Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|093090
Gene name
Locationscaffold_6:1262606..1263556
Strand-
Gene length (bp)950
Transcript length (bp)738
Coding sequence length (bp)738
Protein length (aa) 246

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00293 NUDIX NUDIX domain 1.2E-12 51 128

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|A7MKE8|NUDL_CROS8 Uncharacterized Nudix hydrolase NudL OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=nudL PE=3 SV=1 39 193 3.0E-22
sp|A4WBH1|NUDL_ENT38 Uncharacterized Nudix hydrolase NudL OS=Enterobacter sp. (strain 638) GN=nudL PE=3 SV=1 39 189 1.0E-19
sp|B5XQ60|NUDL_KLEP3 Uncharacterized Nudix hydrolase NudL OS=Klebsiella pneumoniae (strain 342) GN=nudL PE=3 SV=1 39 193 8.0E-19
sp|A6TAY4|NUDL_KLEP7 Uncharacterized Nudix hydrolase NudL OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=nudL PE=3 SV=1 39 193 9.0E-19
sp|A8AFP5|NUDL_CITK8 Uncharacterized Nudix hydrolase NudL OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=nudL PE=3 SV=1 39 193 2.0E-18
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Swissprot ID Swissprot Description Start End E-value
sp|A7MKE8|NUDL_CROS8 Uncharacterized Nudix hydrolase NudL OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=nudL PE=3 SV=1 39 193 3.0E-22
sp|A4WBH1|NUDL_ENT38 Uncharacterized Nudix hydrolase NudL OS=Enterobacter sp. (strain 638) GN=nudL PE=3 SV=1 39 189 1.0E-19
sp|B5XQ60|NUDL_KLEP3 Uncharacterized Nudix hydrolase NudL OS=Klebsiella pneumoniae (strain 342) GN=nudL PE=3 SV=1 39 193 8.0E-19
sp|A6TAY4|NUDL_KLEP7 Uncharacterized Nudix hydrolase NudL OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=nudL PE=3 SV=1 39 193 9.0E-19
sp|A8AFP5|NUDL_CITK8 Uncharacterized Nudix hydrolase NudL OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=nudL PE=3 SV=1 39 193 2.0E-18
sp|B4SUL8|NUDL_SALNS Uncharacterized Nudix hydrolase NudL OS=Salmonella newport (strain SL254) GN=nudL PE=3 SV=1 39 157 3.0E-18
sp|P0A2K9|NUDL_SALTY Uncharacterized Nudix hydrolase NudL OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=nudL PE=3 SV=1 39 157 4.0E-18
sp|P0A2L0|NUDL_SALTI Uncharacterized Nudix hydrolase NudL OS=Salmonella typhi GN=nudL PE=3 SV=1 39 157 4.0E-18
sp|B4TXZ6|NUDL_SALSV Uncharacterized Nudix hydrolase NudL OS=Salmonella schwarzengrund (strain CVM19633) GN=nudL PE=3 SV=1 39 157 4.0E-18
sp|C0Q309|NUDL_SALPC Uncharacterized Nudix hydrolase NudL OS=Salmonella paratyphi C (strain RKS4594) GN=nudL PE=3 SV=1 39 157 4.0E-18
sp|A9MVU1|NUDL_SALPB Uncharacterized Nudix hydrolase NudL OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=nudL PE=3 SV=1 39 157 4.0E-18
sp|B5R2U5|NUDL_SALEP Uncharacterized Nudix hydrolase NudL OS=Salmonella enteritidis PT4 (strain P125109) GN=nudL PE=3 SV=1 39 157 4.0E-18
sp|Q57NI6|NUDL_SALCH Uncharacterized Nudix hydrolase NudL OS=Salmonella choleraesuis (strain SC-B67) GN=nudL PE=3 SV=1 39 157 4.0E-18
sp|B5FTK8|NUDL_SALDC Uncharacterized Nudix hydrolase NudL OS=Salmonella dublin (strain CT_02021853) GN=nudL PE=3 SV=1 39 157 4.0E-18
sp|Q6D4L1|NUDL_PECAS Uncharacterized Nudix hydrolase NudL OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=nudL PE=3 SV=1 48 189 8.0E-18
