Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|092530
Gene name
Locationscaffold_6:1131618..1133136
Strand-
Gene length (bp)1518
Transcript length (bp)1287
Coding sequence length (bp)1287
Protein length (aa) 429

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|092530
MQLKIALFFSFRLIITVSQLQTSLSSSTITLSTSGESVHLPSSRNAYRNRPYFRLEQIAMSTTPNSLGNCLDYYK
GRTAQIFSEPAAFSRDDIKHQLGPELDLGDVFATTTFTPSDSPVYPPTSRFACDLMSNRTSTTSSSRTITPSSIL
ITPPQTPPDLHPTFSATAPSPLCLGPSLSRIHRENDLEDVCLDEPCDDGNSFGEGNELPELVGPQTSCDTIMNRT
NTTSSGLITPPQTPPGLHATSFGAAPSPLCLGPSLSRTHPEKDLEDICLDEPLDDGSDVDENDELYELITPPMSR
CPGGYHCELMSDRTGTTTSFLITPFQTPLCLGPSLCRTYPENDLEDICLDGSDVSEDDELPELVTPVTPFQTLGP
SLCRTHSEKDLEDICLDESFDDDDDDGNNGDCFFFIPSLTVQENVVDSWTATY*
Coding >AgabiH97|092530
ATGCAGCTAAAAATAGCTTTATTTTTCTCCTTTCGGTTAATAATAACTGTTTCACAGCTCCAGACTTCCTTGTCT
TCTTCCACCATCACACTTTCAACGTCTGGTGAATCAGTACATCTTCCTTCCAGCCGTAACGCATATCGAAACAGG
CCCTACTTTCGCCTAGAACAAATCGCCATGTCGACGACACCGAACTCGCTTGGAAACTGCCTTGATTATTACAAA
GGTCGTACCGCCCAAATCTTCAGTGAACCTGCCGCTTTCAGCCGTGACGATATCAAGCATCAATTGGGACCTGAA
CTAGACCTCGGTGACGTCTTCGCCACCACAACATTTACACCATCCGATTCACCCGTCTACCCACCAACTTCTCGT
TTCGCATGCGATCTCATGAGCAACCGCACAAGCACGACCTCATCTTCTCGTACCATAACACCATCATCTATCCTC
ATCACTCCTCCTCAAACTCCTCCAGATCTTCATCCCACCTTCTCCGCGACAGCACCTTCTCCTCTATGTCTCGGA
CCCTCACTCTCCCGCATTCACCGGGAGAACGACTTGGAGGATGTTTGCTTGGATGAACCCTGTGATGATGGGAAT
AGCTTTGGCGAGGGCAATGAACTTCCTGAACTCGTTGGGCCACAAACGTCTTGCGATACCATCATGAATCGCACA
AACACGACGTCATCTGGCCTCATCACTCCTCCCCAAACTCCTCCAGGTCTTCATGCCACCTCCTTTGGGGCAGCA
CCTTCTCCTCTATGTCTCGGTCCCTCGCTCAGTCGCACTCATCCAGAGAAGGACTTGGAGGATATTTGCTTGGAC
GAGCCTCTCGATGATGGGAGCGACGTTGACGAAAATGATGAACTTTATGAACTCATTACGCCACCGATGTCTCGT
TGCCCAGGCGGATATCATTGCGAGCTTATGAGCGACCGCACAGGCACGACGACATCTTTCCTCATTACTCCTTTT
CAAACACCTCTATGTCTCGGTCCCTCGCTCTGTCGCACCTATCCAGAGAACGACTTGGAGGATATTTGCCTGGAC
GGGAGCGACGTTAGCGAGGACGATGAGCTTCCTGAACTCGTTACGCCAGTTACTCCCTTTCAAACTCTCGGTCCT
TCACTCTGTCGCACCCATTCGGAGAAGGACTTGGAGGATATTTGCCTGGACGAGTCTTTTGATGACGATGATGAT
GATGGGAACAACGGTGATTGTTTCTTTTTCATTCCGTCTTTGACTGTCCAAGAAAATGTCGTCGACTCGTGGACG
GCAACTTATTAA
Transcript >AgabiH97|092530
ATGCAGCTAAAAATAGCTTTATTTTTCTCCTTTCGGTTAATAATAACTGTTTCACAGCTCCAGACTTCCTTGTCT
TCTTCCACCATCACACTTTCAACGTCTGGTGAATCAGTACATCTTCCTTCCAGCCGTAACGCATATCGAAACAGG
CCCTACTTTCGCCTAGAACAAATCGCCATGTCGACGACACCGAACTCGCTTGGAAACTGCCTTGATTATTACAAA
GGTCGTACCGCCCAAATCTTCAGTGAACCTGCCGCTTTCAGCCGTGACGATATCAAGCATCAATTGGGACCTGAA
CTAGACCTCGGTGACGTCTTCGCCACCACAACATTTACACCATCCGATTCACCCGTCTACCCACCAACTTCTCGT
TTCGCATGCGATCTCATGAGCAACCGCACAAGCACGACCTCATCTTCTCGTACCATAACACCATCATCTATCCTC
