Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|092380
Gene name
Location	scaffold_6:1083441..1085428
Strand	+
Gene length (bp)	1987
Transcript length (bp)	1248
Coding sequence length (bp)	1248
Protein length (aa)	416

Overview

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00704	Glyco_hydro_18	Glycosyl hydrolases family 18	1.5E-13	193	379

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005975	carbohydrate metabolic process	Yes
GO:0008152	metabolic process	No
GO:0008150	biological_process	No
GO:0071704	organic substance metabolic process	No
GO:0044238	primary metabolic process	No

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Extracellular	Signal peptide	0.1449	0.0729	0.9508	0.068	0.0671	0.0277	0.1407	0.1524	0.1441	0.007

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category	E-value	Start	End
GH18	2.4E-22	174	389

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID	1
Orthogroup	548
Change Orthofinder run

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39\|380900
Agaricus bisporus var bisporus H39	AgabiH39\|381000
Agaricus bisporus var bisporus H97	AgabiH97\|092370
Agaricus bisporus var bisporus H97	AgabiH97\|092380 (this protein)
Rhodonia placenta FPRL280	RhoplFPRL280\|249_6

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|092380 MSWESESHGICSLRPHYLEKCTILLLRMILWAADARLIFCQPRNMNSPNSFGIYTITRTLHSQNVPKCLNGPPPL PRSLKSIIPTKMFGYTRIAALLTGLSSLLAVAALPLESFNLTDTAKHFLTERAKNAVPGAPRFVVYGDRFVSGIT GPPPVNDVRGFNVFALSFLLTSGPADKAIEWTWLTDAERSNILTQYHNAGIQIIVSAFGATDAPTSTGRDPIATA NTMANFVRDFRLDGIDVDYEDFNAFNAGNGSAEQWLISFTRQLRQQLPSGAILTHAPVAPWFSASRFPAGGYLAI HRSVGNLIDWYNVQFYNQGTSEYTTCNNLLNTSSGTWPNSAVFQIAASGVPLSKIVIGKPATSGDASNGFMSTST LAQCAQQARNQGWNGGVMVWQYPNANANWIRDVRSLAFPV*
Coding	>AgabiH97\|092380 ATGTCATGGGAATCGGAAAGCCACGGCATCTGCAGTCTTCGTCCTCACTATCTGGAGAAATGTACCATATTGCTG CTCAGAATGATTTTATGGGCCGCGGATGCACGCCTCATTTTCTGTCAGCCAAGAAACATGAACTCTCCGAATTCC TTCGGCATCTACACGATAACAAGGACATTGCACTCTCAAAATGTTCCCAAGTGTTTGAATGGTCCACCACCCCTT CCTCGGTCTCTGAAGTCAATTATACCGACAAAGATGTTTGGATACACTCGCATCGCTGCTCTTCTTACTGGTCTC TCTAGCCTACTGGCTGTGGCTGCTTTGCCCCTTGAATCCTTCAACCTCACTGATACGGCAAAACACTTCCTCACC