Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|092700
Gene name
Locationscaffold_6:1181385..1183943
Strand+
Gene length (bp)2558
Transcript length (bp)1557
Coding sequence length (bp)1557
Protein length (aa) 519

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 1.0E-27 62 424

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 2 492 5.0E-82
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 14 497 2.0E-80
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 17 482 8.0E-78
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 4 497 3.0E-71
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 46 471 9.0E-57
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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 2 492 5.0E-82
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 14 497 2.0E-80
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 17 482 8.0E-78
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 4 497 3.0E-71
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 46 471 9.0E-57
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 25 350 4.0E-47
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 46 430 3.0E-44
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 48 507 4.0E-36
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 40 502 2.0E-35
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 57 426 2.0E-35
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 35 260 4.0E-35
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 1 473 2.0E-34
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 38 430 2.0E-34
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 43 289 3.0E-28
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 19 478 7.0E-28
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 48 517 2.0E-26
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 48 428 6.0E-26
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 6 490 8.0E-26
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 17 504 2.0E-24
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 37 517 1.0E-23
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 17 429 5.0E-21
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 27 289 3.0E-19
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 48 362 1.0E-18
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 12 440 4.0E-17
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 21 518 6.0E-17
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 129 264 2.0E-12
sp|P0AA76|DGOT_ECOLI D-galactonate transporter OS=Escherichia coli (strain K12) GN=dgoT PE=1 SV=1 44 352 2.0E-09
sp|P0AA77|DGOT_ECOL6 D-galactonate transporter OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dgoT PE=3 SV=1 44 352 2.0E-09
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 22 289 2.0E-09
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 52 431 5.0E-09
sp|P42237|GUDP_BACSU Probable glucarate transporter OS=Bacillus subtilis (strain 168) GN=gudP PE=3 SV=2 40 314 1.0E-07
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 3 309 2.0E-07
sp|P37489|YYBO_BACSU Uncharacterized transporter YybO OS=Bacillus subtilis (strain 168) GN=yybO PE=3 SV=1 55 354 2.0E-07
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005215 transporter activity No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 69 0.5

Transmembrane Domains

Domain # Start End Length
1 57 74 17
2 94 116 22
3 121 143 22
4 148 170 22
5 183 205 22
6 215 237 22
7 290 312 22
8 322 344 22
9 351 369 18
10 379 401 22
11 410 427 17
12 442 464 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|092700
MSLEEEKFDSPPRSSQDKDKEAFSEQDDIHKVPLYNPHVDVSGVNEAKLLRKIDWMLIPWLSLLYLASFLDRTAI
GNARLYHMQDDLHIDDTQYLLSLTIFFFSYAVFEVPSNIFLKRLRPSLWLSGLMLLWGIAMMAQGLVTDYAGLLG
TRWTLGVFEAGLFPGVNYYLSCWYKRSEFGIRAAIFFSAATVSGAFGGLLAAAISNMDGIGGKAAWAWIFILEGL
ATVLLGVMSFFIVQDFPDTAKFLTEAERTVVIRRLQTDDQFSAAGEKLRWKYIFQSLLDWKTWVGMMAYTGCDAA
LYAFALFLPSIINQVSFKATPANLLTVPVYVFACIVTCTVGFCADRYGNRGYFNMAFFCLGGAGYIILISSRNAA
LSYFAVYMATCGIYPVIPNTIAWVSNNVEGSYKRSVTLAMVISFGNINGAVSSNVYRARDAPWYPLGHGLVLMYI
GLGLASNIIMFFFLRRENAARERGERDEIIGDGTVFDEKKAQKNGKFATVSDAKREKGDDWSGYRYVL*
Coding >AgabiH97|092700
ATGTCCCTCGAAGAAGAAAAGTTCGACTCGCCTCCTCGCTCATCCCAGGATAAGGATAAGGAAGCCTTCTCTGAA
CAGGATGACATTCACAAGGTCCCCTTGTATAATCCGCATGTTGATGTTAGTGGGGTAAACGAGGCAAAGTTGCTG
AGAAAAATCGACTGGATGTTGATTCCGTGGTTATCATTGCTGTACCTAGCAAGTTTCTTGGATCGAACGGCCATT
GGCAATGCCAGGTTATATCACATGCAAGACGACCTACACATAGACGATACTCAGTATCTTCTATCGTTAACGATA
TTTTTCTTCAGCTATGCTGTATTCGAGGTCCCTTCGAATATTTTTCTAAAGCGACTCCGGCCATCATTATGGCTC
TCCGGTTTGATGTTGCTCTGGGGCATCGCAATGATGGCACAAGGTCTCGTGACAGACTATGCAGGCCTTTTGGGT
ACAAGATGGACGCTTGGAGTATTCGAGGCTGGTCTTTTCCCGGGTGTCAACTATTATCTCTCTTGTTGGTACAAG
CGCTCCGAGTTTGGTATTCGGGCGGCAATTTTCTTTTCCGCCGCAACAGTTTCTGGCGCTTTTGGTGGTCTGTTG
GCGGCTGCCATCTCAAACATGGACGGAATCGGTGGCAAGGCTGCCTGGGCCTGGATTTTCATCCTTGAAGGACTT
GCCACCGTTTTGCTCGGTGTAATGTCTTTCTTCATCGTTCAGGACTTCCCAGATACCGCAAAGTTTTTGACGGAA
GCAGAACGAACAGTTGTTATCAGGCGTCTTCAAACAGACGATCAATTTAGCGCTGCGGGCGAAAAATTACGCTGG
AAATATATCTTCCAGAGTTTACTGGATTGGAAGACTTGGGTCGGCATGATGGCCTATACAGGCTGTGATGCCGCT
