Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|092100
Gene name
Locationscaffold_6:1015033..1016928
Strand+
Gene length (bp)1895
Transcript length (bp)1089
Coding sequence length (bp)1089
Protein length (aa) 363

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01545 Cation_efflux Cation efflux family 7.7E-45 11 242

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P20107|ZRC1_YEAST Zinc/cadmium resistance protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRC1 PE=1 SV=2 6 322 2.0E-59
sp|O13918|ZHF1_SCHPO Zinc homeostasis factor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zhf1 PE=2 SV=3 1 322 8.0E-57
sp|P32798|COT1_YEAST Cobalt uptake protein COT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COT1 PE=1 SV=2 6 336 1.0E-55
sp|Q3UVU3|ZNT10_MOUSE Zinc transporter 10 OS=Mus musculus GN=Slc30a10 PE=1 SV=1 3 321 9.0E-43
sp|O35149|ZNT4_MOUSE Zinc transporter 4 OS=Mus musculus GN=Slc30a4 PE=1 SV=2 2 326 3.0E-34
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P20107|ZRC1_YEAST Zinc/cadmium resistance protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRC1 PE=1 SV=2 6 322 2.0E-59
sp|O13918|ZHF1_SCHPO Zinc homeostasis factor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zhf1 PE=2 SV=3 1 322 8.0E-57
sp|P32798|COT1_YEAST Cobalt uptake protein COT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COT1 PE=1 SV=2 6 336 1.0E-55
sp|Q3UVU3|ZNT10_MOUSE Zinc transporter 10 OS=Mus musculus GN=Slc30a10 PE=1 SV=1 3 321 9.0E-43
sp|O35149|ZNT4_MOUSE Zinc transporter 4 OS=Mus musculus GN=Slc30a4 PE=1 SV=2 2 326 3.0E-34
sp|O55174|ZNT4_RAT Zinc transporter 4 OS=Rattus norvegicus GN=Slc30a4 PE=2 SV=1 2 327 2.0E-33
sp|O14863|ZNT4_HUMAN Zinc transporter 4 OS=Homo sapiens GN=SLC30A4 PE=2 SV=2 2 326 1.0E-30
sp|Q60738|ZNT1_MOUSE Zinc transporter 1 OS=Mus musculus GN=Slc30a1 PE=1 SV=1 2 329 2.0E-30
sp|Q62720|ZNT1_RAT Zinc transporter 1 OS=Rattus norvegicus GN=Slc30a1 PE=2 SV=1 2 329 3.0E-30
sp|A7Z1S6|CZCD_BACMF Cadmium, cobalt and zinc/H(+)-K(+) antiporter OS=Bacillus methylotrophicus (strain DSM 23117 / BGSC 10A6 / FZB42) GN=czcD PE=3 SV=1 2 321 3.0E-28
sp|O07084|CZCD_BACSU Cadmium, cobalt and zinc/H(+)-K(+) antiporter OS=Bacillus subtilis (strain 168) GN=czcD PE=1 SV=1 2 332 5.0E-27
sp|Q8H329|MTP8_ORYSJ Metal tolerance protein 8 OS=Oryza sativa subsp. japonica GN=MTP8 PE=2 SV=2 2 321 9.0E-27
sp|Q5XHB4|ZNT8_XENTR Zinc transporter 8 OS=Xenopus tropicalis GN=slc30a8 PE=2 SV=1 6 327 8.0E-26
sp|Q5I020|ZNT8_XENLA Zinc transporter 8 OS=Xenopus laevis GN=slc30a8 PE=2 SV=1 6 286 2.0E-25
