Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|091750
Gene name
Location	scaffold_6:916034..918998
Strand	-
Gene length (bp)	2964
Transcript length (bp)	2289
Coding sequence length (bp)	2289
Protein length (aa)	763

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF16457	PH_12	Pleckstrin homology domain	2.2E-33	564	703
PF11841	ELMO_ARM	ELMO, armadillo-like helical domain	4.0E-26	135	313
PF04727	ELMO_CED12	ELMO/CED-12 family	2.3E-23	338	495

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q92556\|ELMO1_HUMAN	Engulfment and cell motility protein 1 OS=Homo sapiens GN=ELMO1 PE=1 SV=2	43	750	8.0E-39
sp\|Q8BPU7\|ELMO1_MOUSE	Engulfment and cell motility protein 1 OS=Mus musculus GN=Elmo1 PE=1 SV=2	43	750	1.0E-38
sp\|Q96JJ3\|ELMO2_HUMAN	Engulfment and cell motility protein 2 OS=Homo sapiens GN=ELMO2 PE=1 SV=2	43	750	4.0E-31
sp\|Q5RCC1\|ELMO2_PONAB	Engulfment and cell motility protein 2 OS=Pongo abelii GN=ELMO2 PE=2 SV=1	43	750	2.0E-30
sp\|A4FUD6\|ELMO2_BOVIN	Engulfment and cell motility protein 2 OS=Bos taurus GN=ELMO2 PE=2 SV=1	43	751	2.0E-30

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q92556\|ELMO1_HUMAN	Engulfment and cell motility protein 1 OS=Homo sapiens GN=ELMO1 PE=1 SV=2	43	750	8.0E-39
sp\|Q8BPU7\|ELMO1_MOUSE	Engulfment and cell motility protein 1 OS=Mus musculus GN=Elmo1 PE=1 SV=2	43	750	1.0E-38
sp\|Q96JJ3\|ELMO2_HUMAN	Engulfment and cell motility protein 2 OS=Homo sapiens GN=ELMO2 PE=1 SV=2	43	750	4.0E-31
sp\|Q5RCC1\|ELMO2_PONAB	Engulfment and cell motility protein 2 OS=Pongo abelii GN=ELMO2 PE=2 SV=1	43	750	2.0E-30
sp\|A4FUD6\|ELMO2_BOVIN	Engulfment and cell motility protein 2 OS=Bos taurus GN=ELMO2 PE=2 SV=1	43	751	2.0E-30
sp\|Q96BJ8\|ELMO3_HUMAN	Engulfment and cell motility protein 3 OS=Homo sapiens GN=ELMO3 PE=1 SV=3	42	733	4.0E-29
sp\|Q8BHL5\|ELMO2_MOUSE	Engulfment and cell motility protein 2 OS=Mus musculus GN=Elmo2 PE=1 SV=1	43	751	7.0E-29
sp\|Q8BYZ7\|ELMO3_MOUSE	Engulfment and cell motility protein 3 OS=Mus musculus GN=Elmo3 PE=1 SV=2	42	733	1.0E-28
sp\|Q499U2\|ELMO3_RAT	Engulfment and cell motility protein 3 OS=Rattus norvegicus GN=Elmo3 PE=2 SV=1	42	733	4.0E-27
sp\|A6QR40\|ELMO3_BOVIN	Engulfment and cell motility protein 3 OS=Bos taurus GN=ELMO3 PE=2 SV=1	42	647	1.0E-24
