Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|094710
Gene name
Locationscaffold_6:1648510..1650332
Strand+
Gene length (bp)1822
Transcript length (bp)1533
Coding sequence length (bp)1533
Protein length (aa) 511

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 482 504 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|094710
MFASIVALLHMVFPSHVVQRVQAIVSTFSRSTVISVRRKSIQSIELEWIWAICVSLLGQNPVTPQDVRFKLFPLT
PTWLFSPLTNVSPLWYSLAILKATWLLATISYASARGVGRASAEIVGHVSRQLIMHIWSLGLIQVQMLRLDVLNR
LGAANFALNNRVTSQPFFGLRIGQISFFDLCVPQYLKVWTLALIYRLLDPDRRGFPCNDSPTERRERDAAHETFF
SEGPMNFADSLQKQKVDRQRSHKENLLIAVVLSPSCGGSTTHSRRKTHTAPRSSVPETAISGFVVCIVNYSYSTA
KQSEACSDQLFCDHSFESARWSLAVIIDDSTSFNCLDTDFHETMTSLHLYRLKASNEDEQGTLPITAAIPLRIQG
TPPSIPRLQIASASTVACFSAMNSLGIVHPDINFGSTSNANNHEVVNLSRDSDKRSLSFAALHYQGQVRDSVYLA
DADNWGTLWTTYSLVRILGNAMLMRGVRQVQVLYSPILVNFFLFNILIYKFSSYLSLERR*
Coding >AgabiH97|094710
ATGTTCGCCTCCATAGTCGCATTGCTTCACATGGTTTTCCCATCGCATGTTGTCCAAAGAGTTCAAGCCATAGTT
TCCACGTTCTCCCGGTCGACAGTAATATCCGTCAGACGAAAGTCCATCCAATCAATAGAACTCGAATGGATCTGG
GCCATCTGCGTTAGCCTCCTTGGCCAAAACCCAGTAACTCCGCAGGATGTCCGCTTCAAGCTGTTTCCTTTGACC
CCTACTTGGTTATTTTCTCCCCTAACGAATGTCAGCCCTCTTTGGTATTCTTTGGCTATCCTCAAAGCGACCTGG
TTGCTCGCCACAATTAGCTATGCATCTGCTCGAGGAGTCGGAAGGGCTAGTGCCGAAATTGTTGGCCACGTTTCC
CGACAATTGATAATGCATATTTGGAGTCTCGGTCTTATTCAAGTTCAAATGCTCCGACTCGATGTACTCAACCGC
CTAGGGGCGGCAAACTTTGCCCTGAACAATCGTGTCACTAGCCAACCTTTTTTTGGCCTTCGAATTGGACAGATC
AGTTTTTTCGACCTCTGCGTTCCCCAGTATCTGAAGGTGTGGACACTAGCATTAATTTATCGACTTCTCGACCCA
GATCGGAGAGGCTTTCCCTGTAATGATAGCCCCACGGAAAGGCGAGAACGCGATGCTGCCCACGAAACATTTTTC
TCGGAAGGACCTATGAATTTCGCGGATTCGTTACAGAAACAGAAAGTGGACAGACAGAGAAGCCACAAGGAAAAC
TTGCTTATCGCAGTCGTCTTGTCACCATCCTGCGGAGGCTCGACTACTCACTCGCGACGAAAGACTCATACTGCT
CCTCGCTCTTCCGTTCCGGAAACTGCCATTTCTGGATTTGTCGTTTGCATTGTCAACTATAGCTACTCAACGGCG
AAGCAATCCGAAGCTTGTAGCGATCAATTGTTCTGCGACCATTCCTTTGAAAGTGCGCGGTGGTCGTTAGCGGTC
ATCATCGATGATTCCACTAGCTTCAACTGTCTGGATACCGACTTCCATGAGACTATGACGAGCTTACATTTGTAC
CGGCTCAAAGCCTCGAATGAGGATGAACAGGGGACGCTTCCGATCACTGCCGCTATACCTCTGCGGATTCAAGGT