sp|Q54QU8|Y3629_DICDI Probable zinc transporter protein DDB_G0283629 OS=Dictyostelium discoideum GN=DDB_G0283629 PE=3 SV=1 2 321 8.0E-25
sp|Q8R4H9|ZNT5_MOUSE Zinc transporter 5 OS=Mus musculus GN=Slc30a5 PE=1 SV=1 3 321 2.0E-24
sp|Q54F34|Y1141_DICDI Probable zinc transporter protein DDB_G0291141 OS=Dictyostelium discoideum GN=DDB_G0291141 PE=3 SV=1 4 306 1.0E-22
sp|Q8TAD4|ZNT5_HUMAN Zinc transporter 5 OS=Homo sapiens GN=SLC30A5 PE=1 SV=1 3 321 1.0E-22
sp|Q2HJ10|ZNT2_MOUSE Zinc transporter 2 OS=Mus musculus GN=Slc30a2 PE=2 SV=1 13 288 1.0E-22
sp|Q08E25|ZNT3_BOVIN Zinc transporter 3 OS=Bos taurus GN=SLC30A3 PE=2 SV=1 1 290 2.0E-22
sp|Q5ZLF4|ZNT5_CHICK Zinc transporter 5 OS=Gallus gallus GN=SLC30A5 PE=2 SV=1 3 321 6.0E-22
sp|Q9M271|MTPA1_ARATH Metal tolerance protein A1 OS=Arabidopsis thaliana GN=MTPA1 PE=2 SV=1 6 321 1.0E-21
sp|Q6XR72|ZNT10_HUMAN Zinc transporter 10 OS=Homo sapiens GN=SLC30A10 PE=1 SV=2 3 132 3.0E-21
sp|Q6QIX3|ZNT3_RAT Zinc transporter 3 OS=Rattus norvegicus GN=Slc30a3 PE=1 SV=1 12 326 7.0E-21
sp|Q9ZT63|MTP1_ARATH Metal tolerance protein 1 OS=Arabidopsis thaliana GN=MTP1 PE=1 SV=2 6 321 7.0E-21
sp|Q99726|ZNT3_HUMAN Zinc transporter 3 OS=Homo sapiens GN=SLC30A3 PE=1 SV=2 12 290 8.0E-21
sp|Q5R617|ZNT3_PONAB Zinc transporter 3 OS=Pongo abelii GN=SLC30A3 PE=2 SV=1 12 290 1.0E-20
sp|Q8Z8B6|ZITB_SALTI Zinc transporter ZitB OS=Salmonella typhi GN=zitB PE=3 SV=1 2 323 1.0E-20
sp|P13512|CZCD_CUPMC Metal cation efflux system protein CzcD OS=Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) GN=czcD PE=1 SV=2 3 326 2.0E-20
sp|P94178|CZCD_ALCSC Cation efflux system protein CzcD OS=Alcaligenes sp. (strain CT14) GN=czcD PE=3 SV=1 3 326 2.0E-20
sp|A4IFD7|ZNT7_BOVIN Zinc transporter 7 OS=Bos taurus GN=SLC30A7 PE=2 SV=1 2 288 3.0E-20
sp|Q9SI03|MTP12_ARATH Metal tolerance protein 12 OS=Arabidopsis thaliana GN=MTP12 PE=3 SV=1 2 292 1.0E-19
sp|Q8IWU4|ZNT8_HUMAN Zinc transporter 8 OS=Homo sapiens GN=SLC30A8 PE=1 SV=2 13 320 2.0E-19
sp|Q8NEW0|ZNT7_HUMAN Zinc transporter 7 OS=Homo sapiens GN=SLC30A7 PE=2 SV=1 2 288 5.0E-19
sp|Q54T06|Y8206_DICDI Probable zinc transporter protein DDB_G0282067 OS=Dictyostelium discoideum GN=DDB_G0282067 PE=2 SV=1 176 322 6.0E-19
sp|P97441|ZNT3_MOUSE Zinc transporter 3 OS=Mus musculus GN=Slc30a3 PE=1 SV=1 17 290 1.0E-18
sp|Q8ZQT3|ZITB_SALTY Zinc transporter ZitB OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=zitB PE=3 SV=1 2 323 1.0E-18
sp|Q6DG36|ZNT5_DANRE Zinc transporter 5 OS=Danio rerio GN=slc30a5 PE=2 SV=1 3 321 2.0E-18
sp|Q28CE7|ZNT5_XENTR Zinc transporter 5 OS=Xenopus tropicalis GN=slc30a5 PE=2 SV=1 3 321 2.0E-18
sp|Q6DBM8|MTPB_ARATH Metal tolerance protein B OS=Arabidopsis thaliana GN=MTPB PE=2 SV=1 2 321 4.0E-18