sp\|Q54YW1\|ELMOA_DICDI	ELMO domain-containing protein A OS=Dictyostelium discoideum GN=elmoA PE=1 SV=1	121	509	7.0E-10
sp\|A8XEZ1\|CED12_CAEBR	Cell death abnormality protein 12 OS=Caenorhabditis briggsae GN=ced-12 PE=3 SV=3	70	758	9.0E-10

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 49	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|091750 MSAGGASSSSRVSGLPSSTPKAPPLVPTNHVTTLEGVTVRARIDPTLTVDDVLKQLCSSLKKEPASDFALRDESD ELVTNDNLRKKIKGRVGLKLVKSPSRQAADTVEELQTREENDGKLRMALFELQKFIREEQFVQEFLKYGGLHMLV NHISIASRNSLAYALTSMQNLMDFDYGWGSLDDNFILRVVQILSSSQSPINVCRPATVILKKLVEADPLSAPGTL ASTSKGPPALPPGSVYRYGFQVVFNQMKKERGLLGTVVDRLGSADTAMAQYSMMLINSLLSHANDDGWEEFVAEL EQLNIRQAFIRSMSLHTIEDLTSCILDFQANMVRVTYRKKTTLVDPEHVPAHNDALSYIWNNSQLEVDEDDLGGI VQWRKLGFESEDIVQEFSEVGVLGLDCLRNFVETDPDFSKLVLEQSSRPEDRRCPLGKASNEVVELLSVYWNIFE PGYSTSTTFQPFFLDFYRVHFLATRFFLRMWGESGAAIGDFQRVLDLVQSQVKVALRSESVRPWREVEQEFNQSD YRAVRDRQMKELELEDDLLNKVPVRNLRAKLYKESYEFVRQQRIQCLLQGAWFVIALPQNAPREVVRRPKRPWRF MRLDSGLKYLHYVDSAVKFPVRSGLEDLPDRIDVSLINDIATGTCAPPPNVLRGDDDLPPAGVLSPSPLSFSLLN AHEGSLVDLIAPDQSRWADWTDGLNMLRKDGGHAPSTETSSFVQALTEIGLKIKLLDLSGEMVEIPTNLTAGPPP TDTNFFFSESLL*
Coding	>AgabiH97\|091750 ATGTCCGCTGGTGGTGCATCCTCTTCCTCCAGGGTTTCTGGCCTTCCAAGCAGCACGCCGAAAGCACCTCCGCTT GTACCCACAAACCACGTCACTACGCTGGAGGGCGTTACTGTCCGCGCTCGGATAGATCCAACCTTGACTGTAGAT GACGTGTTGAAGCAACTGTGCTCTAGCCTCAAAAAAGAACCTGCTTCTGATTTTGCGTTGAGGGATGAATCAGAC GAGCTTGTGACCAATGATAATTTGAGGAAGAAGATCAAGGGAAGAGTGGGTCTGAAACTTGTCAAATCGCCGTCA CGTCAGGCCGCCGATACAGTAGAGGAGCTTCAAACCAGAGAGGAGAATGACGGCAAGTTGAGGATGGCTTTATTC GAGCTGCAAAAATTCATTCGGGAGGAGCAATTTGTTCAAGAATTCCTCAAATACGGCGGCTTGCACATGTTGGTG AATCATATATCCATTGCTTCACGCAATTCACTTGCTTACGCGCTTACTTCGATGCAAAATCTAATGGACTTTGAC TACGGCTGGGGGAGTCTGGATGACAACTTCATCCTACGCGTAGTTCAGATACTTTCTTCATCTCAGTCGCCTATC AACGTCTGTCGACCCGCAACGGTTATTCTTAAAAAGCTTGTCGAGGCCGATCCTCTAAGTGCGCCGGGAACGCTA GCAAGCACTAGTAAAGGTCCCCCTGCACTTCCTCCCGGTTCTGTGTACCGTTACGGTTTCCAGGTCGTGTTTAAT CAGATGAAAAAAGAACGGGGACTCTTAGGGACAGTAGTAGATCGTCTCGGAAGTGCAGACACAGCGATGGCTCAG TACAGCATGATGCTCATTAACTCCCTTCTTTCTCATGCTAACGACGATGGCTGGGAAGAATTCGTTGCCGAGCTG GAACAGCTGAATATCCGGCAGGCTTTCATCCGATCAATGTCATTACACACAATCGAGGATCTAACTTCCTGCATC CTGGACTTTCAGGCTAACATGGTTCGTGTGACATATCGGAAGAAAACCACGTTAGTGGATCCGGAGCATGTACCC