sp|B5BHD1|NUDL_SALPK Uncharacterized Nudix hydrolase NudL OS=Salmonella paratyphi A (strain AKU_12601) GN=nudL PE=3 SV=1 39 157 9.0E-18
sp|Q5PNL9|NUDL_SALPA Uncharacterized Nudix hydrolase NudL OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=nudL PE=3 SV=1 39 157 9.0E-18
sp|B4TKF7|NUDL_SALHS Uncharacterized Nudix hydrolase NudL OS=Salmonella heidelberg (strain SL476) GN=nudL PE=3 SV=1 39 157 9.0E-18
sp|B5F3R6|NUDL_SALA4 Uncharacterized Nudix hydrolase NudL OS=Salmonella agona (strain SL483) GN=nudL PE=3 SV=1 39 157 9.0E-18
sp|P43338|NUDL_ENTAE Uncharacterized Nudix hydrolase NudL (Fragment) OS=Enterobacter aerogenes GN=nudL PE=3 SV=1 35 141 4.0E-17
sp|Q7N3M0|NUDL_PHOLL Uncharacterized Nudix hydrolase NudL OS=Photorhabdus luminescens subsp. laumondii (strain TT01) GN=nudL PE=3 SV=1 48 188 2.0E-16
sp|B1JP41|NUDL_YERPY Uncharacterized Nudix hydrolase NudL OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=nudL PE=3 SV=1 35 192 1.0E-14
sp|Q66BW8|NUDL_YERPS Uncharacterized Nudix hydrolase NudL OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=nudL PE=3 SV=1 35 192 1.0E-14
sp|A4TKD0|NUDL_YERPP Uncharacterized Nudix hydrolase NudL OS=Yersinia pestis (strain Pestoides F) GN=nudL PE=3 SV=1 35 192 1.0E-14
sp|Q1CH51|NUDL_YERPN Uncharacterized Nudix hydrolase NudL OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=nudL PE=3 SV=1 35 192 1.0E-14
sp|A9R5X2|NUDL_YERPG Uncharacterized Nudix hydrolase NudL OS=Yersinia pestis bv. Antiqua (strain Angola) GN=nudL PE=3 SV=1 35 192 1.0E-14
sp|Q7CHW2|NUDL_YERPE Uncharacterized Nudix hydrolase NudL OS=Yersinia pestis GN=nudL PE=3 SV=1 35 192 1.0E-14
sp|B2K0H0|NUDL_YERPB Uncharacterized Nudix hydrolase NudL OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=nudL PE=3 SV=1 35 192 1.0E-14
sp|Q1C8W1|NUDL_YERPA Uncharacterized Nudix hydrolase NudL OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=nudL PE=3 SV=1 35 192 1.0E-14
sp|A7FJ95|NUDL_YERP3 Uncharacterized Nudix hydrolase NudL OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=nudL PE=3 SV=1 35 192 1.0E-14
sp|A1JMC0|NUDL_YERE8 Uncharacterized Nudix hydrolase NudL OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) GN=nudL PE=3 SV=1 39 189 1.0E-14
sp|Q23236|NDX3_CAEEL Nudix hydrolase 3 OS=Caenorhabditis elegans GN=ndx-3 PE=3 SV=2 54 233 6.0E-14
sp|P0C024|NUDT7_HUMAN Peroxisomal coenzyme A diphosphatase NUDT7 OS=Homo sapiens GN=NUDT7 PE=2 SV=1 54 244 2.0E-13
sp|Q92350|YDH5_SCHPO Probable nudix hydrolase C6G9.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6G9.05 PE=3 SV=1 35 196 2.0E-12
sp|B7NSW2|NUDL_ECO7I Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=nudL PE=3 SV=1 39 189 2.0E-12
sp|B7LPN4|NUDL_ESCF3 Uncharacterized Nudix hydrolase NudL OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=nudL PE=3 SV=1 39 189 3.0E-12
sp|Q8FGU5|NUDL_ECOL6 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=nudL PE=3 SV=1 39 189 3.0E-12
sp|Q99P30|NUDT7_MOUSE Peroxisomal coenzyme A diphosphatase NUDT7 OS=Mus musculus GN=Nudt7 PE=1 SV=2 49 244 4.0E-12