sp|Q9LXS1|MTPA2_ARATH Metal tolerance protein A2 OS=Arabidopsis thaliana GN=MTPA2 PE=2 SV=2 17 321 9.0E-18
sp|Q688R1|MTP1_ORYSJ Metal tolerance protein 1 OS=Oryza sativa subsp. japonica GN=MTP1 PE=2 SV=1 1 321 1.0E-17
sp|Q9Y6M5|ZNT1_HUMAN Zinc transporter 1 OS=Homo sapiens GN=SLC30A1 PE=1 SV=3 2 135 2.0E-17
sp|Q5MNV6|ZNT7_CHICK Zinc transporter 7 OS=Gallus gallus GN=SLC30A7 PE=2 SV=1 2 288 2.0E-17
sp|Q4R6K2|ZNT1_MACFA Zinc transporter 1 OS=Macaca fascicularis GN=SLC30A1 PE=2 SV=1 2 135 2.0E-17
sp|Q8ZGY6|ZITB_YERPE Zinc transporter ZitB OS=Yersinia pestis GN=zitB PE=3 SV=1 2 323 2.0E-17
sp|Q6XR72|ZNT10_HUMAN Zinc transporter 10 OS=Homo sapiens GN=SLC30A10 PE=1 SV=2 177 321 4.0E-17
sp|Q62941|ZNT2_RAT Zinc transporter 2 OS=Rattus norvegicus GN=Slc30a2 PE=2 SV=1 13 288 8.0E-17
sp|Q66D85|ZITB_YERPS Zinc transporter ZitB OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=zitB PE=3 SV=1 2 323 2.0E-16
sp|Q83SA2|ZITB_SHIFL Zinc transporter ZitB OS=Shigella flexneri GN=zitB PE=3 SV=1 2 321 6.0E-16
sp|Q8BGG0|ZNT8_MOUSE Zinc transporter 8 OS=Mus musculus GN=Slc30a8 PE=2 SV=1 13 286 6.0E-16
sp|P75757|ZITB_ECOLI Zinc transporter ZitB OS=Escherichia coli (strain K12) GN=zitB PE=1 SV=1 2 321 7.0E-16
sp|Q8X400|ZITB_ECO57 Zinc transporter ZitB OS=Escherichia coli O157:H7 GN=zitB PE=3 SV=1 2 323 8.0E-16
sp|P0CE46|ZNT8_RAT Zinc transporter 8 OS=Rattus norvegicus GN=Slc30a8 PE=1 SV=1 13 286 9.0E-16
sp|Q5BJM8|ZNT7_RAT Zinc transporter 7 OS=Rattus norvegicus GN=Slc30a7 PE=2 SV=2 2 288 2.0E-14
sp|Q9JKN1|ZNT7_MOUSE Zinc transporter 7 OS=Mus musculus GN=Slc30a7 PE=1 SV=1 2 288 2.0E-14
sp|Q95QW4|CDF1_CAEEL Cation diffusion facilitator family protein 1 OS=Caenorhabditis elegans GN=cdf-1 PE=1 SV=1 18 128 3.0E-12
sp|Q4R6K2|ZNT1_MACFA Zinc transporter 1 OS=Macaca fascicularis GN=SLC30A1 PE=2 SV=1 176 329 7.0E-12
sp|Q9Y6M5|ZNT1_HUMAN Zinc transporter 1 OS=Homo sapiens GN=SLC30A1 PE=1 SV=3 176 329 8.0E-12
sp|Q54T06|Y8206_DICDI Probable zinc transporter protein DDB_G0282067 OS=Dictyostelium discoideum GN=DDB_G0282067 PE=2 SV=1 4 129 4.0E-11
sp|Q95QW4|CDF1_CAEEL Cation diffusion facilitator family protein 1 OS=Caenorhabditis elegans GN=cdf-1 PE=1 SV=1 176 330 9.0E-11
sp|Q55E98|Y9332_DICDI Probable zinc transporter protein DDB_G0269332 OS=Dictyostelium discoideum GN=DDB_G0269332 PE=3 SV=1 3 286 2.0E-10
sp|Q9BRI3|ZNT2_HUMAN Zinc transporter 2 OS=Homo sapiens GN=SLC30A2 PE=1 SV=1 74 292 2.0E-10
sp|Q6D7E5|ZITB_PECAS Zinc transporter ZitB OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=zitB PE=3 SV=1 3 327 6.0E-09