GCGCATAACGATGCATTGTCGTATATTTGGAATAACAGCCAGCTAGAAGTAGATGAAGATGATTTGGGCGGCATC GTCCAATGGCGAAAATTGGGGTTCGAAAGTGAGGACATAGTACAAGAATTCAGTGAGGTTGGAGTTCTAGGTCTC GATTGTTTGAGAAATTTTGTTGAAACAGATCCGGATTTCTCGAAGCTTGTATTGGAACAGTCTAGTAGGCCAGAA GACCGGCGATGCCCCCTGGGAAAAGCATCGAATGAAGTAGTAGAGCTACTCTCCGTATATTGGAATATTTTTGAA CCCGGTTATTCTACGTCGACGACATTCCAACCTTTCTTTCTAGATTTCTACAGAGTGCATTTCCTCGCAACGCGG TTCTTCCTTAGAATGTGGGGTGAAAGTGGTGCGGCCATCGGTGATTTTCAACGGGTCCTCGATCTAGTCCAAAGC CAAGTCAAGGTTGCTCTCCGTAGCGAAAGCGTTCGGCCATGGCGTGAAGTGGAACAGGAATTCAATCAATCCGAT TACCGCGCTGTGCGTGACCGTCAGATGAAGGAGCTAGAATTGGAGGACGATTTACTGAATAAGGTGCCTGTTCGG AATCTCCGGGCCAAGCTGTACAAAGAATCATATGAATTCGTCCGACAACAACGAATTCAATGCCTACTCCAGGGT GCCTGGTTCGTTATAGCACTACCCCAGAATGCACCCAGGGAAGTGGTACGACGACCGAAAAGGCCCTGGCGATTT ATGCGATTGGACAGCGGGCTAAAGTACTTACATTACGTTGACAGTGCCGTCAAGTTCCCTGTTCGGAGCGGCCTT GAAGACCTACCCGATCGTATTGATGTCTCCTTGATCAATGATATTGCTACTGGAACATGTGCTCCTCCACCGAAT GTCCTTCGAGGCGACGACGATTTACCCCCCGCTGGCGTACTCTCCCCTTCACCGTTGTCATTCTCACTTTTGAAC GCACATGAAGGTTCTCTAGTAGATTTGATCGCTCCTGATCAATCCCGTTGGGCTGATTGGACAGACGGACTGAAT ATGCTACGTAAAGATGGTGGGCACGCGCCTTCGACTGAGACGTCAAGTTTTGTGCAGGCGCTCACAGAGATCGGG TTGAAGATCAAATTGTTAGATCTGTCAGGTGAAATGGTCGAGATACCCACAAACCTTACAGCTGGCCCTCCACCT ACTGATACCAATTTTTTCTTTTCGGAATCCCTGCTATAA
Transcript	>AgabiH97\|091750 ATGTCCGCTGGTGGTGCATCCTCTTCCTCCAGGGTTTCTGGCCTTCCAAGCAGCACGCCGAAAGCACCTCCGCTT GTACCCACAAACCACGTCACTACGCTGGAGGGCGTTACTGTCCGCGCTCGGATAGATCCAACCTTGACTGTAGAT GACGTGTTGAAGCAACTGTGCTCTAGCCTCAAAAAAGAACCTGCTTCTGATTTTGCGTTGAGGGATGAATCAGAC GAGCTTGTGACCAATGATAATTTGAGGAAGAAGATCAAGGGAAGAGTGGGTCTGAAACTTGTCAAATCGCCGTCA CGTCAGGCCGCCGATACAGTAGAGGAGCTTCAAACCAGAGAGGAGAATGACGGCAAGTTGAGGATGGCTTTATTC GAGCTGCAAAAATTCATTCGGGAGGAGCAATTTGTTCAAGAATTCCTCAAATACGGCGGCTTGCACATGTTGGTG AATCATATATCCATTGCTTCACGCAATTCACTTGCTTACGCGCTTACTTCGATGCAAAATCTAATGGACTTTGAC TACGGCTGGGGGAGTCTGGATGACAACTTCATCCTACGCGTAGTTCAGATACTTTCTTCATCTCAGTCGCCTATC AACGTCTGTCGACCCGCAACGGTTATTCTTAAAAAGCTTGTCGAGGCCGATCCTCTAAGTGCGCCGGGAACGCTA GCAAGCACTAGTAAAGGTCCCCCTGCACTTCCTCCCGGTTCTGTGTACCGTTACGGTTTCCAGGTCGTGTTTAAT CAGATGAAAAAAGAACGGGGACTCTTAGGGACAGTAGTAGATCGTCTCGGAAGTGCAGACACAGCGATGGCTCAG TACAGCATGATGCTCATTAACTCCCTTCTTTCTCATGCTAACGACGATGGCTGGGAAGAATTCGTTGCCGAGCTG