Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|092370
Gene name
Locationscaffold_6:1081633..1083086
Strand+
Gene length (bp)1453
Transcript length (bp)855
Coding sequence length (bp)855
Protein length (aa) 285

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00704 Glyco_hydro_18 Glycosyl hydrolases family 18 2.1E-11 14 177

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|092370
MWQPKIIHQYTAAGIKLIASAFGSTDVPTTINADPVAAANTFAAWVEQYGLDGIDVDYEDFIAFKIGNENAEYWL
IIFTKQLRKQLHQGSYVLIHAPVTPCGGGYLKVHQGVGNLIDWYNVQFYNQDPGVNEYTACNNLLTASSSTWPKT
SVFEIAASVVPLSKIVIGKPATASDAGSGFISTSVLRAAGKKPRMERWYYDLAVPPSRLSLDYFYMLDREEVSGG
IQSVFRDSRFVLSTEQSLKFPTRDPTIGAQFAISGDAHRVALFQKQAARLTSFNYFRSK*
Coding >AgabiH97|092370
ATGTGGCAGCCCAAAATTATTCACCAATACACTGCAGCTGGTATCAAACTCATCGCCTCGGCTTTCGGGTCCACG
GACGTTCCTACTACCATCAATGCTGACCCTGTGGCCGCTGCAAACACTTTTGCGGCCTGGGTCGAACAGTATGGC
CTGGATGGCATTGATGTAGATTACGAAGATTTCATCGCGTTTAAAATCGGAAACGAAAATGCGGAGTATTGGTTG
ATTATCTTCACCAAGCAGCTCCGCAAGCAGTTGCATCAAGGAAGTTATGTCCTAATTCATGCTCCCGTTACACCA
TGCGGAGGAGGTTATCTCAAGGTTCACCAAGGTGTCGGCAATCTTATCGATTGGTACAATGTCCAATTCTACAAC
CAGGATCCAGGTGTCAACGAGTACACCGCTTGTAATAACCTTCTAACAGCTTCGTCAAGTACCTGGCCCAAAACT
TCTGTGTTCGAGATTGCCGCAAGTGTCGTCCCACTCAGTAAGATTGTCATCGGAAAACCAGCCACAGCTAGTGAC
GCCGGAAGCGGGTTCATTTCAACTTCGGTTTTGCGCGCAGCAGGCAAAAAACCAAGGATGGAACGGTGGTATTAT
GACCTGGCAGTACCCCCAAGCCGCCTCTCCTTGGATTACTTCTACATGTTGGATCGAGAAGAAGTTTCTGGTGGC
ATCCAATCCGTATTTCGCGATAGTCGATTTGTCCTATCCACAGAACAGAGTTTGAAGTTTCCCACACGCGATCCT
ACGATCGGAGCTCAATTCGCCATATCGGGGGATGCGCATCGCGTGGCTCTGTTCCAAAAACAGGCCGCTCGGCTG
ACATCGTTCAATTATTTCCGCTCGAAATGA
Transcript >AgabiH97|092370
ATGTGGCAGCCCAAAATTATTCACCAATACACTGCAGCTGGTATCAAACTCATCGCCTCGGCTTTCGGGTCCACG
GACGTTCCTACTACCATCAATGCTGACCCTGTGGCCGCTGCAAACACTTTTGCGGCCTGGGTCGAACAGTATGGC
CTGGATGGCATTGATGTAGATTACGAAGATTTCATCGCGTTTAAAATCGGAAACGAAAATGCGGAGTATTGGTTG
ATTATCTTCACCAAGCAGCTCCGCAAGCAGTTGCATCAAGGAAGTTATGTCCTAATTCATGCTCCCGTTACACCA
TGCGGAGGAGGTTATCTCAAGGTTCACCAAGGTGTCGGCAATCTTATCGATTGGTACAATGTCCAATTCTACAAC
CAGGATCCAGGTGTCAACGAGTACACCGCTTGTAATAACCTTCTAACAGCTTCGTCAAGTACCTGGCCCAAAACT