sp|A7ZMT6|NUDL_ECO24 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|Q3Z2F4|NUDL_SHISS Uncharacterized Nudix hydrolase NudL OS=Shigella sonnei (strain Ss046) GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|B7USI8|NUDL_ECO27 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|B7MBL9|NUDL_ECO45 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|B7L6U1|NUDL_ECO55 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli (strain 55989 / EAEC) GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|Q8XCQ2|NUDL_ECO57 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O157:H7 GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|B5YQV4|NUDL_ECO5E Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|B7MVU2|NUDL_ECO81 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O81 (strain ED1a) GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|B7M287|NUDL_ECO8A Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O8 (strain IAI1) GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|A1ABY1|NUDL_ECOK1 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O1:K1 / APEC GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|Q0TH20|NUDL_ECOL5 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|B7NBF9|NUDL_ECOLU Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|B6IBP0|NUDL_ECOSE Uncharacterized Nudix hydrolase NudL OS=Escherichia coli (strain SE11) GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|Q1RAX9|NUDL_ECOUT Uncharacterized Nudix hydrolase NudL OS=Escherichia coli (strain UTI89 / UPEC) GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|B2U449|NUDL_SHIB3 Uncharacterized Nudix hydrolase NudL OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|Q32FR6|NUDL_SHIDS Uncharacterized Nudix hydrolase NudL OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|B1LD60|NUDL_ECOSM Uncharacterized Nudix hydrolase NudL OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|A8A110|NUDL_ECOHS Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O9:H4 (strain HS) GN=nudL PE=3 SV=1 39 189 4.0E-12
sp|Q8WV74|NUDT8_HUMAN Nucleoside diphosphate-linked moiety X motif 8 OS=Homo sapiens GN=NUDT8 PE=1 SV=2 51 151 5.0E-12
sp|Q0T506|NUDL_SHIF8 Uncharacterized Nudix hydrolase NudL OS=Shigella flexneri serotype 5b (strain 8401) GN=nudL PE=3 SV=1 39 189 6.0E-12
sp|Q321V9|NUDL_SHIBS Uncharacterized Nudix hydrolase NudL OS=Shigella boydii serotype 4 (strain Sb227) GN=nudL PE=3 SV=1 39 189 6.0E-12
sp|Q83L76|NUDL_SHIFL Uncharacterized Nudix hydrolase NudL OS=Shigella flexneri GN=nudL PE=3 SV=1 39 189 6.0E-12
sp|Q9CR24|NUDT8_MOUSE Nucleoside diphosphate-linked moiety X motif 8 OS=Mus musculus GN=Nudt8 PE=1 SV=1 52 124 1.0E-11
sp|P43337|NUDL_ECOLI Uncharacterized Nudix hydrolase NudL OS=Escherichia coli (strain K12) GN=nudL PE=3 SV=1 39 189 1.0E-11
sp|B1J0S5|NUDL_ECOLC Uncharacterized Nudix hydrolase NudL OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=nudL PE=3 SV=1 39 189 1.0E-11
sp|B1XH80|NUDL_ECODH Uncharacterized Nudix hydrolase NudL OS=Escherichia coli (strain K12 / DH10B) GN=nudL PE=3 SV=1 39 189 1.0E-11
sp|C4ZZG9|NUDL_ECOBW Uncharacterized Nudix hydrolase NudL OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=nudL PE=3 SV=1 39 189 1.0E-11
sp|Q12524|PCD1_YEAST Peroxisomal coenzyme A diphosphatase 1, peroxisomal OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PCD1 PE=1 SV=1 47 185 2.0E-11
sp|O22951|NUD22_ARATH Nudix hydrolase 22, chloroplastic OS=Arabidopsis thaliana GN=NUDT22 PE=2 SV=2 39 167 3.0E-10
