Protein ID | AgabiH97|092700 |
Gene name | |
Location | scaffold_6:1181385..1183943 |
Strand | + |
Gene length (bp) | 2558 |
Transcript length (bp) | 1557 |
Coding sequence length (bp) | 1557 |
Protein length (aa) | 519 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07690 | MFS_1 | Major Facilitator Superfamily | 1.0E-27 | 62 | 424 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 2 | 492 | 5.0E-82 |
sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 14 | 497 | 2.0E-80 |
sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 17 | 482 | 8.0E-78 |
sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 4 | 497 | 3.0E-71 |
sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 46 | 471 | 9.0E-57 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 2 | 492 | 5.0E-82 |
sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 14 | 497 | 2.0E-80 |
sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 17 | 482 | 8.0E-78 |
sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 4 | 497 | 3.0E-71 |
sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 46 | 471 | 9.0E-57 |
sp|P70786|TUB3_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 25 | 350 | 4.0E-47 |
sp|Q44470|TUB4_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 46 | 430 | 3.0E-44 |
sp|O74923|YJ7D_SCHPO | Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 | 48 | 507 | 4.0E-36 |
sp|O94491|YC7A_SCHPO | Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 | 40 | 502 | 2.0E-35 |
sp|P76470|RHMT_ECOLI | Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 | 57 | 426 | 2.0E-35 |
sp|O43000|LIZ1_SCHPO | Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 | 35 | 260 | 4.0E-35 |
sp|P40445|YIQ6_YEAST | Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 | 1 | 473 | 2.0E-34 |
sp|Q88FY6|NICT_PSEPK | Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 | 38 | 430 | 2.0E-34 |
sp|P25621|FEN2_YEAST | Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 | 43 | 289 | 3.0E-28 |
sp|Q07904|THI73_YEAST | Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 | 19 | 478 | 7.0E-28 |
sp|B5BP49|YP55_SCHPO | Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 | 48 | 517 | 2.0E-26 |
sp|O13880|VHT1_SCHPO | Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 | 48 | 428 | 6.0E-26 |
sp|O94572|YGDF_SCHPO | Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 | 6 | 490 | 8.0E-26 |
sp|P39709|SEO1_YEAST | Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 | 17 | 504 | 2.0E-24 |
sp|P53241|VHT1_YEAST | Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 | 37 | 517 | 1.0E-23 |
sp|O13879|YE1F_SCHPO | Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 | 17 | 429 | 5.0E-21 |
sp|P15365|DAL5_YEAST | Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 | 27 | 289 | 3.0E-19 |