TCTGTGTTCGAGATTGCCGCAAGTGTCGTCCCACTCAGTAAGATTGTCATCGGAAAACCAGCCACAGCTAGTGAC
GCCGGAAGCGGGTTCATTTCAACTTCGGTTTTGCGCGCAGCAGGCAAAAAACCAAGGATGGAACGGTGGTATTAT
GACCTGGCAGTACCCCCAAGCCGCCTCTCCTTGGATTACTTCTACATGTTGGATCGAGAAGAAGTTTCTGGTGGC
ATCCAATCCGTATTTCGCGATAGTCGATTTGTCCTATCCACAGAACAGAGTTTGAAGTTTCCCACACGCGATCCT
ACGATCGGAGCTCAATTCGCCATATCGGGGGATGCGCATCGCGTGGCTCTGTTCCAAAAACAGGCCGCTCGGCTG
ACATCGTTCAATTATTTCCGCTCGAAATGA
Gene >AgabiH97|092370
ATGTGGCAGCCCAAAATTATTCAGTGACAGCGGAGTCATCACCTCGTCATAGGCTTACGACTGGACTACGCTCAC
AAATCCTCAACGTTCAAACACTAAAAGCCAATACACTGCAGCTGGTATCAAACTCATCGCCTCGGCTTTCGGGTC
CACGGACGTTCCTACTACCATCAATGCTGACCCTGTGGCCGCTGCAAACACTTTTGCGGCCTGGGTCGAACAGTA
TGGCCTGGATGGCATTGATGTAGATTACGAAGATTTCATCGCGTTTAAAATCGGAAACGAAAATGCGGAGGTATG
TCGATACGCCAACCTTTGATGCTATTCTGACAAAACTGGATTTAGTATTGGTTGATTATCTTCACCAAGCAGCTC
CGCAAGCAGTTGCATCAAGGAAGTTATGTCCTAATTCATGCTCGTATGTCGATGTATCTGCTGCCTGAACAAGAG
CTAACTTCGATGCTCTTTAGCCGTTACACCATGGTGGTTGATATGCAATTTGACTCTATTTTAACTGCTTGCTTC
AATAGATTCTCTCGAAACAGATGGAGCGGAGGAGGTTATCTCAAGGTTCACCAAGGTGTCGGCAATCTTATCGAT
TGGTACAATGTCCAATTCTACAACCGTACGTCCCCTCCGTCCAAATTTACTTTCGCATCACCAATCATATGAACA
GAGGATCCAGGTGTCAACGAGTACACCGCTTGTAATAACCTTCTAACAGCTTCGTCAAGTACCTGGCCCAAAACT
TCTGTGTTCGAGATTGCCGCAAGTGTCGTCCCACTCAGTAAGATTGTCATCGGAAAACCAGCCACAGCTAGTGAC
GCCGGAAGCGGGTTCATTTCAACTTCGGTTTTGCGCGCAGCAGGCAAAAAACCAAGGATGGAGTTAGTCATCTCT
TTTAAAATTCTAGAAAACGAGGACTAATGCCTTGATTCCTAGACGGTGGTATTATGACCTGGCAGGTATGTATTT
TGATATAGTTCGAAGTTGAAGATTGATGTTCGATTATTTTGAATTAACTAGTACCCCCAAGCCGCCTCTCCTTGG
ATTACTTCTGTTCGTTCGCTCTCTTGGCCTGTATAAGGCTAGATAGACCATTAGAACGGTTTGTAGATAGTCCTC
GCTTTGAATCCATAGGGATCTGATTCACACATTTTTGGATATACTTGTCAAAATTGGGATTGCAAGACATGTTGG
ATCGAGAAGAAGTTTCTGGTGGCATCCAATCCGTATTTCGCGATAGTCGATTTGTCCTATCCACAGAACAGAGTT
TGAAGTTTCCCACACGCGATCCTACGATCGGAGCTCAATTCGCCATATCGGGGGATGCGCATCGCGTGGCTCTGT
TCCAAAAACAGGCCGCTCGGGTCTGTTCTCGGGTTTGCTTCAGACCATTCGCATGGTCTCATTTCCTCAGCTGAC
ATCGTTCAATTATTTCCGCTCGAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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