ACCCCTCCTTCGATTCCACGACTTCAGATCGCCAGTGCGTCAACCGTGGCATGCTTTTCTGCCATGAACTCTCTT
GGCATCGTTCACCCTGATATCAACTTTGGCTCTACAAGCAACGCGAACAATCATGAAGTTGTCAATTTAAGCCGC
GATTCGGATAAACGGAGCCTATCTTTCGCTGCCCTGCACTACCAAGGACAGGTTCGGGATTCCGTGTATCTTGCA
GATGCAGATAATTGGGGCACTCTGTGGACAACCTATTCACTCGTCAGGATCCTCGGAAACGCGATGCTAATGCGA
GGTGTTCGTCAAGTACAAGTTCTATATTCACCCATCCTTGTCAATTTTTTTTTGTTCAATATTCTTATATATAAA
TTTTCCTCTTATCTTTCGTTAGAAAGACGCTAG
Transcript >AgabiH97|094710
ATGTTCGCCTCCATAGTCGCATTGCTTCACATGGTTTTCCCATCGCATGTTGTCCAAAGAGTTCAAGCCATAGTT
TCCACGTTCTCCCGGTCGACAGTAATATCCGTCAGACGAAAGTCCATCCAATCAATAGAACTCGAATGGATCTGG
GCCATCTGCGTTAGCCTCCTTGGCCAAAACCCAGTAACTCCGCAGGATGTCCGCTTCAAGCTGTTTCCTTTGACC
CCTACTTGGTTATTTTCTCCCCTAACGAATGTCAGCCCTCTTTGGTATTCTTTGGCTATCCTCAAAGCGACCTGG
TTGCTCGCCACAATTAGCTATGCATCTGCTCGAGGAGTCGGAAGGGCTAGTGCCGAAATTGTTGGCCACGTTTCC
CGACAATTGATAATGCATATTTGGAGTCTCGGTCTTATTCAAGTTCAAATGCTCCGACTCGATGTACTCAACCGC
CTAGGGGCGGCAAACTTTGCCCTGAACAATCGTGTCACTAGCCAACCTTTTTTTGGCCTTCGAATTGGACAGATC
AGTTTTTTCGACCTCTGCGTTCCCCAGTATCTGAAGGTGTGGACACTAGCATTAATTTATCGACTTCTCGACCCA
GATCGGAGAGGCTTTCCCTGTAATGATAGCCCCACGGAAAGGCGAGAACGCGATGCTGCCCACGAAACATTTTTC
TCGGAAGGACCTATGAATTTCGCGGATTCGTTACAGAAACAGAAAGTGGACAGACAGAGAAGCCACAAGGAAAAC
TTGCTTATCGCAGTCGTCTTGTCACCATCCTGCGGAGGCTCGACTACTCACTCGCGACGAAAGACTCATACTGCT
CCTCGCTCTTCCGTTCCGGAAACTGCCATTTCTGGATTTGTCGTTTGCATTGTCAACTATAGCTACTCAACGGCG
AAGCAATCCGAAGCTTGTAGCGATCAATTGTTCTGCGACCATTCCTTTGAAAGTGCGCGGTGGTCGTTAGCGGTC
ATCATCGATGATTCCACTAGCTTCAACTGTCTGGATACCGACTTCCATGAGACTATGACGAGCTTACATTTGTAC
CGGCTCAAAGCCTCGAATGAGGATGAACAGGGGACGCTTCCGATCACTGCCGCTATACCTCTGCGGATTCAAGGT
ACCCCTCCTTCGATTCCACGACTTCAGATCGCCAGTGCGTCAACCGTGGCATGCTTTTCTGCCATGAACTCTCTT
GGCATCGTTCACCCTGATATCAACTTTGGCTCTACAAGCAACGCGAACAATCATGAAGTTGTCAATTTAAGCCGC
GATTCGGATAAACGGAGCCTATCTTTCGCTGCCCTGCACTACCAAGGACAGGTTCGGGATTCCGTGTATCTTGCA
GATGCAGATAATTGGGGCACTCTGTGGACAACCTATTCACTCGTCAGGATCCTCGGAAACGCGATGCTAATGCGA
GGTGTTCGTCAAGTACAAGTTCTATATTCACCCATCCTTGTCAATTTTTTTTTGTTCAATATTCTTATATATAAA
