Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|092380
Gene name
Locationscaffold_6:1083441..1085428
Strand+
Gene length (bp)1987
Transcript length (bp)1248
Coding sequence length (bp)1248
Protein length (aa) 416

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00704 Glyco_hydro_18 Glycosyl hydrolases family 18 1.5E-13 193 379

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1449 0.0729 0.9508 0.068 0.0671 0.0277 0.1407 0.1524 0.1441 0.007

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
GH18 2.4E-22 174 389

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup548
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|380900
Agaricus bisporus var bisporus H39 AgabiH39|381000
Agaricus bisporus var bisporus H97 AgabiH97|092370
Agaricus bisporus var bisporus H97 AgabiH97|092380 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|249_6

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|092380
MSWESESHGICSLRPHYLEKCTILLLRMILWAADARLIFCQPRNMNSPNSFGIYTITRTLHSQNVPKCLNGPPPL
PRSLKSIIPTKMFGYTRIAALLTGLSSLLAVAALPLESFNLTDTAKHFLTERAKNAVPGAPRFVVYGDRFVSGIT
GPPPVNDVRGFNVFALSFLLTSGPADKAIEWTWLTDAERSNILTQYHNAGIQIIVSAFGATDAPTSTGRDPIATA
NTMANFVRDFRLDGIDVDYEDFNAFNAGNGSAEQWLISFTRQLRQQLPSGAILTHAPVAPWFSASRFPAGGYLAI
HRSVGNLIDWYNVQFYNQGTSEYTTCNNLLNTSSGTWPNSAVFQIAASGVPLSKIVIGKPATSGDASNGFMSTST
LAQCAQQARNQGWNGGVMVWQYPNANANWIRDVRSLAFPV*
Coding >AgabiH97|092380
ATGTCATGGGAATCGGAAAGCCACGGCATCTGCAGTCTTCGTCCTCACTATCTGGAGAAATGTACCATATTGCTG
CTCAGAATGATTTTATGGGCCGCGGATGCACGCCTCATTTTCTGTCAGCCAAGAAACATGAACTCTCCGAATTCC
TTCGGCATCTACACGATAACAAGGACATTGCACTCTCAAAATGTTCCCAAGTGTTTGAATGGTCCACCACCCCTT
CCTCGGTCTCTGAAGTCAATTATACCGACAAAGATGTTTGGATACACTCGCATCGCTGCTCTTCTTACTGGTCTC
TCTAGCCTACTGGCTGTGGCTGCTTTGCCCCTTGAATCCTTCAACCTCACTGATACGGCAAAACACTTCCTCACC
GAACGTGCCAAGAACGCCGTCCCAGGGGCACCACGCTTCGTCGTCTATGGTGATAGATTCGTCTCAGGTATCACT
GGACCACCGCCAGTTAACGATGTTCGGGGTTTCAACGTTTTTGCCCTTTCTTTCCTCTTGACTTCAGGACCCGCT
GATAAAGCTATTGAATGGACTTGGCTCACGGACGCCGAACGTTCTAATATCTTAACTCAGTACCATAACGCCGGC
ATTCAAATTATCGTATCGGCTTTCGGTGCTACGGATGCTCCCACTTCAACTGGTAGAGATCCAATCGCCACCGCA