GAACAGCTGAATATCCGGCAGGCTTTCATCCGATCAATGTCATTACACACAATCGAGGATCTAACTTCCTGCATC CTGGACTTTCAGGCTAACATGGTTCGTGTGACATATCGGAAGAAAACCACGTTAGTGGATCCGGAGCATGTACCC GCGCATAACGATGCATTGTCGTATATTTGGAATAACAGCCAGCTAGAAGTAGATGAAGATGATTTGGGCGGCATC GTCCAATGGCGAAAATTGGGGTTCGAAAGTGAGGACATAGTACAAGAATTCAGTGAGGTTGGAGTTCTAGGTCTC GATTGTTTGAGAAATTTTGTTGAAACAGATCCGGATTTCTCGAAGCTTGTATTGGAACAGTCTAGTAGGCCAGAA GACCGGCGATGCCCCCTGGGAAAAGCATCGAATGAAGTAGTAGAGCTACTCTCCGTATATTGGAATATTTTTGAA CCCGGTTATTCTACGTCGACGACATTCCAACCTTTCTTTCTAGATTTCTACAGAGTGCATTTCCTCGCAACGCGG TTCTTCCTTAGAATGTGGGGTGAAAGTGGTGCGGCCATCGGTGATTTTCAACGGGTCCTCGATCTAGTCCAAAGC CAAGTCAAGGTTGCTCTCCGTAGCGAAAGCGTTCGGCCATGGCGTGAAGTGGAACAGGAATTCAATCAATCCGAT TACCGCGCTGTGCGTGACCGTCAGATGAAGGAGCTAGAATTGGAGGACGATTTACTGAATAAGGTGCCTGTTCGG AATCTCCGGGCCAAGCTGTACAAAGAATCATATGAATTCGTCCGACAACAACGAATTCAATGCCTACTCCAGGGT GCCTGGTTCGTTATAGCACTACCCCAGAATGCACCCAGGGAAGTGGTACGACGACCGAAAAGGCCCTGGCGATTT ATGCGATTGGACAGCGGGCTAAAGTACTTACATTACGTTGACAGTGCCGTCAAGTTCCCTGTTCGGAGCGGCCTT GAAGACCTACCCGATCGTATTGATGTCTCCTTGATCAATGATATTGCTACTGGAACATGTGCTCCTCCACCGAAT GTCCTTCGAGGCGACGACGATTTACCCCCCGCTGGCGTACTCTCCCCTTCACCGTTGTCATTCTCACTTTTGAAC GCACATGAAGGTTCTCTAGTAGATTTGATCGCTCCTGATCAATCCCGTTGGGCTGATTGGACAGACGGACTGAAT ATGCTACGTAAAGATGGTGGGCACGCGCCTTCGACTGAGACGTCAAGTTTTGTGCAGGCGCTCACAGAGATCGGG TTGAAGATCAAATTGTTAGATCTGTCAGGTGAAATGGTCGAGATACCCACAAACCTTACAGCTGGCCCTCCACCT ACTGATACCAATTTTTTCTTTTCGGAATCCCTGCTATAA
Gene	>AgabiH97\|091750 ATGTCCGCTGGTGGTGCATCCTCTTCCTCCAGGGTTTCTGGCCTTCCAAGCAGCACGCCGAAAGCACCTCCGCTT GTACCCACAAACCACGTCACTACGCTGGAGGGCGTTACTGTCCGCGCTCGGATAGATCCAACCTTGACTGTAGAT GACGTGTTGAAGCAACTGTGCTCTAGCCTCAAAAAAGAACCTGCTTCTGATTTTGCGTTGAGGGATGAATCAGAC GAGCTTGTGACCAATGATAATTTGAGGAAGAAGATCAAGGGAAGAGTGGGTCTGAAGTGAGCATTTCGTCTAAGG ATGAAGTGGATGGCATAGTCACTAACATGCGTATAACAGACTTGTCAAATCGCCGTCACGTCAGGCCGCCGATAC AGTAGAGGAGCTTCAAACCAGAGAGGAGAATGACGGCAAGTTGAGGATGGCTTTATTCGAGCTGCAAAAATTCAT TCGGGTACCTACAAATGGTCATTTTTTCCGTCTGAATACAACTTAAACGCGTTATAGGAGGAGCAATTTGTTCAA GAATTCCTCAAATACGGCGGCTTGCACATGTTGGTGAATCATATATCCATTGCTTCACGCAATTCACTTGCTGTG AGTCCATCATCACGTATCTTGTGTTCACATCGTCATAGTTCATATAGTACGCGCTTACTTCGATGCAAAATCTAA TGGACTTTGACTACGGCTGGGGGAGTCTGGATGACAACTTCATCCTACGCGTAGTTCAGATACTTTCTTCATCTC AGTCGCCTATCAACGTCTGTCGACCCGCAACGGTTATTCTTAAAAAGCTTGTCGAGGCCGATCCTCTAAGTGCGC