACTCATGAGTGTCCCGCCTTTTGCTGTGGC
CTTCGTCAGTGCGTAACTAATTATTTCTTTCGCATATCGTTCCCCGCCTAACGTGTTCGATTCTCTCCGACAGCT
GCGATGATTTCTGCTTTCATTTCCGATCACTATCACTGCCGTGGGCTAGTCCTCATATTCTCATCCGTTATGTGC
GTCATAGGCTTTGGCATGTTCCTCGGTATGCCTTCTATCTTTAGCTATACTTGATTGATTCTAACGCACGAGCCC
GACTTCTATCAGGCTCACAAAGCCATAGCGTACAATATGGTTCCTTGTTTATGTCTATTCCAGGAACCTACATAG
TCGCACCAACCCTCTCCACCTGGCTAGCTAACAACGTAGCTCCCCATACTCGAAGGGCCACAGCCATCGCAATCG
GTTTCATGCTCACCAATTTTGGAGGCATCTTAGCCACATGGCTATTGGGAGCGCTTAGTCCGGCACCAAGGTATA
CCAAGGCTACAATCGTGCTTTTGGTGTTTTCGGTGCTTATGGTATTGTTTTCTGCGTTAAATTTGGGATACCTTT
GGGACCAGAATAAAAAGAAGAGGGTCATTAGGGAGGGGATGGATATGAGTACGGAGGATCTGAGTTTGGGAGATA
AGTCTGCTTGGTTTGAGTATAATCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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