Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|091850
Gene name
Locationscaffold_6:954162..956046
Strand+
Gene length (bp)1884
Transcript length (bp)1554
Coding sequence length (bp)1554
Protein length (aa) 518

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF19270 FBO_C F-box only protein C-terminal region 1.2E-16 298 363
PF12937 F-box-like F-box-like 1.0E-06 236 280
PF00646 F-box F-box domain 1.1E-06 235 276

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O74531|POF7_SCHPO F-box protein pof7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pof7 PE=1 SV=2 97 517 2.0E-17
sp|Q6P3K3|FBX9_DANRE F-box only protein 9 OS=Danio rerio GN=fbxo9 PE=2 SV=1 227 396 5.0E-15
sp|Q3ZBT2|FBX9_BOVIN F-box only protein 9 OS=Bos taurus GN=FBXO9 PE=2 SV=2 103 396 1.0E-14
sp|Q9UK97|FBX9_HUMAN F-box only protein 9 OS=Homo sapiens GN=FBXO9 PE=1 SV=1 225 517 2.0E-14
sp|Q9XI00|SKI32_ARATH F-box protein 7 OS=Arabidopsis thaliana GN=SKIP32 PE=1 SV=1 233 359 3.0E-14
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Swissprot ID Swissprot Description Start End E-value
sp|O74531|POF7_SCHPO F-box protein pof7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pof7 PE=1 SV=2 97 517 2.0E-17
sp|Q6P3K3|FBX9_DANRE F-box only protein 9 OS=Danio rerio GN=fbxo9 PE=2 SV=1 227 396 5.0E-15
sp|Q3ZBT2|FBX9_BOVIN F-box only protein 9 OS=Bos taurus GN=FBXO9 PE=2 SV=2 103 396 1.0E-14
sp|Q9UK97|FBX9_HUMAN F-box only protein 9 OS=Homo sapiens GN=FBXO9 PE=1 SV=1 225 517 2.0E-14
sp|Q9XI00|SKI32_ARATH F-box protein 7 OS=Arabidopsis thaliana GN=SKIP32 PE=1 SV=1 233 359 3.0E-14
sp|Q12347|HRT3_YEAST F-box protein HRT3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HRT3 PE=1 SV=1 91 366 3.0E-14
sp|Q8BK06|FBX9_MOUSE F-box only protein 9 OS=Mus musculus GN=Fbxo9 PE=1 SV=1 19 517 4.0E-14
sp|Q5U2X1|FBX9_RAT F-box only protein 9 OS=Rattus norvegicus GN=Fbxo9 PE=1 SV=1 225 517 4.0E-14
sp|F6Y9J3|FBX9_XENTR F-box only protein 9 OS=Xenopus tropicalis GN=fbxo9 PE=3 SV=1 211 396 2.0E-13
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Nuclear localization signal|Nuclear export signal 0.6841 0.4852 0.0222 0.0281 0.2878 0.0188 0.2246 0.0603 0.2863 0.0081

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup4677
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|091850
Agaricus bisporus var bisporus H97 AgabiH97|091850 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|127_19

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|091850
MANGKAKATELSPEEESPELARFREEWKAELERRKQATRTSLQTPSSSSTTRPTEVPHIFPARSTKETHGSSTPF
DGQHPAITPDGEILDQKRPKALSSALGVYRQAVLHEQAGDLDSALMCYRQAFRTDPHVDRAYRREEMLKNMVYEQ
QIVKKDPSTPSTTTTAPTNSVMTRSPGAITEMTDEITETMRLLSIKSQTQAIVTGTFGALVASFLDQEPGRLAFK
PEDETQPVIFNDLPEEILVEIIHLLDPTSIERFAQVSKKARIVTLESSIWRSLVVSTYKEPQIPDLDVLAEIVSR