sp|Q05181|PHT1_PSEPU | Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 | 48 | 362 | 1.0E-18 |
sp|Q9C0V8|YHJ1_SCHPO | Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 | 12 | 440 | 4.0E-17 |
sp|Q9C0U9|YQD3_SCHPO | Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 | 21 | 518 | 6.0E-17 |
sp|P0CF20|YO163_YEAST | Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 | 129 | 264 | 2.0E-12 |
sp|P0AA76|DGOT_ECOLI | D-galactonate transporter OS=Escherichia coli (strain K12) GN=dgoT PE=1 SV=1 | 44 | 352 | 2.0E-09 |
sp|P0AA77|DGOT_ECOL6 | D-galactonate transporter OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dgoT PE=3 SV=1 | 44 | 352 | 2.0E-09 |
sp|Q12235|YCT1_YEAST | High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 | 22 | 289 | 2.0E-09 |
sp|Q0K843|SAUU_CUPNH | Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 | 52 | 431 | 5.0E-09 |
sp|P42237|GUDP_BACSU | Probable glucarate transporter OS=Bacillus subtilis (strain 168) GN=gudP PE=3 SV=2 | 40 | 314 | 1.0E-07 |
sp|P39398|LGOT_ECOLI | Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 | 3 | 309 | 2.0E-07 |
sp|P37489|YYBO_BACSU | Uncharacterized transporter YybO OS=Bacillus subtilis (strain 168) GN=yybO PE=3 SV=1 | 55 | 354 | 2.0E-07 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0022857 | transmembrane transporter activity | Yes |
GO:0051179 | localization | No |
GO:0003674 | molecular_function | No |
GO:0051234 | establishment of localization | No |
GO:0008150 | biological_process | No |
GO:0009987 | cellular process | No |
GO:0005215 | transporter activity | No |
GO:0006810 | transport | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 69 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 57 | 74 | 17 |
2 | 94 | 116 | 22 |
3 | 121 | 143 | 22 |
4 | 148 | 170 | 22 |
5 | 183 | 205 | 22 |
6 | 215 | 237 | 22 |
7 | 290 | 312 | 22 |
8 | 322 | 344 | 22 |
9 | 351 | 369 | 18 |
10 | 379 | 401 | 22 |
11 | 410 | 427 | 17 |
12 | 442 | 464 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|092700 MSLEEEKFDSPPRSSQDKDKEAFSEQDDIHKVPLYNPHVDVSGVNEAKLLRKIDWMLIPWLSLLYLASFLDRTAI GNARLYHMQDDLHIDDTQYLLSLTIFFFSYAVFEVPSNIFLKRLRPSLWLSGLMLLWGIAMMAQGLVTDYAGLLG TRWTLGVFEAGLFPGVNYYLSCWYKRSEFGIRAAIFFSAATVSGAFGGLLAAAISNMDGIGGKAAWAWIFILEGL ATVLLGVMSFFIVQDFPDTAKFLTEAERTVVIRRLQTDDQFSAAGEKLRWKYIFQSLLDWKTWVGMMAYTGCDAA LYAFALFLPSIINQVSFKATPANLLTVPVYVFACIVTCTVGFCADRYGNRGYFNMAFFCLGGAGYIILISSRNAA LSYFAVYMATCGIYPVIPNTIAWVSNNVEGSYKRSVTLAMVISFGNINGAVSSNVYRARDAPWYPLGHGLVLMYI GLGLASNIIMFFFLRRENAARERGERDEIIGDGTVFDEKKAQKNGKFATVSDAKREKGDDWSGYRYVL* |