sp|A5PMX1|ZNT7_DANRE Zinc transporter 7 OS=Danio rerio GN=slc30a7 PE=2 SV=1 2 131 4.0E-08
sp|Q52KD7|ZNT7A_XENLA Zinc transporter 7-A OS=Xenopus laevis GN=slc30a7-a PE=2 SV=1 11 131 5.0E-08
sp|Q03455|MSC2_YEAST Probable zinc transporter MSC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MSC2 PE=1 SV=2 2 203 6.0E-08
sp|Q9HGQ3|CIS4_SCHPO Probable zinc transporter cis4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cis4 PE=1 SV=1 2 127 5.0E-07
sp|Q6NRI1|ZNT7B_XENLA Zinc transporter 7-B OS=Xenopus laevis GN=slc30a7-b PE=2 SV=1 157 288 3.0E-06
sp|Q6P3N9|ZNT7_XENTR Zinc transporter 7 OS=Xenopus tropicalis GN=slc30a7 PE=2 SV=1 156 288 4.0E-06
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GO

GO Term Description Terminal node
GO:0008324 cation transmembrane transporter activity Yes
GO:0006812 cation transport Yes
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0031224 intrinsic component of membrane No
GO:0110165 cellular anatomical entity No
GO:0005215 transporter activity No
GO:0009987 cellular process No
GO:0008150 biological_process No
GO:0015075 ion transmembrane transporter activity No
GO:0022857 transmembrane transporter activity No
GO:0006810 transport No
GO:0051234 establishment of localization No
GO:0051179 localization No
GO:0006811 ion transport No
GO:0003674 molecular_function No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 26 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19
2 75 97 22
3 109 131 22
4 182 204 22
5 216 235 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Casing Casing mycelium 32.14 17.77 46.52
Initials Initials knots 12.57 6.15 18.98
Pileal_Stipeal_center Stage I stipe center 14.92 7.48 22.36
Pileal_Stipeal_shell Stage I stipe shell 42.19 23.94 60.45
DIF_stipe_center Stage II stipe center 16.63 8.29 24.97
DIF_stipe_shell Stage II stipe shell 14.04 6.92 21.15
DIF_stipe_skin Stage II stipe skin 14.08 6.72 21.44
DIF_cap_skin Stage II cap skin 35.87 20.21 51.53
DIF_cap_tissue Stage II cap tissue 30.61 16.57 44.64
DIF_gill_tissue Stage II gill tissue 28.75 15.23 42.27
YFB_stipe_center Young fruiting body stipe center 14.05 6.69 21.42
YFB_stipe_shell Young fruiting body stipe shell 22.63 11.48 33.79
YFB_stipe_skin Young fruiting body stipe skin 23.46 12.41 34.52
YFB_cap_skin Young fruiting body cap skin 47.17 27.33 67.00
YFB_cap_tissue Young fruiting body cap tissue 33.32 18.54 48.10
YFB_gill_tissue Young fruiting body gill tissue 44.84 25.11 64.56
YFB_veil Young fruiting body veil 46.50 25.77 67.22

Differential expression

Label1 Label2 Q-value Significant difference
Casing DIF_gill_tissue 0.833865 no
Casing YFB_stipe_center 0.010412 yes