GAACGTGCCAAGAACGCCGTCCCAGGGGCACCACGCTTCGTCGTCTATGGTGATAGATTCGTCTCAGGTATCACT GGACCACCGCCAGTTAACGATGTTCGGGGTTTCAACGTTTTTGCCCTTTCTTTCCTCTTGACTTCAGGACCCGCT GATAAAGCTATTGAATGGACTTGGCTCACGGACGCCGAACGTTCTAATATCTTAACTCAGTACCATAACGCCGGC ATTCAAATTATCGTATCGGCTTTCGGTGCTACGGATGCTCCCACTTCAACTGGTAGAGATCCAATCGCCACCGCA AATACAATGGCCAACTTTGTCAGGGACTTCCGGCTAGACGGTATTGATGTCGACTACGAGGACTTCAACGCATTC AACGCTGGAAATGGATCGGCTGAGCAATGGCTCATTAGCTTCACCAGACAACTTCGACAACAACTGCCTTCAGGC GCTATTCTTACTCATGCCCCTGTCGCTCCATGGTTTTCGGCAAGCAGATTCCCTGCAGGTGGATATCTCGCCATC CACCGAAGTGTTGGAAACTTGATCGACTGGTACAATGTTCAATTCTATAACCAGGGCACCAGTGAATACACCACC TGCAACAACCTTCTTAACACATCTTCTGGTACCTGGCCTAACTCCGCTGTTTTCCAAATCGCGGCCAGTGGTGTT CCTCTCTCAAAGATTGTCATCGGAAAACCCGCCACCTCAGGCGATGCCAGTAACGGATTCATGTCGACCTCAACT TTGGCTCAGTGCGCGCAGCAGGCAAGGAACCAAGGCTGGAATGGTGGTGTTATGGTTTGGCAATACCCTAATGCA AACGCTAATTGGATTCGGGATGTCCGCTCGCTCGCATTCCCCGTGTAA
Transcript	>AgabiH97\|092380 ATGTCATGGGAATCGGAAAGCCACGGCATCTGCAGTCTTCGTCCTCACTATCTGGAGAAATGTACCATATTGCTG CTCAGAATGATTTTATGGGCCGCGGATGCACGCCTCATTTTCTGTCAGCCAAGAAACATGAACTCTCCGAATTCC TTCGGCATCTACACGATAACAAGGACATTGCACTCTCAAAATGTTCCCAAGTGTTTGAATGGTCCACCACCCCTT CCTCGGTCTCTGAAGTCAATTATACCGACAAAGATGTTTGGATACACTCGCATCGCTGCTCTTCTTACTGGTCTC TCTAGCCTACTGGCTGTGGCTGCTTTGCCCCTTGAATCCTTCAACCTCACTGATACGGCAAAACACTTCCTCACC GAACGTGCCAAGAACGCCGTCCCAGGGGCACCACGCTTCGTCGTCTATGGTGATAGATTCGTCTCAGGTATCACT GGACCACCGCCAGTTAACGATGTTCGGGGTTTCAACGTTTTTGCCCTTTCTTTCCTCTTGACTTCAGGACCCGCT GATAAAGCTATTGAATGGACTTGGCTCACGGACGCCGAACGTTCTAATATCTTAACTCAGTACCATAACGCCGGC ATTCAAATTATCGTATCGGCTTTCGGTGCTACGGATGCTCCCACTTCAACTGGTAGAGATCCAATCGCCACCGCA AATACAATGGCCAACTTTGTCAGGGACTTCCGGCTAGACGGTATTGATGTCGACTACGAGGACTTCAACGCATTC AACGCTGGAAATGGATCGGCTGAGCAATGGCTCATTAGCTTCACCAGACAACTTCGACAACAACTGCCTTCAGGC GCTATTCTTACTCATGCCCCTGTCGCTCCATGGTTTTCGGCAAGCAGATTCCCTGCAGGTGGATATCTCGCCATC CACCGAAGTGTTGGAAACTTGATCGACTGGTACAATGTTCAATTCTATAACCAGGGCACCAGTGAATACACCACC TGCAACAACCTTCTTAACACATCTTCTGGTACCTGGCCTAACTCCGCTGTTTTCCAAATCGCGGCCAGTGGTGTT CCTCTCTCAAAGATTGTCATCGGAAAACCCGCCACCTCAGGCGATGCCAGTAACGGATTCATGTCGACCTCAACT TTGGCTCAGTGCGCGCAGCAGGCAAGGAACCAAGGCTGGAATGGTGGTGTTATGGTTTGGCAATACCCTAATGCA AACGCTAATTGGATTCGGGATGTCCGCTCGCTCGCATTCCCCGTGTAA