Coding | >AgabiH97|092700 ATGTCCCTCGAAGAAGAAAAGTTCGACTCGCCTCCTCGCTCATCCCAGGATAAGGATAAGGAAGCCTTCTCTGAA CAGGATGACATTCACAAGGTCCCCTTGTATAATCCGCATGTTGATGTTAGTGGGGTAAACGAGGCAAAGTTGCTG AGAAAAATCGACTGGATGTTGATTCCGTGGTTATCATTGCTGTACCTAGCAAGTTTCTTGGATCGAACGGCCATT GGCAATGCCAGGTTATATCACATGCAAGACGACCTACACATAGACGATACTCAGTATCTTCTATCGTTAACGATA TTTTTCTTCAGCTATGCTGTATTCGAGGTCCCTTCGAATATTTTTCTAAAGCGACTCCGGCCATCATTATGGCTC TCCGGTTTGATGTTGCTCTGGGGCATCGCAATGATGGCACAAGGTCTCGTGACAGACTATGCAGGCCTTTTGGGT ACAAGATGGACGCTTGGAGTATTCGAGGCTGGTCTTTTCCCGGGTGTCAACTATTATCTCTCTTGTTGGTACAAG CGCTCCGAGTTTGGTATTCGGGCGGCAATTTTCTTTTCCGCCGCAACAGTTTCTGGCGCTTTTGGTGGTCTGTTG GCGGCTGCCATCTCAAACATGGACGGAATCGGTGGCAAGGCTGCCTGGGCCTGGATTTTCATCCTTGAAGGACTT GCCACCGTTTTGCTCGGTGTAATGTCTTTCTTCATCGTTCAGGACTTCCCAGATACCGCAAAGTTTTTGACGGAA GCAGAACGAACAGTTGTTATCAGGCGTCTTCAAACAGACGATCAATTTAGCGCTGCGGGCGAAAAATTACGCTGG AAATATATCTTCCAGAGTTTACTGGATTGGAAGACTTGGGTCGGCATGATGGCCTATACAGGCTGTGATGCCGCT CTGTACGCCTTTGCCCTCTTCTTACCCAGTATTATCAACCAAGTGAGCTTCAAAGCTACTCCAGCCAATCTCCTC ACAGTCCCAGTTTACGTCTTTGCTTGTATCGTGACTTGTACGGTCGGCTTCTGCGCCGATAGATATGGAAACAGA GGGTACTTCAATATGGCTTTCTTCTGCCTAGGTGGTGCCGGATATATCATTCTAATCTCTTCTCGCAACGCTGCC CTCTCGTACTTCGCTGTCTACATGGCCACTTGTGGTATCTATCCCGTCATTCCGAACACAATTGCCTGGGTGTCG AATAATGTCGAAGGTAGTTACAAGCGAAGTGTTACACTAGCGATGGTTATCAGCTTTGGCAACATCAATGGTGCC GTCAGCTCCAACGTCTACCGTGCGAGAGATGCGCCATGGTATCCACTCGGACATGGCCTCGTCTTAATGTACATT GGGTTAGGACTAGCGTCTAACATTATCATGTTCTTCTTCCTCCGACGCGAAAATGCAGCCCGTGAAAGAGGTGAA AGAGATGAAATCATTGGGGATGGCACTGTTTTCGATGAAAAGAAAGCTCAGAAGAACGGAAAATTCGCGACCGTA TCGGATGCCAAGAGAGAGAAGGGCGATGACTGGAGTGGATACAGATACGTCCTTTAA |
Transcript | >AgabiH97|092700 ATGTCCCTCGAAGAAGAAAAGTTCGACTCGCCTCCTCGCTCATCCCAGGATAAGGATAAGGAAGCCTTCTCTGAA CAGGATGACATTCACAAGGTCCCCTTGTATAATCCGCATGTTGATGTTAGTGGGGTAAACGAGGCAAAGTTGCTG AGAAAAATCGACTGGATGTTGATTCCGTGGTTATCATTGCTGTACCTAGCAAGTTTCTTGGATCGAACGGCCATT GGCAATGCCAGGTTATATCACATGCAAGACGACCTACACATAGACGATACTCAGTATCTTCTATCGTTAACGATA TTTTTCTTCAGCTATGCTGTATTCGAGGTCCCTTCGAATATTTTTCTAAAGCGACTCCGGCCATCATTATGGCTC TCCGGTTTGATGTTGCTCTGGGGCATCGCAATGATGGCACAAGGTCTCGTGACAGACTATGCAGGCCTTTTGGGT ACAAGATGGACGCTTGGAGTATTCGAGGCTGGTCTTTTCCCGGGTGTCAACTATTATCTCTCTTGTTGGTACAAG CGCTCCGAGTTTGGTATTCGGGCGGCAATTTTCTTTTCCGCCGCAACAGTTTCTGGCGCTTTTGGTGGTCTGTTG GCGGCTGCCATCTCAAACATGGACGGAATCGGTGGCAAGGCTGCCTGGGCCTGGATTTTCATCCTTGAAGGACTT GCCACCGTTTTGCTCGGTGTAATGTCTTTCTTCATCGTTCAGGACTTCCCAGATACCGCAAAGTTTTTGACGGAA GCAGAACGAACAGTTGTTATCAGGCGTCTTCAAACAGACGATCAATTTAGCGCTGCGGGCGAAAAATTACGCTGG AAATATATCTTCCAGAGTTTACTGGATTGGAAGACTTGGGTCGGCATGATGGCCTATACAGGCTGTGATGCCGCT CTGTACGCCTTTGCCCTCTTCTTACCCAGTATTATCAACCAAGTGAGCTTCAAAGCTACTCCAGCCAATCTCCTC ACAGTCCCAGTTTACGTCTTTGCTTGTATCGTGACTTGTACGGTCGGCTTCTGCGCCGATAGATATGGAAACAGA GGGTACTTCAATATGGCTTTCTTCTGCCTAGGTGGTGCCGGATATATCATTCTAATCTCTTCTCGCAACGCTGCC CTCTCGTACTTCGCTGTCTACATGGCCACTTGTGGTATCTATCCCGTCATTCCGAACACAATTGCCTGGGTGTCG AATAATGTCGAAGGTAGTTACAAGCGAAGTGTTACACTAGCGATGGTTATCAGCTTTGGCAACATCAATGGTGCC GTCAGCTCCAACGTCTACCGTGCGAGAGATGCGCCATGGTATCCACTCGGACATGGCCTCGTCTTAATGTACATT GGGTTAGGACTAGCGTCTAACATTATCATGTTCTTCTTCCTCCGACGCGAAAATGCAGCCCGTGAAAGAGGTGAA AGAGATGAAATCATTGGGGATGGCACTGTTTTCGATGAAAAGAAAGCTCAGAAGAACGGAAAATTCGCGACCGTA TCGGATGCCAAGAGAGAGAAGGGCGATGACTGGAGTGGATACAGATACGTCCTTTAA |