Casing YFB_stipe_shell 0.378960 no
Casing YFB_stipe_skin 0.429814 no
Casing YFB_cap_skin 0.270961 no
Casing YFB_cap_tissue 0.955744 no
Casing YFB_gill_tissue 0.370584 no
Casing YFB_veil 0.302600 no
Casing Initials 0.002951 yes
Casing Pileal_Stipeal_center 0.016949 yes
Casing Pileal_Stipeal_shell 0.505435 no
Casing DIF_stipe_center 0.048007 yes
Casing DIF_stipe_shell 0.008457 yes
Casing DIF_stipe_skin 0.009773 yes
Casing DIF_cap_skin 0.839383 no
Casing DIF_cap_tissue 0.937978 no
DIF_gill_tissue YFB_stipe_center 0.029408 yes
DIF_gill_tissue YFB_stipe_shell 0.586451 no
DIF_gill_tissue YFB_stipe_skin 0.649913 no
DIF_gill_tissue YFB_cap_skin 0.109313 no
DIF_gill_tissue YFB_cap_tissue 0.758474 no
DIF_gill_tissue YFB_gill_tissue 0.166579 no
DIF_gill_tissue YFB_veil 0.127930 no
YFB_stipe_center YFB_stipe_shell 0.207281 no
YFB_stipe_center YFB_stipe_skin 0.155834 no
YFB_stipe_center YFB_cap_skin 0.000613 yes
YFB_stipe_center YFB_cap_tissue 0.005671 yes
YFB_stipe_center YFB_gill_tissue 0.000613 yes
YFB_stipe_center YFB_veil 0.000613 yes
YFB_stipe_shell YFB_stipe_skin 0.956407 no
YFB_stipe_shell YFB_cap_skin 0.015819 yes
YFB_stipe_shell YFB_cap_tissue 0.291749 no
YFB_stipe_shell YFB_gill_tissue 0.026955 yes
YFB_stipe_shell YFB_veil 0.018066 yes
YFB_stipe_skin YFB_cap_skin 0.013186 yes
YFB_stipe_skin YFB_cap_tissue 0.332363 no
YFB_stipe_skin YFB_gill_tissue 0.029890 yes
YFB_stipe_skin YFB_veil 0.015242 yes
YFB_cap_skin YFB_cap_tissue 0.307289 no
YFB_cap_skin YFB_gill_tissue 0.929909 no
YFB_cap_skin YFB_veil 0.980585 no
YFB_cap_tissue YFB_gill_tissue 0.409062 no
YFB_cap_tissue YFB_veil 0.335141 no
YFB_gill_tissue YFB_veil 0.950593 no
Initials DIF_gill_tissue 0.009773 yes
Initials YFB_stipe_center 0.860069 no
Initials YFB_stipe_shell 0.101705 no
Initials YFB_stipe_skin 0.071041 no
Initials YFB_cap_skin 0.000613 yes
Initials YFB_cap_tissue 0.001625 yes
Initials YFB_gill_tissue 0.000613 yes
Initials YFB_veil 0.000613 yes
Initials Pileal_Stipeal_center 0.756936 no
Initials Pileal_Stipeal_shell 0.000613 yes
Initials DIF_stipe_center 0.543069 no
Initials DIF_stipe_shell 0.854579 no
Initials DIF_stipe_skin 0.855303 no
Initials DIF_cap_skin 0.001140 yes
Initials DIF_cap_tissue 0.004548 yes
Pileal_Stipeal_center DIF_gill_tissue 0.042692 yes
Pileal_Stipeal_center YFB_stipe_center 0.930714 no
Pileal_Stipeal_center YFB_stipe_shell 0.286315 no
Pileal_Stipeal_center YFB_stipe_skin 0.222255 no
Pileal_Stipeal_center YFB_cap_skin 0.000613 yes
Pileal_Stipeal_center YFB_cap_tissue 0.008121 yes
Pileal_Stipeal_center YFB_gill_tissue 0.000613 yes
Pileal_Stipeal_center YFB_veil 0.000613 yes