sp|Q8GYB1|NUD15_ARATH Nudix hydrolase 15, mitochondrial OS=Arabidopsis thaliana GN=NUDT15 PE=1 SV=2 41 192 2.0E-09
sp|Q8LET2|NUD11_ARATH Nudix hydrolase 11 OS=Arabidopsis thaliana GN=NUDT11 PE=1 SV=2 44 215 4.0E-09
sp|Q9NA25|NDX8_CAEEL Peroxisomal coenzyme A diphosphatase ndx-8 OS=Caenorhabditis elegans GN=ndx-8 PE=1 SV=1 40 194 1.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|093090
MATAFRSSSLVNLAKPLTPNSLKAIRHALSPAQQQPNSQPSQSQQGFKSRNAGVLIPLCNVEGKPGILFQVRART
LRCHSGQVSFPGGRIDETDISFLDGALRETEEELGIRPEEIDVLGEIGPPEKTLRGDIVWPYVGFVHERGSKDPE
SDDYPYPSLDLDKIRRAMSISEVAVVFHVPLTELVAASRLRSYLFRAERPYWAVDVTDLVRSAEIPSGERGSTAH
IRGRSRNMGADRLVSIIIVA*
Coding >AgabiH97|093090
ATGGCGACTGCTTTCAGATCTTCCTCTCTGGTCAATCTAGCCAAACCCTTGACTCCAAATTCTCTAAAAGCAATA
CGCCATGCGCTTTCACCTGCTCAACAACAGCCGAACTCCCAACCATCGCAGTCACAACAAGGTTTCAAGTCACGA
AACGCTGGTGTATTAATACCTCTTTGTAATGTCGAGGGAAAACCTGGAATACTATTTCAAGTGAGGGCGAGAACT
TTACGGTGTCACTCGGGACAGGTAAGCTTTCCAGGCGGAAGGATAGATGAGACTGACATTTCATTTCTGGACGGC
GCATTACGAGAAACTGAGGAAGAATTGGGTATACGTCCGGAAGAGATTGATGTACTAGGGGAGATAGGACCCCCA
GAAAAAACCCTACGAGGTGACATTGTATGGCCATACGTGGGATTTGTGCACGAAAGAGGATCCAAAGACCCGGAA
TCCGATGACTATCCCTACCCTTCTCTGGACCTTGACAAAATTCGACGAGCAATGTCTATATCAGAGGTGGCCGTC
GTGTTTCACGTCCCTCTGACTGAATTAGTTGCGGCTTCAAGGCTGCGATCATATCTCTTTCGTGCTGAACGACCC
TATTGGGCTGTTGATGTAACAGATCTGGTGCGGTCTGCGGAAATTCCAAGTGGGGAAAGAGGTTCTACTGCCCAT
ATCAGAGGCAGGAGTCGAAATATGGGGGCTGACAGGTTGGTTTCTATCATCATTGTTGCGTAG
Transcript >AgabiH97|093090
ATGGCGACTGCTTTCAGATCTTCCTCTCTGGTCAATCTAGCCAAACCCTTGACTCCAAATTCTCTAAAAGCAATA
CGCCATGCGCTTTCACCTGCTCAACAACAGCCGAACTCCCAACCATCGCAGTCACAACAAGGTTTCAAGTCACGA
AACGCTGGTGTATTAATACCTCTTTGTAATGTCGAGGGAAAACCTGGAATACTATTTCAAGTGAGGGCGAGAACT
TTACGGTGTCACTCGGGACAGGTAAGCTTTCCAGGCGGAAGGATAGATGAGACTGACATTTCATTTCTGGACGGC
GCATTACGAGAAACTGAGGAAGAATTGGGTATACGTCCGGAAGAGATTGATGTACTAGGGGAGATAGGACCCCCA
GAAAAAACCCTACGAGGTGACATTGTATGGCCATACGTGGGATTTGTGCACGAAAGAGGATCCAAAGACCCGGAA
TCCGATGACTATCCCTACCCTTCTCTGGACCTTGACAAAATTCGACGAGCAATGTCTATATCAGAGGTGGCCGTC
GTGTTTCACGTCCCTCTGACTGAATTAGTTGCGGCTTCAAGGCTGCGATCATATCTCTTTCGTGCTGAACGACCC
TATTGGGCTGTTGATGTAACAGATCTGGTGCGGTCTGCGGAAATTCCAAGTGGGGAAAGAGGTTCTACTGCCCAT
ATCAGAGGCAGGAGTCGAAATATGGGGGCTGACAGGTTGGTTTCTATCATCATTGTTGCGTAG
Gene >AgabiH97|093090
ATGGCGACTGCTTTCAGATCTTCCTCTCTGGTCAATCTAGCCAAACCCTTGACTCCAAATTCTCTAAAAGCAATA
CGCCATGCGCTTTCACCTGCTCAACAACAGCCGAACTCCCAACCATCGCAGTCACAACAAGGTTTCAAGTCACGA
AACGCTGGTGTATTAATACCTCTTTGTAATGTCGAGGGAAAACCTGGAATACTATTTCAAGTGAGGGCGAGAACT
TTACGGTGTCACTCGGGACAGGTAAGGTAAGGAAGGGTTGTTCGTGGGATTTCATTAACTATTTCTGAAGCCAAT
ATAGCTTTCCAGGCGGAAGGATAGATGAGGTCGGTTCAACATTCACATCTCGTTTTGAACAAAATTATGGAATAC
CTCCAAGACTGACATTTCATTTCTGGACGGCGCATTACGAGAAACTGAGGAAGAATTGGGTATACGTCCGGAAGA
GATTGATGTACTAGGGGAGATAGGACCCCCAGAAAAAACCCTACGAGGTGACATTGTATGGCCATACGTGGTATG
TATTAGGTATATATTTAGATTGGCGTTAACGAACCAACTCTACAGGGATTTGTGCACGAAAGAGGATCCAAAGAC
CCGGAATCCGATGACTATCCCTACCCTTCTCTGGACCTTGACAAAATTCGACGAGCAATGTCTATATCAGAGGTG
GCCGTCGTGTTTCACGTCCCTCTGACTGAATTAGTTGCGGCTTCAAGGCTGCGATCATATCTCTTTCGTGCTGAA
CGACCCTATTGGGCTGTTGATGTAACAGATCTGGTGCGGTCTGCGGAAATTCCAAGTGGGGAAAGAGGTTCTACG
TCAGTTAGTACTGAAGAGGTATACGGGGCTGTTGATCCCCAGACGGATGAAATAGTGCCCATATCAGAGGCAGGA
GTCGAAATATGGGGGCTGACAGGTTGGTTTCTATCATCATTGTTGCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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