YMFDYRRIYIEQPRVRLDGVYIAICHYVRPGLSENHWVNMNHLITYHRYLRFYPNGQVLSLLANEEHPPQTIINI
LKPSLRMKGLCIGIWELTGTTVTLSNLSDASGRFIIPEELGTETENGTSTSKGIEIPPPPPSAITHPASQHRPSH
HLHSQTELQPSRYVFSMSLSLRSRPLGRWNRLDIQSYDTLNIETGDVTPVALKHERSFWFSRVRSYT*
Coding >AgabiH97|091850
ATGGCCAACGGCAAGGCCAAAGCCACCGAGCTCTCGCCAGAGGAAGAGTCTCCAGAACTCGCAAGGTTCAGAGAG
GAATGGAAGGCTGAATTAGAGAGACGCAAACAAGCTACTCGGACTTCGTTGCAAACGCCCTCATCATCCTCTACA
ACTCGACCGACTGAAGTCCCTCATATATTTCCTGCGCGCAGCACCAAGGAAACCCATGGTTCTTCTACTCCATTC
GATGGTCAACATCCGGCCATCACTCCCGACGGAGAGATACTTGACCAGAAACGTCCGAAGGCTTTATCGAGTGCA
CTCGGTGTCTATCGACAAGCAGTTCTTCACGAACAGGCTGGAGATCTAGACAGTGCTTTAATGTGCTATAGACAA
GCTTTTCGTACGGATCCTCACGTCGATCGTGCATACCGTCGCGAGGAAATGTTGAAGAACATGGTATACGAACAA
CAAATTGTAAAGAAGGATCCCTCCACCCCATCTACAACCACCACCGCCCCTACTAACTCGGTTATGACTCGATCA
CCGGGTGCCATAACCGAAATGACAGATGAGATTACAGAAACCATGAGGTTGTTGTCTATTAAATCCCAAACACAA
GCCATCGTAACCGGTACATTCGGTGCGCTCGTCGCGTCATTCTTGGATCAAGAACCAGGCAGACTCGCATTCAAA
CCTGAAGATGAAACTCAACCAGTCATTTTTAACGATCTTCCTGAGGAAATTCTCGTCGAGATAATTCATCTTTTG
GATCCTACGTCTATTGAAAGATTTGCGCAAGTCTCCAAGAAGGCCAGAATCGTAACACTGGAATCTTCTATCTGG
CGGAGTTTGGTTGTTTCGACGTATAAGGAACCTCAGATACCTGACTTGGACGTGTTGGCTGAAATTGTTTCGCGG
TATATGTTTGACTATCGACGGATATATATTGAACAACCTCGCGTGAGGCTCGATGGTGTATATATTGCCATATGC
CACTACGTACGACCAGGTTTAAGTGAAAACCACTGGGTAAACATGAATCATTTGATTACCTATCACCGTTACCTT
CGCTTTTACCCTAATGGCCAGGTCCTTTCTTTGCTCGCAAACGAGGAACATCCACCACAAACGATAATCAACATT
CTCAAACCGTCCCTCAGAATGAAGGGTTTATGCATCGGTATTTGGGAACTCACTGGAACGACTGTAACACTGTCA
AACCTCTCCGACGCCAGTGGTCGATTTATAATTCCAGAAGAATTAGGAACCGAAACTGAAAATGGAACTTCGACT
AGTAAAGGAATTGAAATACCACCACCACCACCATCTGCTATAACTCATCCAGCATCACAACATCGTCCCAGTCAT
CATCTTCACTCACAAACTGAACTACAGCCCTCTCGATATGTTTTCTCCATGTCACTTTCTCTACGGTCTCGACCT
TTAGGAAGATGGAATAGGCTGGATATACAATCGTATGATACTCTCAATATTGAAACTGGTGATGTTACCCCTGTG
GCACTTAAACATGAGAGATCATTTTGGTTCTCGAGGGTTAGGTCTTATACATGA
Transcript >AgabiH97|091850
ATGGCCAACGGCAAGGCCAAAGCCACCGAGCTCTCGCCAGAGGAAGAGTCTCCAGAACTCGCAAGGTTCAGAGAG
GAATGGAAGGCTGAATTAGAGAGACGCAAACAAGCTACTCGGACTTCGTTGCAAACGCCCTCATCATCCTCTACA
ACTCGACCGACTGAAGTCCCTCATATATTTCCTGCGCGCAGCACCAAGGAAACCCATGGTTCTTCTACTCCATTC
GATGGTCAACATCCGGCCATCACTCCCGACGGAGAGATACTTGACCAGAAACGTCCGAAGGCTTTATCGAGTGCA
CTCGGTGTCTATCGACAAGCAGTTCTTCACGAACAGGCTGGAGATCTAGACAGTGCTTTAATGTGCTATAGACAA
GCTTTTCGTACGGATCCTCACGTCGATCGTGCATACCGTCGCGAGGAAATGTTGAAGAACATGGTATACGAACAA
CAAATTGTAAAGAAGGATCCCTCCACCCCATCTACAACCACCACCGCCCCTACTAACTCGGTTATGACTCGATCA
CCGGGTGCCATAACCGAAATGACAGATGAGATTACAGAAACCATGAGGTTGTTGTCTATTAAATCCCAAACACAA
GCCATCGTAACCGGTACATTCGGTGCGCTCGTCGCGTCATTCTTGGATCAAGAACCAGGCAGACTCGCATTCAAA
CCTGAAGATGAAACTCAACCAGTCATTTTTAACGATCTTCCTGAGGAAATTCTCGTCGAGATAATTCATCTTTTG
GATCCTACGTCTATTGAAAGATTTGCGCAAGTCTCCAAGAAGGCCAGAATCGTAACACTGGAATCTTCTATCTGG