Pileal_Stipeal_center Pileal_Stipeal_shell 0.001140 yes
Pileal_Stipeal_center DIF_stipe_center 0.858347 no
Pileal_Stipeal_center DIF_stipe_shell 0.926419 no
Pileal_Stipeal_center DIF_stipe_skin 0.934016 no
Pileal_Stipeal_center DIF_cap_skin 0.004160 yes
Pileal_Stipeal_center DIF_cap_tissue 0.023676 yes
Pileal_Stipeal_shell DIF_gill_tissue 0.271557 no
Pileal_Stipeal_shell YFB_stipe_center 0.000613 yes
Pileal_Stipeal_shell YFB_stipe_shell 0.059318 no
Pileal_Stipeal_shell YFB_stipe_skin 0.068461 no
Pileal_Stipeal_shell YFB_cap_skin 0.827726 no
Pileal_Stipeal_shell YFB_cap_tissue 0.563074 no
Pileal_Stipeal_shell YFB_gill_tissue 0.917463 no
Pileal_Stipeal_shell YFB_veil 0.854474 no
Pileal_Stipeal_shell DIF_stipe_center 0.002951 yes
Pileal_Stipeal_shell DIF_stipe_shell 0.000613 yes
Pileal_Stipeal_shell DIF_stipe_skin 0.000613 yes
Pileal_Stipeal_shell DIF_cap_skin 0.731405 no
Pileal_Stipeal_shell DIF_cap_tissue 0.398608 no
DIF_stipe_center DIF_gill_tissue 0.105864 no
DIF_stipe_center YFB_stipe_center 0.762523 no
DIF_stipe_center YFB_stipe_shell 0.473948 no
DIF_stipe_center YFB_stipe_skin 0.387524 no
DIF_stipe_center YFB_cap_skin 0.000613 yes
DIF_stipe_center YFB_cap_tissue 0.026710 yes
DIF_stipe_center YFB_gill_tissue 0.000613 yes
DIF_stipe_center YFB_veil 0.000613 yes
DIF_stipe_center DIF_stipe_shell 0.750149 no
DIF_stipe_center DIF_stipe_skin 0.764972 no
DIF_stipe_center DIF_cap_skin 0.013782 yes
DIF_stipe_center DIF_cap_tissue 0.066207 no
DIF_stipe_shell DIF_gill_tissue 0.021056 yes
DIF_stipe_shell YFB_stipe_center 0.998634 no
DIF_stipe_shell YFB_stipe_shell 0.190974 no
DIF_stipe_shell YFB_stipe_skin 0.137029 no
DIF_stipe_shell YFB_cap_skin 0.000613 yes
DIF_stipe_shell YFB_cap_tissue 0.002525 yes
DIF_stipe_shell YFB_gill_tissue 0.000613 yes
DIF_stipe_shell YFB_veil 0.000613 yes
DIF_stipe_shell DIF_stipe_skin 0.995749 no
DIF_stipe_shell DIF_cap_skin 0.001625 yes
DIF_stipe_shell DIF_cap_tissue 0.011041 yes
DIF_stipe_skin DIF_gill_tissue 0.027205 yes
DIF_stipe_skin YFB_stipe_center 0.996834 no
DIF_stipe_skin YFB_stipe_shell 0.202683 no
DIF_stipe_skin YFB_stipe_skin 0.147674 no
DIF_stipe_skin YFB_cap_skin 0.000613 yes
DIF_stipe_skin YFB_cap_tissue 0.008121 yes
DIF_stipe_skin YFB_gill_tissue 0.000613 yes
DIF_stipe_skin YFB_veil 0.000613 yes
DIF_stipe_skin DIF_cap_skin 0.006032 yes
DIF_stipe_skin DIF_cap_tissue 0.017507 yes
DIF_cap_skin DIF_gill_tissue 0.591306 no
DIF_cap_skin YFB_stipe_center 0.002084 yes
DIF_cap_skin YFB_stipe_shell 0.176925 no
DIF_cap_skin YFB_stipe_skin 0.215396 no
DIF_cap_skin YFB_cap_skin 0.458917 no
DIF_cap_skin YFB_cap_tissue 0.893575 no
