Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|091290
Gene name
Locationscaffold_6:788261..789961
Strand-
Gene length (bp)1700
Transcript length (bp)1272
Coding sequence length (bp)1272
Protein length (aa) 424

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13424 TPR_12 Tetratricopeptide repeat 3.0E-07 40 83
PF10516 SHNi-TPR SHNi-TPR 4.5E-11 189 224

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9USQ4|SIM3_SCHPO NASP-related protein sim3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sim3 PE=1 SV=1 29 381 2.0E-29
sp|Q02508|HGV2_HALRO Protein HGV2 OS=Halocynthia roretzi GN=HGV2 PE=2 SV=1 153 273 7.0E-12
sp|P06180|HIBN_XENLA Histone-binding protein N1/N2 OS=Xenopus laevis PE=1 SV=3 157 277 1.0E-11
sp|Q66HD3|NASP_RAT Nuclear autoantigenic sperm protein OS=Rattus norvegicus GN=Nasp PE=1 SV=1 148 273 6.0E-11
sp|Q2T9P4|NASP_BOVIN Nuclear autoantigenic sperm protein OS=Bos taurus GN=NASP PE=2 SV=2 148 269 1.0E-10
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9USQ4|SIM3_SCHPO NASP-related protein sim3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sim3 PE=1 SV=1 29 381 2.0E-29
sp|Q02508|HGV2_HALRO Protein HGV2 OS=Halocynthia roretzi GN=HGV2 PE=2 SV=1 153 273 7.0E-12
sp|P06180|HIBN_XENLA Histone-binding protein N1/N2 OS=Xenopus laevis PE=1 SV=3 157 277 1.0E-11
sp|Q66HD3|NASP_RAT Nuclear autoantigenic sperm protein OS=Rattus norvegicus GN=Nasp PE=1 SV=1 148 273 6.0E-11
sp|Q2T9P4|NASP_BOVIN Nuclear autoantigenic sperm protein OS=Bos taurus GN=NASP PE=2 SV=2 148 269 1.0E-10
sp|Q99MD9|NASP_MOUSE Nuclear autoantigenic sperm protein OS=Mus musculus GN=Nasp PE=1 SV=2 148 271 1.0E-10
sp|P27123|NASP_RABIT Nuclear autoantigenic sperm protein (Fragment) OS=Oryctolagus cuniculus GN=NASP PE=2 SV=2 149 269 2.0E-10
sp|P49321|NASP_HUMAN Nuclear autoantigenic sperm protein OS=Homo sapiens GN=NASP PE=1 SV=2 148 269 2.0E-10
[Show less]

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.5198 0.8326 0.0559 0.0275 0.0752 0.0023 0.0286 0.0161 0.0337 0.0135

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup4658
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|091290
Agaricus bisporus var bisporus H97 AgabiH97|091290 (this protein)
Rhodonia placenta FPRL280 RhoplFPRL280|390_4