AATACAATGGCCAACTTTGTCAGGGACTTCCGGCTAGACGGTATTGATGTCGACTACGAGGACTTCAACGCATTC
AACGCTGGAAATGGATCGGCTGAGCAATGGCTCATTAGCTTCACCAGACAACTTCGACAACAACTGCCTTCAGGC
GCTATTCTTACTCATGCCCCTGTCGCTCCATGGTTTTCGGCAAGCAGATTCCCTGCAGGTGGATATCTCGCCATC
CACCGAAGTGTTGGAAACTTGATCGACTGGTACAATGTTCAATTCTATAACCAGGGCACCAGTGAATACACCACC
TGCAACAACCTTCTTAACACATCTTCTGGTACCTGGCCTAACTCCGCTGTTTTCCAAATCGCGGCCAGTGGTGTT
CCTCTCTCAAAGATTGTCATCGGAAAACCCGCCACCTCAGGCGATGCCAGTAACGGATTCATGTCGACCTCAACT
TTGGCTCAGTGCGCGCAGCAGGCAAGGAACCAAGGCTGGAATGGTGGTGTTATGGTTTGGCAATACCCTAATGCA
AACGCTAATTGGATTCGGGATGTCCGCTCGCTCGCATTCCCCGTGTAA
Transcript >AgabiH97|092380
ATGTCATGGGAATCGGAAAGCCACGGCATCTGCAGTCTTCGTCCTCACTATCTGGAGAAATGTACCATATTGCTG
CTCAGAATGATTTTATGGGCCGCGGATGCACGCCTCATTTTCTGTCAGCCAAGAAACATGAACTCTCCGAATTCC
TTCGGCATCTACACGATAACAAGGACATTGCACTCTCAAAATGTTCCCAAGTGTTTGAATGGTCCACCACCCCTT
CCTCGGTCTCTGAAGTCAATTATACCGACAAAGATGTTTGGATACACTCGCATCGCTGCTCTTCTTACTGGTCTC
TCTAGCCTACTGGCTGTGGCTGCTTTGCCCCTTGAATCCTTCAACCTCACTGATACGGCAAAACACTTCCTCACC
GAACGTGCCAAGAACGCCGTCCCAGGGGCACCACGCTTCGTCGTCTATGGTGATAGATTCGTCTCAGGTATCACT
GGACCACCGCCAGTTAACGATGTTCGGGGTTTCAACGTTTTTGCCCTTTCTTTCCTCTTGACTTCAGGACCCGCT
GATAAAGCTATTGAATGGACTTGGCTCACGGACGCCGAACGTTCTAATATCTTAACTCAGTACCATAACGCCGGC
ATTCAAATTATCGTATCGGCTTTCGGTGCTACGGATGCTCCCACTTCAACTGGTAGAGATCCAATCGCCACCGCA
AATACAATGGCCAACTTTGTCAGGGACTTCCGGCTAGACGGTATTGATGTCGACTACGAGGACTTCAACGCATTC
AACGCTGGAAATGGATCGGCTGAGCAATGGCTCATTAGCTTCACCAGACAACTTCGACAACAACTGCCTTCAGGC
GCTATTCTTACTCATGCCCCTGTCGCTCCATGGTTTTCGGCAAGCAGATTCCCTGCAGGTGGATATCTCGCCATC
CACCGAAGTGTTGGAAACTTGATCGACTGGTACAATGTTCAATTCTATAACCAGGGCACCAGTGAATACACCACC
TGCAACAACCTTCTTAACACATCTTCTGGTACCTGGCCTAACTCCGCTGTTTTCCAAATCGCGGCCAGTGGTGTT
CCTCTCTCAAAGATTGTCATCGGAAAACCCGCCACCTCAGGCGATGCCAGTAACGGATTCATGTCGACCTCAACT
TTGGCTCAGTGCGCGCAGCAGGCAAGGAACCAAGGCTGGAATGGTGGTGTTATGGTTTGGCAATACCCTAATGCA
AACGCTAATTGGATTCGGGATGTCCGCTCGCTCGCATTCCCCGTGTAA
Gene >AgabiH97|092380
ATGTCATGGGAATCGGAAAGCCACGGCATCTGCAGTGTGAGCTTTTTGGCTCTCATTTCGAATCTCTCACTCATG