DIF_cap_skin YFB_gill_tissue 0.579705 no
DIF_cap_skin YFB_veil 0.493477 no
DIF_cap_skin DIF_cap_tissue 0.737140 no
DIF_cap_tissue DIF_gill_tissue 0.914126 no
DIF_cap_tissue YFB_stipe_center 0.013782 yes
DIF_cap_tissue YFB_stipe_shell 0.459335 no
DIF_cap_tissue YFB_stipe_skin 0.522223 no
DIF_cap_tissue YFB_cap_skin 0.186312 no
DIF_cap_tissue YFB_cap_tissue 0.881589 no
DIF_cap_tissue YFB_gill_tissue 0.267771 no
DIF_cap_tissue YFB_veil 0.215732 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|092100
MKNTTKIGFVLVISLAFFCAEIAVGFRTKSLALIADALHYLNDIVAYTIAFIAAYLQDSGQHTVKFTFAFHRAEL
VGAFFNGVFLLALAISILLQSIERFVHLEEITEPSLVLIIGCVGLGLNILSVFVVHDHHGHGGHGHGQPIQMNDL
NPNTCDHVHATHNHTIDPPISSHQHNLGLLGVLVHLCGDAVNNLAVIVAAIIIWKLDAHSRFYADPAVSLAISFI
IFASAIPMTWKTGRILLEAVPLYIDLAKVKEDLLAIPDVLSIHDLHVWHLSQSVILASLHVCVPSGTSLVHWEQI
EQTLQHCFQAYGISHVTISPELRRSESHSLSNEKGGCIRLSSEDDIGCSVNEFKKRRLIGDV*
Coding >AgabiH97|092100
ATGAAAAACACTACGAAGATTGGCTTCGTCTTAGTGATCAGCTTGGCATTCTTTTGCGCAGAAATTGCAGTGGGT
TTCAGAACGAAGAGTCTGGCTCTCATTGCTGATGCGCTCCACTACCTGAATGACATCGTGGCTTATACCATCGCC
TTCATTGCTGCATATTTGCAAGACAGCGGACAACATACTGTGAAATTTACTTTTGCCTTTCATCGCGCAGAACTC
GTTGGCGCATTTTTCAATGGTGTCTTCCTCCTGGCGTTAGCCATTTCTATCCTTCTTCAATCTATTGAGCGGTTC
GTCCATTTGGAGGAAATCACTGAGCCATCCTTGGTGTTGATTATTGGCTGTGTCGGCTTGGGTCTCAATATACTA
AGCGTTTTCGTGGTCCACGACCATCATGGTCATGGTGGTCATGGGCATGGTCAGCCGATACAGATGAACGATCTA
AATCCGAATACTTGCGATCATGTACATGCGACTCATAATCATACCATCGATCCGCCGATCAGTTCTCATCAACAT
AATCTCGGACTACTCGGAGTCTTGGTTCACCTATGCGGTGACGCTGTAAACAATCTAGCGGTGATCGTAGCTGCC
ATCATCATATGGAAGCTAGACGCACATAGTCGGTTTTATGCTGATCCAGCCGTTTCTCTGGCTATCAGTTTTATT
ATATTCGCGAGTGCGATTCCCATGACCTGGAAAACGGGTCGAATCCTTTTGGAAGCCGTGCCACTCTACATTGAT
CTCGCCAAAGTCAAAGAGGACTTGCTTGCGATTCCTGATGTTTTGTCTATTCATGATCTTCATGTCTGGCATCTC
TCTCAATCCGTGATTCTGGCTTCCTTACACGTATGCGTGCCGTCCGGTACCTCCTTGGTACACTGGGAACAAATC
GAACAAACGCTACAGCACTGTTTTCAAGCATACGGAATCAGTCATGTCACAATCTCTCCAGAACTACGGCGCTCC
GAATCTCACTCACTTTCGAACGAAAAGGGAGGTTGCATTCGACTCTCATCTGAAGATGATATCGGGTGTTCCGTC
AACGAATTCAAGAAACGGCGATTAATAGGAGATGTTTAA
Transcript >AgabiH97|092100
ATGAAAAACACTACGAAGATTGGCTTCGTCTTAGTGATCAGCTTGGCATTCTTTTGCGCAGAAATTGCAGTGGGT
TTCAGAACGAAGAGTCTGGCTCTCATTGCTGATGCGCTCCACTACCTGAATGACATCGTGGCTTATACCATCGCC
TTCATTGCTGCATATTTGCAAGACAGCGGACAACATACTGTGAAATTTACTTTTGCCTTTCATCGCGCAGAACTC
GTTGGCGCATTTTTCAATGGTGTCTTCCTCCTGGCGTTAGCCATTTCTATCCTTCTTCAATCTATTGAGCGGTTC
GTCCATTTGGAGGAAATCACTGAGCCATCCTTGGTGTTGATTATTGGCTGTGTCGGCTTGGGTCTCAATATACTA
AGCGTTTTCGTGGTCCACGACCATCATGGTCATGGTGGTCATGGGCATGGTCAGCCGATACAGATGAACGATCTA
AATCCGAATACTTGCGATCATGTACATGCGACTCATAATCATACCATCGATCCGCCGATCAGTTCTCATCAACAT