CTGTACGCCTTTGCCCTCTTCTTACCCAGTATTATCAACCAAGTGAGCTTCAAAGCTACTCCAGCCAATCTCCTC
ACAGTCCCAGTTTACGTCTTTGCTTGTATCGTGACTTGTACGGTCGGCTTCTGCGCCGATAGATATGGAAACAGA
GGGTACTTCAATATGGCTTTCTTCTGCCTAGGTGGTGCCGGATATATCATTCTAATCTCTTCTCGCAACGCTGCC
CTCTCGTACTTCGCTGTCTACATGGCCACTTGTGGTATCTATCCCGTCATTCCGAACACAATTGCCTGGGTGTCG
AATAATGTCGAAGGTAGTTACAAGCGAAGTGTTACACTAGCGATGGTTATCAGCTTTGGCAACATCAATGGTGCC
GTCAGCTCCAACGTCTACCGTGCGAGAGATGCGCCATGGTATCCACTCGGACATGGCCTCGTCTTAATGTACATT
GGGTTAGGACTAGCGTCTAACATTATCATGTTCTTCTTCCTCCGACGCGAAAATGCAGCCCGTGAAAGAGGTGAA
AGAGATGAAATCATTGGGGATGGCACTGTTTTCGATGAAAAGAAAGCTCAGAAGAACGGAAAATTCGCGACCGTA
TCGGATGCCAAGAGAGAGAAGGGCGATGACTGGAGTGGATACAGATACGTCCTTTAA
Transcript >AgabiH97|092700
ATGTCCCTCGAAGAAGAAAAGTTCGACTCGCCTCCTCGCTCATCCCAGGATAAGGATAAGGAAGCCTTCTCTGAA
CAGGATGACATTCACAAGGTCCCCTTGTATAATCCGCATGTTGATGTTAGTGGGGTAAACGAGGCAAAGTTGCTG
AGAAAAATCGACTGGATGTTGATTCCGTGGTTATCATTGCTGTACCTAGCAAGTTTCTTGGATCGAACGGCCATT
GGCAATGCCAGGTTATATCACATGCAAGACGACCTACACATAGACGATACTCAGTATCTTCTATCGTTAACGATA
TTTTTCTTCAGCTATGCTGTATTCGAGGTCCCTTCGAATATTTTTCTAAAGCGACTCCGGCCATCATTATGGCTC
TCCGGTTTGATGTTGCTCTGGGGCATCGCAATGATGGCACAAGGTCTCGTGACAGACTATGCAGGCCTTTTGGGT
ACAAGATGGACGCTTGGAGTATTCGAGGCTGGTCTTTTCCCGGGTGTCAACTATTATCTCTCTTGTTGGTACAAG
CGCTCCGAGTTTGGTATTCGGGCGGCAATTTTCTTTTCCGCCGCAACAGTTTCTGGCGCTTTTGGTGGTCTGTTG
GCGGCTGCCATCTCAAACATGGACGGAATCGGTGGCAAGGCTGCCTGGGCCTGGATTTTCATCCTTGAAGGACTT
GCCACCGTTTTGCTCGGTGTAATGTCTTTCTTCATCGTTCAGGACTTCCCAGATACCGCAAAGTTTTTGACGGAA
GCAGAACGAACAGTTGTTATCAGGCGTCTTCAAACAGACGATCAATTTAGCGCTGCGGGCGAAAAATTACGCTGG
AAATATATCTTCCAGAGTTTACTGGATTGGAAGACTTGGGTCGGCATGATGGCCTATACAGGCTGTGATGCCGCT
CTGTACGCCTTTGCCCTCTTCTTACCCAGTATTATCAACCAAGTGAGCTTCAAAGCTACTCCAGCCAATCTCCTC
ACAGTCCCAGTTTACGTCTTTGCTTGTATCGTGACTTGTACGGTCGGCTTCTGCGCCGATAGATATGGAAACAGA
GGGTACTTCAATATGGCTTTCTTCTGCCTAGGTGGTGCCGGATATATCATTCTAATCTCTTCTCGCAACGCTGCC
CTCTCGTACTTCGCTGTCTACATGGCCACTTGTGGTATCTATCCCGTCATTCCGAACACAATTGCCTGGGTGTCG
AATAATGTCGAAGGTAGTTACAAGCGAAGTGTTACACTAGCGATGGTTATCAGCTTTGGCAACATCAATGGTGCC
GTCAGCTCCAACGTCTACCGTGCGAGAGATGCGCCATGGTATCCACTCGGACATGGCCTCGTCTTAATGTACATT
GGGTTAGGACTAGCGTCTAACATTATCATGTTCTTCTTCCTCCGACGCGAAAATGCAGCCCGTGAAAGAGGTGAA
AGAGATGAAATCATTGGGGATGGCACTGTTTTCGATGAAAAGAAAGCTCAGAAGAACGGAAAATTCGCGACCGTA
TCGGATGCCAAGAGAGAGAAGGGCGATGACTGGAGTGGATACAGATACGTCCTTTAA
Gene >AgabiH97|092700
ATGTCCCTCGAAGAAGAAAAGTTCGACTCGCCTCCTCGCTCATCCCAGGATAAGGATAAGGAAGCCTTCTCTGAA
CAGGATGACATTCACAAGGTCCCCTTGTATAATCCGCATGTTGATGTTAGTGGGGTAAACGAGGCAAAGTTGCTG