ATCACTCCTCCTCAAACTCCTCCAGATCTTCATCCCACCTTCTCCGCGACAGCACCTTCTCCTCTATGTCTCGGA
CCCTCACTCTCCCGCATTCACCGGGAGAACGACTTGGAGGATGTTTGCTTGGATGAACCCTGTGATGATGGGAAT
AGCTTTGGCGAGGGCAATGAACTTCCTGAACTCGTTGGGCCACAAACGTCTTGCGATACCATCATGAATCGCACA
AACACGACGTCATCTGGCCTCATCACTCCTCCCCAAACTCCTCCAGGTCTTCATGCCACCTCCTTTGGGGCAGCA
CCTTCTCCTCTATGTCTCGGTCCCTCGCTCAGTCGCACTCATCCAGAGAAGGACTTGGAGGATATTTGCTTGGAC
GAGCCTCTCGATGATGGGAGCGACGTTGACGAAAATGATGAACTTTATGAACTCATTACGCCACCGATGTCTCGT
TGCCCAGGCGGATATCATTGCGAGCTTATGAGCGACCGCACAGGCACGACGACATCTTTCCTCATTACTCCTTTT
CAAACACCTCTATGTCTCGGTCCCTCGCTCTGTCGCACCTATCCAGAGAACGACTTGGAGGATATTTGCCTGGAC
GGGAGCGACGTTAGCGAGGACGATGAGCTTCCTGAACTCGTTACGCCAGTTACTCCCTTTCAAACTCTCGGTCCT
TCACTCTGTCGCACCCATTCGGAGAAGGACTTGGAGGATATTTGCCTGGACGAGTCTTTTGATGACGATGATGAT
GATGGGAACAACGGTGATTGTTTCTTTTTCATTCCGTCTTTGACTGTCCAAGAAAATGTCGTCGACTCGTGGACG
GCAACTTATTAA
Gene >AgabiH97|092530
ATGCAGCTAAAAATAGCTTTATTTTTCTCCTTTCGGTTAATAATAGTATGAATCCCAGCCCTCTAACCGTTTCTC
CTAAAAGTCCTTCCAGACTGTTTCACAGCTCCAGACTTCCTTGTCTTCTTCCACCATCACACTTTCAACGTCTGG
TGGTTAGTCCCTTCCTTCCTATCGTCACGATAGCGAAATAACTCGTGTGGAAACCTTAGAATCAGTACATCTTCC
TTCCAGCCGTAACGCATATCGAAACAGGCCCTACTTTCGCCTAGAACAAATCGCCATGTCGACGACACCGAACTC
GCTTGGAAACTGCCTTGATTATTACAAAGGTCGTACCGCCCAAATCTTCAGTGAACCTGCCGCTTTCAGCCGTGA
CGATATCAAGCATCAATTGGGACCTGAACTAGACCTCGGTGACGTCTTCGCCACCACAACATTTACACCATCCGA
TTCACCCGTCTACCCACCAACTTCTCGTTTCGCATGCGATCTCATGAGCAACCGCACAAGCACGACCTCATCTTC
TCGTACCATAACACCATCATCTATCCTCATCACTCCTCCTCAAACTCCTCCAGATCTTCATCCCACCTTCTCCGC
GACAGCACCTTCTCCTCTATGTCTCGGACCCTCACTCTCCCGCATTCACCGGGAGAACGACTTGGAGGATGTTTG
CTTGGATGAACCCTGTGATGATGGGAATAGCTTTGGCGAGGGCAATGAACTTCCTGAACTCGTTGGGCCACAAAC
GTCTTGCGATACCATCATGAATCGCACAAACACGACGTCATCTGGCCTCATCACTCCTCCCCAAACTCCTCCAGG
TCTTCATGCCACCTCCTTTGGGGCAGCACCTTCTCCTCTATGTCTCGGTCCCTCGCTCAGTCGCACTCATCCAGA
GAAGGACTTGGAGGATATTTGCTTGGACGAGCCTCTCGATGATGGGAGCGACGTTGACGAAAATGATGAACTTTA
TGAACTCATTACGCCACCGATGTCTCGTTGCCCAGGCGGATATCATTGCGAGCTTATGAGCGACCGCACAGGCAC
GACGACATCTTTCCTCATTACTCCTTTTCAAACACCTCTATGTCTCGGTCCCTCGCTCTGTCGCACCTATCCAGA
GAACGACTTGGAGGATATTTGCCTGGACGGGAGCGACGTTAGCGAGGACGATGAGCTTCCTGAACTCGTTACGCC
AGTTACTCCCTTTCAAACTCTCGGTCCTTCACTCTGTCGCACCCATTCGGAGAAGGACTTGGAGGATATTTGCCT
GGACGAGTCTTTTGATGACGATGATGATGATGGGAACAACGGTGACGAAGATGATGAGCACTTGAACGCATTACT
TCTATATCAGAAGTGCGCGTTCTCCCGTTATGATTTCTGAGGTGATTGTTTCTTTTTCATTCCGTCTTTGACTGT
CCAAGGTATGTTGTATTATCCTCTGAAACAGTATTCATTCTAATAATATTTCTCTTAGAAAATGTCGTCGACTCG
TGGACGGCAACTTATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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