AATCTCGGACTACTCGGAGTCTTGGTTCACCTATGCGGTGACGCTGTAAACAATCTAGCGGTGATCGTAGCTGCC
ATCATCATATGGAAGCTAGACGCACATAGTCGGTTTTATGCTGATCCAGCCGTTTCTCTGGCTATCAGTTTTATT
ATATTCGCGAGTGCGATTCCCATGACCTGGAAAACGGGTCGAATCCTTTTGGAAGCCGTGCCACTCTACATTGAT
CTCGCCAAAGTCAAAGAGGACTTGCTTGCGATTCCTGATGTTTTGTCTATTCATGATCTTCATGTCTGGCATCTC
TCTCAATCCGTGATTCTGGCTTCCTTACACGTATGCGTGCCGTCCGGTACCTCCTTGGTACACTGGGAACAAATC
GAACAAACGCTACAGCACTGTTTTCAAGCATACGGAATCAGTCATGTCACAATCTCTCCAGAACTACGGCGCTCC
GAATCTCACTCACTTTCGAACGAAAAGGGAGGTTGCATTCGACTCTCATCTGAAGATGATATCGGGTGTTCCGTC
AACGAATTCAAGAAACGGCGATTAATAGGAGATGTTTAA
Gene >AgabiH97|092100
ATGAAAAACACTACGAAGATTGGCTTCGTCTTAGTGATCAGCTTGGCATTCTTTTGCGCAGAAATTGCAGGCGAG
CAACCTTATGCCGTCGTTGTCTTCTCATGAATAACATGTCAGCCTCGATCTCAGTGGGTTTCAGAACGAAGAGTC
TGGCTCTCATTGCTGATGCGGTTCGTCAGTTCCAAGGGGTTCTGTTCTGTATCAGCTGATATTATTCCAGCTCCA
CTACCTGAATGTGAGCCCGCGAGGCTGTAGATGTGTGACATTTCTGGCTCATGTTTGTCGTGCTGCGCATAACAG
GACATCGTGGCTTAGTGAGTCAGTGACTTCCGGAATGCTTCCGCTTATTCATATCACCGACACAGTACCATCGCC
TTCATTGCTGCATATGTACGTTCTTCTGCCAAGTTCTATGTAATAACAATCTAATGAATTCGCTGTCGACCCTCT
TAAGTTGCAAGACAGCGGACAACATGTTGGTTTTTATTCAATACACCAATTCATCCAATAGTCACCCATTAATTT
TGAATTTCTATTTTTAGACTGTGAAATTTACTTTTGCCTTTCATCGCGCAGAACTCGTTGGTAAGAATATATACT
CCGGGCCACATTCCGTCATTCATTTTTTCCACAGGCGCATTTTTCAATGGTGTCTTCCTCCTGGCGTTAGCCATT
TCTATCCTTCTTCAATCTATTGAGCGGTTCGTCCATTTGGAGGAAATCACTGAGCCATCCTTGGTGTTGATTATT
GGCTGTGTCGGCTTGGGTCTCAATATACTAAGCGTTTTCGTGGTCCACGGTATGTTCTCATCGCCGTTAGAGTGG
AATTCATAATTCTGATGCCATATTGCGAAAATATGGCAGACCATCATGGTCATGGTGGTCATGGGCATGGTCAGC
CGATACAGATGAACGATCTAAATCCGAATACTTGCGATCATGTAGTATGTTCACCCTCTTCTTTTCCTCATACAA
CCATTTGGAAACTGACTTTAGGGTTTTTTCAGCATGCGACTCATAATCATACCATCGATCCGCCGATCAGTTCTC
ATCAACATAATCTCGGACTACTCGGAGTCTTGGTTCACCTATGCGGTGACGCTGTAAACAGTAAGTTTTTTTCCA
ACACCAATATTACTGCGGAGTCCGACTCATCATGAATTGTGATGATTCGACAGATCTAGCGGTGATCGTAGCTGC
CATCATCATATGGAAGCTAGACGCACATAGTCGGTTTTATGCTGATCCAGCCGTTTCTCTGGCTATCAGTTTTAT
TATATTCGCGAGTGCGATTCCCATGAGTTGAGTGGCGCAGTTAACAGAAGGAAAAAGATATTAAAAATTCACTCT
TTTGCAGCCTGGAAAACGGGTCGAATCCTTTTGGAAGCCGTGCCACTCTACATTGATCTCGCCAAAGTCAAAGAG
GACTTGCTTGCGGTTCGTACAAGTTTATAGTATCGTAATGGTGCTAGCTCACATTTTTGTCTAGATTCCTGATGT
TTTGTCTATTCATGATCTTCATGTCTGGCATCTCTCTCAATCGTATGCCTATTTCTTTTTTTTTTGCGTTGTTCT
ACATTTTGCTCAACTCACTACCGATCGTATTTCCAAACCCCCGAATTCATTCCTGAACTCGTAGCGTGATTCTGG
CTTCCTTACACGTATGCGTGCCGTCCGGTACCTCCTTGGTACACTGGGAACAAATCGAACAAACGCTACAGCACT
GTTTTCAAGCATACGGAATCAGTCATGTCACAATCTCTCCAGAACTACGGCGCTCCGAATCTCACTCACTTTCGA
ACGAAAAGGGAGGTTGCATTCGACTCTCATCTGAAGATGATATCGGGTGTTCCGTCAACGAATTCAAGAAACGGC
GATTAATAGGAGATGTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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