AGAAAAATCGACTGGATGTTGATTCCGTGGTTATCATTGCTGTACCTAGCAAGTTTCTTGGATCGAACGGCCATT
GGCAAGTAAGTGGAATGCACACACCTAGCGTCCTCACCTTCTGAACATCATCACAGTGCCAGGGTAGGATACTAT
GACGCTCCTAGAGAACACAAGCTCATCCCACTCTCATTAGTTATATCACATGCAAGACGACCTACACATAGACGA
TACTCAGTATCTTCTATCGTTAACGGTAATACAATTCAAATAAAGCACACGAATAGCGACTCATAGCTTGCTGCA
GATATTTTTCTTCAGCTATGCTGTATTCGAGGTCCCTTCGAATATTTTTCTAAAGCGACTCCGGCCATCATTATG
GCTCTCCGGTTTGATGTTGCTCTGGGGCATCGCAATGGTAAGCTCAGGCCAAATTAAATCAATGGTTTCCCGCGT
TGATAATGCCATACTTACTATACGCCATTTAGATGGCACAAGGTCTCGTGACAGACTATGCAGGCCTTTTGGGTT
GGTACTCTGTGGCTTGTTACATTCTTCCATTAACAACAGGCACTATGTAGGTACAAGATGGACGCTTGGAGTATT
CGAGGCTGGTCTTTTCCCGGGTGTCAACTATTATCTCTCTTGGTAAGCCGCGCCAAGGCATTTGAATTCGTAGCT
GTACTTACACAATTACAATTCAAAGTTGGTACAAGCGCTCCGAGTTTGGTATTCGGGCGGCAATTTTCTTTTCCG
CCGCAACAGTTTCTGGCGCTTTTGGTGGTCTGTTGGCGGTACGGCATACACTTCTTCATTCACACCCTTTCTAAA
GGTTCTTCATAGGCTGCCATCTCAAACATGGACGGAATCGGTGGCAAGGCTGCCTGGGCCTGGATTTTCAGTCAG
TAGACTTATTATCAATAACTTTCCGCTTACTGAACTTGTATCACCAGTCCTTGAAGGACTTGCCACCGTTTTGCT
CGGTGTAATGTCTTTCTTCATCGTTCAGGACTTCCCAGATACCGCAAAGTTTTTGACGGAAGCAGAACGAACAGT
TGTTATCAGGCGTCTTCAAACAGACGATCAATTTAGCGCTGCGGGCGAAAAATTACGCTGGAAATATATCTTCCA
GAGTTTACTGGATTGGAAGACTTGGGTCGGCAGTGGGTGTCAAGTAGGTAAATTGACTGTCGTGAGCTGAAATGC
CTTTTCGATTATAGTGATGGCCTATACAGGCTGTGATGCCGCTCTGTACGCCTTTGCCCTCTTCTTACCCAGTAT
TATCAACCAAGTGAGTTTACTACCCACTGTTACCGATTGAATGGTCCTAACTCTTATGAATCAGCTTGGTGAGAT
TTTCCAACGTGGGTAAGATAAGAATGGAGAGGTTAACCAGTTCAATAGGCTTCAAAGCTACTCCAGCCAATCTCC
TCACAGTCCCAGTTTACGTCTTTGCTTGTATCGTGACTTGTACGGTCGGCTTCTGCGCCGATAGATATGGAAACA
GAGGGTACTTCAATATGGCTTTCTTCTGCCTAGGTACGCCACCGCGAACATGATGTAGGATGACGACACTCAGAA
GGATATAGGTGGTGCCGGATATATCATTCTAATCTCTTCTCGCAACGCTGCCCTCTCGTACTTCGCTGTCTACAT
GGCCACTTGGTGAGTTTAATTCCCCCGATTGTTGAAGAACACTGAGTCTGAACAACGATTAAAGTGGTATCTATC
CCGTCATTCGTGAGTCCTGTGCTTTCTTTTTTTTAAGTCTAATTCTCAGGGTTTATGACTCGTTAATAGCGAACA
CAATGTGAGTTGTAGTTTTCGCTCCGATGCAACCACCTAAGTTCTCACGCCATTCTAGTGCCTGGGTGTCGAATA
ATGTCGAAGGTAGTTACAAGCGAAGTGTTACACTAGCGATGGTTATCAGCTTGTGCGTCATTTCACTTTTTTTTT
TTTTTTGAAAATCGGTCTGAACGGTATGACGCAGTGGCAACATCAATGGTGCCGTCAGCTCCAACGTCGTATGTG
TCTTTCTTGAATCATCTATGATCAATATGATATGAACATACTTTTCTTAGTACCGTGCGAGAGATGCGCCATGGT
ATCCACTCGGACATGGTAAGCTTTCCTGCCATTCGATTTGCTCTCATTTACTCATCATCTCCCCCCGTCTCTCTA
TCTTAGGCCTCGTCTTAATGTACATTGGGTTAGGACTAGCGTCTAACATTATCATGTTCTTCTTCCTCCGACGCG
AAAATGCAGCCCGTGAAAGAGGTGAAAGAGATGAAATCATTGGGGATGGCACTGTTTTCGATGAAAAGAAAGCTC
AGAAGAACGGAAAATTCGCGACCGTATCGGATGCCAAGAGAGAGAAGGGCGATGACTGGAGTGGATACAGATACG
TCCTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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