CGGAGTTTGGTTGTTTCGACGTATAAGGAACCTCAGATACCTGACTTGGACGTGTTGGCTGAAATTGTTTCGCGG
TATATGTTTGACTATCGACGGATATATATTGAACAACCTCGCGTGAGGCTCGATGGTGTATATATTGCCATATGC
CACTACGTACGACCAGGTTTAAGTGAAAACCACTGGGTAAACATGAATCATTTGATTACCTATCACCGTTACCTT
CGCTTTTACCCTAATGGCCAGGTCCTTTCTTTGCTCGCAAACGAGGAACATCCACCACAAACGATAATCAACATT
CTCAAACCGTCCCTCAGAATGAAGGGTTTATGCATCGGTATTTGGGAACTCACTGGAACGACTGTAACACTGTCA
AACCTCTCCGACGCCAGTGGTCGATTTATAATTCCAGAAGAATTAGGAACCGAAACTGAAAATGGAACTTCGACT
AGTAAAGGAATTGAAATACCACCACCACCACCATCTGCTATAACTCATCCAGCATCACAACATCGTCCCAGTCAT
CATCTTCACTCACAAACTGAACTACAGCCCTCTCGATATGTTTTCTCCATGTCACTTTCTCTACGGTCTCGACCT
TTAGGAAGATGGAATAGGCTGGATATACAATCGTATGATACTCTCAATATTGAAACTGGTGATGTTACCCCTGTG
GCACTTAAACATGAGAGATCATTTTGGTTCTCGAGGGTTAGGTCTTATACATGA
Gene >AgabiH97|091850
ATGGCCAACGGCAAGGCCAAAGCCACCGAGCTCTCGCCAGAGGAAGAGTCTCCAGAACTCGCAAGGTTCAGAGAG
GAATGGAAGGCTGAATTAGAGAGACGCAAACAAGCTACTCGGACTTCGTTGCAAACGCCCTCATCATCCTCTACA
ACTCGACCGACTGAAGTCCCTCATATATTTCCTGCGCGCAGCACCAAGGAAACCCATGGTTCTTCTACTCCATTC
GATGGTCAACATCCGGCCATCACTCCCGACGGAGAGATACTTGACCAGAAACGTCCGAAGGCTTTATCGAGTGCA
CTCGGTGTCTATCGACAAGCAGTTCTTCACGAACAGGCTGGAGATCTAGACAGTGCTTTAATGTGCTATAGACAA
GCTTTTCGTACGGTACGTCGTTTCTACCATTTTATCGCTTATTCCTCACCAGTGACTTAGGAGCTCAACAGGATC
CTCACGTCGATCGTGCATACCGTCGCGAGGAAATGTTGAAGAACATGGTATACGAACAACAAATTGTAAAGAAGG
ATCCCTCCACCCCATCTACAACCACCACCGCCCCTACTAACTCGGTTATGACTCGATCACCGGGTGCCATAACCG
AAATGACAGATGAGATTACAGAAACCATGAGGTTGTTGTCTATTAAATCCCAAACACAAGCCATCGTAACCGGTA
CATTCGGTGCGCTCGTCGCGTCATTCTTGGATCAAGAACCAGGCAGACTCGCATTCAAACCTGAAGATGAAACTC
AACCAGTCATTTTTAACGATCTTCCTGAGGAAATTCTCGTCGAGATAATTCATCTTTTGGATCCTACGTCTATTG
AAAGATTTGCGCAAGTCTCCAAGAAGGCCAGAATCGTAACACTGGAATCTTCTATCTGGCGGTACGTTGTAATAA
TTAACGAGCTATATTTAGCTTCTAACTTGCGACCATATTAGGAGTTTGGTTGTTTCGACGTATAAGGAACCTCAG
ATACCTGACTTGGACGTGTTGGCTGAAATTGTTTCGCGGTATATGTTTGACTATCGACGGATATATATTGAACAA
CCTCGCGTGAGGCTCGATGGTGTATATATTGCCATATGCCACTACGTGTGAGCACTTCACCTCGGTCTCTTTTAC
GTGGCCTAATCTTTTCCTGTCCCACAGACGACCAGGTTTAAGTGAAAACCACTGGGTAAACGTATGTCAGTATGC
GTTGAAACTTTCCCTTTCGTCTGAGAGTTTGCATAGATGAATCATTTGATTACCTATCACCGTTACCTGTAAGTC
GTCATCATCCTCTTTATCTTGCGTCTACTAAGCCTTTTGTAATTTTCAGTCGCTTTTACCCTAATGGCCAGGTCC
TTTCTTTGCTCGCAAACGAGGAACATCCACCACAAACGATAATCAACATTCTCAAACCGTCCCTCAGAATGAAGG
TTAGTTGATCACTAATGCCAAAGGTCTCGTCTTTTCCTCTGATAATTTCAAAAGGGTTTATGCATCGGTATTTGG
GAACTCACTGGAACGACTGTAACACTGTCAAACCTCTCCGACGCCAGTGGTCGATTTATAATTCCAGAAGAATTA
GGAACCGAAACTGAAAATGGAACTTCGACTAGTAAAGGAATTGAAATACCACCACCACCACCATCTGCTATAACT
CATCCAGCATCACAACATCGTCCCAGTCATCATCTTCACTCACAAACTGAACTACAGCCCTCTCGATATGTTTTC
TCCATGTCACTTTCTCTACGGTCTCGACCTTTAGGAAGATGGAATAGGCTGGATATACAATCGTATGATACTCTC
AATATTGAAACTGGTGATGTTACCCCTGTGGCACTTAAACATGAGAGATCATTTTGGTTCTCGAGGGTTAGGTCT
TATACATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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