Gene | >AgabiH97|092700 ATGTCCCTCGAAGAAGAAAAGTTCGACTCGCCTCCTCGCTCATCCCAGGATAAGGATAAGGAAGCCTTCTCTGAA CAGGATGACATTCACAAGGTCCCCTTGTATAATCCGCATGTTGATGTTAGTGGGGTAAACGAGGCAAAGTTGCTG AGAAAAATCGACTGGATGTTGATTCCGTGGTTATCATTGCTGTACCTAGCAAGTTTCTTGGATCGAACGGCCATT GGCAAGTAAGTGGAATGCACACACCTAGCGTCCTCACCTTCTGAACATCATCACAGTGCCAGGGTAGGATACTAT GACGCTCCTAGAGAACACAAGCTCATCCCACTCTCATTAGTTATATCACATGCAAGACGACCTACACATAGACGA TACTCAGTATCTTCTATCGTTAACGGTAATACAATTCAAATAAAGCACACGAATAGCGACTCATAGCTTGCTGCA GATATTTTTCTTCAGCTATGCTGTATTCGAGGTCCCTTCGAATATTTTTCTAAAGCGACTCCGGCCATCATTATG GCTCTCCGGTTTGATGTTGCTCTGGGGCATCGCAATGGTAAGCTCAGGCCAAATTAAATCAATGGTTTCCCGCGT TGATAATGCCATACTTACTATACGCCATTTAGATGGCACAAGGTCTCGTGACAGACTATGCAGGCCTTTTGGGTT GGTACTCTGTGGCTTGTTACATTCTTCCATTAACAACAGGCACTATGTAGGTACAAGATGGACGCTTGGAGTATT CGAGGCTGGTCTTTTCCCGGGTGTCAACTATTATCTCTCTTGGTAAGCCGCGCCAAGGCATTTGAATTCGTAGCT GTACTTACACAATTACAATTCAAAGTTGGTACAAGCGCTCCGAGTTTGGTATTCGGGCGGCAATTTTCTTTTCCG CCGCAACAGTTTCTGGCGCTTTTGGTGGTCTGTTGGCGGTACGGCATACACTTCTTCATTCACACCCTTTCTAAA GGTTCTTCATAGGCTGCCATCTCAAACATGGACGGAATCGGTGGCAAGGCTGCCTGGGCCTGGATTTTCAGTCAG TAGACTTATTATCAATAACTTTCCGCTTACTGAACTTGTATCACCAGTCCTTGAAGGACTTGCCACCGTTTTGCT CGGTGTAATGTCTTTCTTCATCGTTCAGGACTTCCCAGATACCGCAAAGTTTTTGACGGAAGCAGAACGAACAGT TGTTATCAGGCGTCTTCAAACAGACGATCAATTTAGCGCTGCGGGCGAAAAATTACGCTGGAAATATATCTTCCA GAGTTTACTGGATTGGAAGACTTGGGTCGGCAGTGGGTGTCAAGTAGGTAAATTGACTGTCGTGAGCTGAAATGC CTTTTCGATTATAGTGATGGCCTATACAGGCTGTGATGCCGCTCTGTACGCCTTTGCCCTCTTCTTACCCAGTAT TATCAACCAAGTGAGTTTACTACCCACTGTTACCGATTGAATGGTCCTAACTCTTATGAATCAGCTTGGTGAGAT TTTCCAACGTGGGTAAGATAAGAATGGAGAGGTTAACCAGTTCAATAGGCTTCAAAGCTACTCCAGCCAATCTCC TCACAGTCCCAGTTTACGTCTTTGCTTGTATCGTGACTTGTACGGTCGGCTTCTGCGCCGATAGATATGGAAACA GAGGGTACTTCAATATGGCTTTCTTCTGCCTAGGTACGCCACCGCGAACATGATGTAGGATGACGACACTCAGAA GGATATAGGTGGTGCCGGATATATCATTCTAATCTCTTCTCGCAACGCTGCCCTCTCGTACTTCGCTGTCTACAT GGCCACTTGGTGAGTTTAATTCCCCCGATTGTTGAAGAACACTGAGTCTGAACAACGATTAAAGTGGTATCTATC CCGTCATTCGTGAGTCCTGTGCTTTCTTTTTTTTAAGTCTAATTCTCAGGGTTTATGACTCGTTAATAGCGAACA CAATGTGAGTTGTAGTTTTCGCTCCGATGCAACCACCTAAGTTCTCACGCCATTCTAGTGCCTGGGTGTCGAATA ATGTCGAAGGTAGTTACAAGCGAAGTGTTACACTAGCGATGGTTATCAGCTTGTGCGTCATTTCACTTTTTTTTT TTTTTTGAAAATCGGTCTGAACGGTATGACGCAGTGGCAACATCAATGGTGCCGTCAGCTCCAACGTCGTATGTG TCTTTCTTGAATCATCTATGATCAATATGATATGAACATACTTTTCTTAGTACCGTGCGAGAGATGCGCCATGGT ATCCACTCGGACATGGTAAGCTTTCCTGCCATTCGATTTGCTCTCATTTACTCATCATCTCCCCCCGTCTCTCTA TCTTAGGCCTCGTCTTAATGTACATTGGGTTAGGACTAGCGTCTAACATTATCATGTTCTTCTTCCTCCGACGCG AAAATGCAGCCCGTGAAAGAGGTGAAAGAGATGAAATCATTGGGGATGGCACTGTTTTCGATGAAAAGAAAGCTC AGAAGAACGGAAAATTCGCGACCGTATCGGATGCCAAGAGAGAGAAGGGCGATGACTGGAGTGGATACAGATACG TCCTTTAA |