GCCCAATATCTCTTCCATATGATGTTCCGCGTGCTCTAGCTTCGTCCTCACTATCTGGAGAAATGTACCATATTG
CTGCTCAGAATGATTTTATGGGCCGCGGATGCACGCCTCATTTTCTGTCAGCCAAGAAACATGAACTCTCCGAAT
TCCTTCGGCATCTACACGATAACAAGGTTTTCTGGGTCACTTGCCATATGGTTGATGCAAGTTTGCCTTATTCTC
GACTTTTAGGACATTGCACTCTCAAAATGTTCCCAAGTGTTTGAATGGTACTTTGGGAGGTATTTAAATGCGACC
AAGAGCGACATAATGAGCTTCAAGGTCCACCACCCCTTCCTCGGTCTCTGAAGTCAATTATACCGACAAAGATGT
TTGGATACACTCGCATCGCTGCTCTTCTTACTGGTCTCTCTAGCCTACTGGCTGTGGCTGCTTTGCCCCTTGAAT
CCTTCAACCTCACTGATACGGCAAAACACTTCCTCACCGAACGTGCCAAGAACGCCGTCCCAGGGGCACCACGCT
TCGTCGTCTATGGTGATAGATTCGTCTCAGGTATCACTGGACCACCGCCAGTTAACGATGTTCGGGTAAATGCAT
TCATCTTTCGACGTGAACTCATATGCTAATCGTCCTTAACCGTAATGCAGGGTTTCAACGTTTTGTCTGTCCATG
TTTTCAATCTTTATGAATATTACTAAAGCGTTTTCAGTGCCCTTTCTTTCCTCTTGACTTCAGGACCCGCTGATA
AAGTACGATCCGATCAATTTACCACCTAAAAATCTAATTCTAACCCTCGCGTTTGTTTCCAGGCTATTGAATGGA
CTTGGCTCACGGACGCCGAACGTTCTAATATCTTAACTCAGTACCATAACGCCGGCATTCAAATTATCGTATCGG
CTTTCGGTGCTACGGATGCTCCCACTTCAACTGGTAGAGATCCAATCGCCACCGCAAATACAATGGCCAACTTTG
TCAGGGACTTCCGGCTAGACGGTATTGATGTCGACTACGAGGTAAAGCTACACTATACTCGGATCATATGATATA
TAACTGGAAGATTTAGGACTTCAACGCATTCAACGCTGGAAATGGATCGGCTGAGGTGACTTTCTCCCCCCCTAT
TAACAAATACATTTTTGACATGTTCCCGTAGCAATGGCTCATTAGCTTCACCAGACAACTTCGACAACAACTGCC
TTCAGGCGCTATTCTTACTCATGCCCGTGAGTTTTGATTCACCTTCTATGCAACTATATTTGGCTAAGTTCGCCT
CAGCTGTCGCTCCATGGTACAGTTTATATTTGATTGATGTGGTTTATCACCTCTTGAAATTAAAACTAGGTTTTC
GGCAAGCAGATTCCCTGCAGGTGGATATCTCGCCATCCACCGAAGTGTTGGAAACTTGATCGACTGGTACAATGT
TCAAGTAAGTTTACCTTTGGCCTCGTATGTTCACATCCAACTCACGGGTATCTGTCGCGTAGTTCTATAACCGTA
AGCAAAAAATATATATATACCGAAATTATTCTCAATGTTCACATGACTTTTAGAGGGCACCAGTGAATACACCAC
CTGCAACAACCTTCTTAACACATCTTCTGGTACCTGGCCTAACTCCGCTGTTTTCCAAATCGCGGCCAGTGGTGT
TCCTCTCTCAAAGATTGTCATCGGAAAACCCGCCACCTCAGGCGATGCCAGTAACGGATTCATGTCGACCTCAAC
TTTGGCTCAGTGCGCGCAGCAGGCAAGGAACCAAGGCTGGAGTACGTATCTATATTGTTGCATTACCTTTGGAGT
GTGCACTGACCATGAGAATGTACGATTAGATGGTGGTGTTATGGTTTGGCAATACCCTAATGCAAACGCTAATTG
GATTCGGGATGTCCGCTCGCTCGCATTCCCCGTGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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