Gene	>AgabiH97\|092380 ATGTCATGGGAATCGGAAAGCCACGGCATCTGCAGTGTGAGCTTTTTGGCTCTCATTTCGAATCTCTCACTCATG GCCCAATATCTCTTCCATATGATGTTCCGCGTGCTCTAGCTTCGTCCTCACTATCTGGAGAAATGTACCATATTG CTGCTCAGAATGATTTTATGGGCCGCGGATGCACGCCTCATTTTCTGTCAGCCAAGAAACATGAACTCTCCGAAT TCCTTCGGCATCTACACGATAACAAGGTTTTCTGGGTCACTTGCCATATGGTTGATGCAAGTTTGCCTTATTCTC GACTTTTAGGACATTGCACTCTCAAAATGTTCCCAAGTGTTTGAATGGTACTTTGGGAGGTATTTAAATGCGACC AAGAGCGACATAATGAGCTTCAAGGTCCACCACCCCTTCCTCGGTCTCTGAAGTCAATTATACCGACAAAGATGT TTGGATACACTCGCATCGCTGCTCTTCTTACTGGTCTCTCTAGCCTACTGGCTGTGGCTGCTTTGCCCCTTGAAT CCTTCAACCTCACTGATACGGCAAAACACTTCCTCACCGAACGTGCCAAGAACGCCGTCCCAGGGGCACCACGCT TCGTCGTCTATGGTGATAGATTCGTCTCAGGTATCACTGGACCACCGCCAGTTAACGATGTTCGGGTAAATGCAT TCATCTTTCGACGTGAACTCATATGCTAATCGTCCTTAACCGTAATGCAGGGTTTCAACGTTTTGTCTGTCCATG TTTTCAATCTTTATGAATATTACTAAAGCGTTTTCAGTGCCCTTTCTTTCCTCTTGACTTCAGGACCCGCTGATA AAGTACGATCCGATCAATTTACCACCTAAAAATCTAATTCTAACCCTCGCGTTTGTTTCCAGGCTATTGAATGGA CTTGGCTCACGGACGCCGAACGTTCTAATATCTTAACTCAGTACCATAACGCCGGCATTCAAATTATCGTATCGG CTTTCGGTGCTACGGATGCTCCCACTTCAACTGGTAGAGATCCAATCGCCACCGCAAATACAATGGCCAACTTTG TCAGGGACTTCCGGCTAGACGGTATTGATGTCGACTACGAGGTAAAGCTACACTATACTCGGATCATATGATATA TAACTGGAAGATTTAGGACTTCAACGCATTCAACGCTGGAAATGGATCGGCTGAGGTGACTTTCTCCCCCCCTAT TAACAAATACATTTTTGACATGTTCCCGTAGCAATGGCTCATTAGCTTCACCAGACAACTTCGACAACAACTGCC TTCAGGCGCTATTCTTACTCATGCCCGTGAGTTTTGATTCACCTTCTATGCAACTATATTTGGCTAAGTTCGCCT CAGCTGTCGCTCCATGGTACAGTTTATATTTGATTGATGTGGTTTATCACCTCTTGAAATTAAAACTAGGTTTTC GGCAAGCAGATTCCCTGCAGGTGGATATCTCGCCATCCACCGAAGTGTTGGAAACTTGATCGACTGGTACAATGT TCAAGTAAGTTTACCTTTGGCCTCGTATGTTCACATCCAACTCACGGGTATCTGTCGCGTAGTTCTATAACCGTA AGCAAAAAATATATATATACCGAAATTATTCTCAATGTTCACATGACTTTTAGAGGGCACCAGTGAATACACCAC CTGCAACAACCTTCTTAACACATCTTCTGGTACCTGGCCTAACTCCGCTGTTTTCCAAATCGCGGCCAGTGGTGT TCCTCTCTCAAAGATTGTCATCGGAAAACCCGCCACCTCAGGCGATGCCAGTAACGGATTCATGTCGACCTCAAC TTTGGCTCAGTGCGCGCAGCAGGCAAGGAACCAAGGCTGGAGTACGTATCTATATTGTTGCATTACCTTTGGAGT GTGCACTGACCATGAGAATGTACGATTAGATGGTGGTGTTATGGTTTGGCAATACCCTAATGCAAACGCTAATTG GATTCGGGATGTCCGCTCGCTCGCATTCCCCGTGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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