TTTTCCTCTTATCTTTCGTTAGAAAGACGCTAG
Gene >AgabiH97|094710
ATGTTCGCCTCCATAGTCGCATTGCTTCACATGGTTTTCCCATCGCATGTTGTCCAAAGAGTTCAAGCCATAGTT
TCCACGTTCTCCCGGTCGACAGTAATATCCGTCAGACGAAAGTCCATCCAATCAATAGAACTCGAATGGATCTGG
GCCATCTGCGTTAGCCTCCTTGGCCAAAACCCAGTAACTCCGCAGGATGTCCGCTTCAAGCTGTTTCCTTTGACC
CCTACTTGGTTATTTTCTCCCCTAACGAATGTCAGCCCTCTTTGGTATTCTTTGGCTATCCTCAAAGCGACCTGG
TTGCTCGCCACAATTAGCTATGCATCTGCTCGAGGAGTCGGAAGGGCTAGTGCCGAAATTGTTGGCCACGTTTCC
CGACAATTGATAATGCATATTTGGAGTCTCGGTCTTATTCAAGTTCAAATGCTCCGACTCGATGTACTCAACCGC
CTAGGGGCGGCAAACTTTGCCCTGAACAATCGTGTCACTAGCCAACCTTTTTTTGGCCTTCGAATTGGACAGATC
AGTTTTTTCGACCTCTGCGTTCCCCAGTATCTGAAGGTGTGGACACTAGCATTAATTTATCGACTTCTCGACCCA
GATCGGAGAGGCTTTCCCTGTAATGATAGCCCCACGGAAAGGCGAGAACGCGATGCTGCCCACGAAACATTTTTC
TCGGAAGGACCTATGAATTTCGCGGATTCGTTACAGAAACAGAAAGTGGACAGACAGAGAAGCCACAAGGAAAAC
TTGCTTATCGCAGTCGTCTTGTCACCATCCTGCGGAGGCTCGACTACTCACTCGCGACGAAAGACTCATACTGCT
CCTCGCTCTTCCGTTCCGGAAACTGCCATTTCTGGATTTGTCGTTTGCATTGTCAACTATAGCTACTCAACGGCG
AAGCAATCCGAAGCTTGTAGCGATCAATTGTTCTGCGACCATTCCTTTGAAAGTGCGCGGTGGTCGTTAGCGGTC
ATCATCGATGATTCCACTAGCTTCAACTGTCTGGATACCGACTTCCATGAGACTATGACGAGCTTACATTTGTAC
CGGCTCAAAGCCTCGAATGAGGATGAACAGGGGACGCTTCCGATCACTGCCGCTATACCTCTGCGGATTCAAGGT
ACCCCTCCTTCGATTCCACGACTTCAGATCGCCAGTGCGTCAACCGTGGTCAGTTTCATTGCTTCTTGAACACGT
TACAGACCCTGAAATCCCTTATAATAAGGCATGCTTTTCTGCCATGAACTCTCTTGGCATCGTTCACCCTGATAT
CAACTTTGGCTCTACAAGCAACGCGAACAATCATGAAGTTGTCAATTTAAGCCGCGATTCGGTTCCTAGAACTCA
TCATCAAGAGCTCGCTACAAAATCAAGGATAAACGGAGCCTATCTTTCGCTGCCCTGCACTACCAAGGACAGGTT
CGGTACGCAAGGTTCCAACACACCAAAACGCGAAGCTTACAGTTATGTTATTGACAATCCAGGGATTCCGTGTAT
CTTGCAGATGCAGATAATTGGGGCACTCTGTGGACAACCTATTCACTCGTCAGGATCCTCGGAAACGCGATGCTA
ATGCGAGGTGTTCGTCAAGTACAAGTTCTATATTCACCCATCCTTGTCAATTTTTTTTTGTTCAGTAAGTCATCT
CATAAATAGTGACGGTCATCGCTTACTAGTATTGGGCCTTCCACCGACGCCCCATGCTTTAACAGATATTCTTAT
ATATAAATTTTCCTCTTATGTGCGTATTGCGACAGTACCATGTAAGGTGACTAAAACTTACATGTAGCATGTACA
GCTTTCGTTAGAAAGACGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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