CGGGAACGCTAGCAAGCACTAGTAAAGGTCCCCCTGCACTTCCTCCCGGTTCTGTGTACCGTTACGGTTTCCAGG TCGTGTTTAATCAGATGAAAAAAGAACGGGGACTCTTAGGGACAGTAGTAGATCGTCTCGGAAGTGCAGACACAG CGATGGCTCAGTACAGGTACTACCATCAGCATTTCCCCGAATTTTGTGACTGACTGGTGCTCCAGCATGATGCTC ATTAACTCCCTTCTTTCTCATGCTAACGACGATGGCTGGGAAGAATTCGTTGCCGAGCTGGAACAGCTGAATATC CGGCAGGCTTTCATCGTGAGTGAAAGTTTTACCGCTCACGAGTGAGTAACACTAGTTGCTAAATGCCTCATAGCG ATCAATGTCATTACACACAATCGAGGATCTAACTTCCTGCATCCTGGACTTTCAGGCTAACATGGTTCGTGTGAC ATATCGGAAGAAAACCACGTTAGTGGATCCGGAGCATGTACCCGCGCATAACGATGCATTGTCGTATATTTGGAA TAACAGCCAGCTAGAAGTAGATGAAGATGATTTGGGCGGCATCGTCCAATGGCGAAAATTGGGGTTCGAAAGTGA GGACATAGTACAAGAATTCAGTGAGGTTGGAGTTCTAGGTCTCGATTGTTTGGTATGCGATTCTTTCTCAATGGG GAAGCAAAACGTCACATAATATGTAATGCCAGAGAAATTTTGTTGAAACAGATCCGGATTTCTCGAAGGTGAGGG ATTATTGGAACGTATTTCCAACTAAAGCGCTGACCCTGCATTTTTAAGCTTGTATTGGAACAGTCTAGTAGGCCA GAAGACCGGCGATGCCCCCTGGGAAAAGCATCGAATGAAGTAGTAGAGCTACTCTCCGTATATTGGAATATTTTT GAACCCGGTTGTTAGTACCACCGGACGACGTCATGAGGGATCTCGCTGACTCTGCTTTTAGATTCTACGTCGACG ACATTCCAACCTTTCTTTCTAGATTTCTACAGAGTGCATTTCCTCGCAACGCGGTTCTTCCTTAGAATGTGGGGT GAAAGTGGTGCGGCCATCGGTGATTTTCAACGGGTCCTCGATCTAGTCCAAAGCCAGTGCGTACTTTGTGACCCT AAATTTCTTCATTTTAGAAACGTATTGATCTCAATCAAACCAGAGTCAAGGTTGCTCTCCGTAGCGAAAGCGTTC GGCCATGGCGTGAAGTGGAACAGGAATTCAATCAATCCGATTACCGCGCTGTGCGTGACCGTCAGATGAAGGAGC TAGAATTGGAGGACGATTTACTGAATAAGGTGCCTGTTCGGTAAGTCAACATGGATTTGTCAGGTCAAAATTGAT CTTTATGCTATGTAATAATGCCTTCTAAGGAATCTCCGGGCCAAGCTGTACAAAGAATCATATGAATTCGTCCGA CAACAACGAATTCAATGCCTACTCCAGGGTGCCTGGTTCGTTATAGCACTACCCCAGAATGCACCCAGGGAAGTG GTACGACGACCGAAAAGGCCCTGGCGATTTATGCGATTGGTATGTAGTCACATTGAATGAACGGCCGAATAATGT CGCTGTGAACTCAACAATGCCCAACAGGACAGCGGGCTAAAGTACTTACATTACGTTGACAGTGCCGTCAAGTTC CCTGTTCGGAGCGGCCTTGAAGACCTACCCGATCGTATTGATGTCTCCTTGATCAATGATATTGCTACTGGAACA TGTGCTCCTCCACCGAATGTCCTTCGAGGCGACGACGATTTACCCCCCGCTGGCGTACTCTCCCCTTCACCGTTG TCATTCTCACTTTTGAACGCACATGAAGGTTCTCTAGTAGATTTGATCGCTCCTGATCAATCCCGTTGGGCTGAT TGGACAGACGGACTGAATATGCTACGTAAAGATGGTGGGCACGCGCCTTCGACTGAGACGTCAAGTTTTGTGCAG GCGCTCACAGAGATCGGGTTGAAGATCAAATTGTTAGGTAAGATTTATGTTGGTCTCGATGGATGGAGTAAATAT TTGATTAACATCTGTACAGATCTGTCAGGTGAAATGGTCGAGATACCCACAAACCTTACAGCTGGCCCTCCACCT ACTGATACCAATTTTTTCTTTTCGGAATCCCTGCTATAA

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