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|091290
MASNEMTTQTPPAPVSNAPNDEINAPTTLESALEQAKRAFALKKYEQAVDFYATALEFATKEHGDDSPLTADLYF
SYGRALLENAVSQSGVLGKEQPEAPVEEEPPVNSVDGPILSFSGDAEEEDPAVDLFASAENAVVEEEKAAAAEEE
EDEPEDDFNAAWEVLDLARAIYDKQVQQDGDDEIRLKLADTYIALGDVSLETEKFDQAIQDYEAGLKHKVDLLPT
SSRQIAEAHYKLSMVLDLTSGRLSDAISHAENALESVEARLVELLHGLSGELPPLPEEPPTDSKGKGKAVTRLVR
DDVIQRMSSQRIEAEIKELTGLRDDLALKVEELKTSPNEILDQSAPALAAQALDKELNMEIKSAILPQVVNDLTG
IVKKKKKVATAETEASDSPSTEANGAKRKAEEEAEASSTEKKARLESS*
Coding >AgabiH97|091290
ATGGCCTCAAACGAAATGACGACCCAAACACCACCGGCACCCGTATCAAACGCGCCAAACGATGAGATAAACGCA
CCAACGACGTTGGAAAGTGCTCTGGAACAGGCCAAACGCGCTTTTGCACTGAAGAAATATGAGCAGGCGGTGGAT
TTTTATGCTACGGCTTTGGAATTTGCGACGAAGGAACATGGAGATGATTCGCCACTGACTGCGGATTTGTATTTC
TCCTATGGGCGCGCCCTGCTTGAGAATGCGGTTTCTCAAAGTGGAGTGCTTGGCAAAGAGCAGCCCGAGGCTCCT
GTGGAAGAGGAACCTCCAGTCAACTCTGTTGATGGTCCAATTTTATCATTTTCGGGAGACGCGGAAGAGGAAGAT
CCTGCAGTTGACTTATTTGCAAGTGCGGAGAATGCTGTTGTAGAAGAAGAAAAGGCTGCTGCTGCGGAAGAAGAA
GAGGATGAACCTGAAGATGATTTCAATGCTGCTTGGGAAGTTCTGGACCTTGCTCGAGCTATTTATGATAAGCAG
GTGCAGCAGGATGGAGATGATGAAATAAGACTTAAATTGGCAGACACTTACATTGCCTTGGGCGATGTCTCGCTG
GAAACGGAAAAATTCGACCAGGCGATCCAAGATTATGAAGCGGGTCTCAAGCACAAAGTTGATCTCCTTCCAACA
TCCTCTCGTCAGATAGCCGAAGCGCACTATAAGCTTAGTATGGTGCTGGATCTTACCTCCGGGCGTCTATCAGAT
GCCATTTCTCATGCGGAAAATGCCCTCGAAAGTGTTGAGGCAAGGTTGGTAGAACTTCTGCATGGGTTGAGTGGT
GAACTGCCACCTCTTCCTGAAGAACCACCTACAGACTCGAAAGGCAAAGGAAAGGCTGTCACCAGGCTTGTAAGG
GACGATGTGATACAGCGGATGTCTAGTCAGCGGATAGAAGCCGAAATTAAGGAGTTGACAGGATTAAGGGATGAT
TTAGCTTTGAAGGTTGAAGAACTTAAGACGTCACCGAATGAAATTCTGGACCAGAGTGCACCTGCACTTGCGGCT
CAAGCTCTTGACAAAGAATTGAACATGGAGATAAAGTCCGCCATTTTGCCTCAGGTCGTGAACGACCTGACCGGT
ATCGTCAAAAAGAAAAAGAAAGTGGCAACAGCCGAAACCGAGGCCTCTGATAGCCCATCCACGGAAGCGAATGGT
GCAAAGAGAAAGGCAGAAGAGGAAGCGGAGGCGTCAAGTACGGAAAAGAAGGCCAGACTGGAGTCGTCATAA
Transcript >AgabiH97|091290
ATGGCCTCAAACGAAATGACGACCCAAACACCACCGGCACCCGTATCAAACGCGCCAAACGATGAGATAAACGCA
CCAACGACGTTGGAAAGTGCTCTGGAACAGGCCAAACGCGCTTTTGCACTGAAGAAATATGAGCAGGCGGTGGAT
TTTTATGCTACGGCTTTGGAATTTGCGACGAAGGAACATGGAGATGATTCGCCACTGACTGCGGATTTGTATTTC
TCCTATGGGCGCGCCCTGCTTGAGAATGCGGTTTCTCAAAGTGGAGTGCTTGGCAAAGAGCAGCCCGAGGCTCCT
GTGGAAGAGGAACCTCCAGTCAACTCTGTTGATGGTCCAATTTTATCATTTTCGGGAGACGCGGAAGAGGAAGAT
CCTGCAGTTGACTTATTTGCAAGTGCGGAGAATGCTGTTGTAGAAGAAGAAAAGGCTGCTGCTGCGGAAGAAGAA
GAGGATGAACCTGAAGATGATTTCAATGCTGCTTGGGAAGTTCTGGACCTTGCTCGAGCTATTTATGATAAGCAG
GTGCAGCAGGATGGAGATGATGAAATAAGACTTAAATTGGCAGACACTTACATTGCCTTGGGCGATGTCTCGCTG
GAAACGGAAAAATTCGACCAGGCGATCCAAGATTATGAAGCGGGTCTCAAGCACAAAGTTGATCTCCTTCCAACA
TCCTCTCGTCAGATAGCCGAAGCGCACTATAAGCTTAGTATGGTGCTGGATCTTACCTCCGGGCGTCTATCAGAT
GCCATTTCTCATGCGGAAAATGCCCTCGAAAGTGTTGAGGCAAGGTTGGTAGAACTTCTGCATGGGTTGAGTGGT
GAACTGCCACCTCTTCCTGAAGAACCACCTACAGACTCGAAAGGCAAAGGAAAGGCTGTCACCAGGCTTGTAAGG
GACGATGTGATACAGCGGATGTCTAGTCAGCGGATAGAAGCCGAAATTAAGGAGTTGACAGGATTAAGGGATGAT
TTAGCTTTGAAGGTTGAAGAACTTAAGACGTCACCGAATGAAATTCTGGACCAGAGTGCACCTGCACTTGCGGCT
CAAGCTCTTGACAAAGAATTGAACATGGAGATAAAGTCCGCCATTTTGCCTCAGGTCGTGAACGACCTGACCGGT
ATCGTCAAAAAGAAAAAGAAAGTGGCAACAGCCGAAACCGAGGCCTCTGATAGCCCATCCACGGAAGCGAATGGT
GCAAAGAGAAAGGCAGAAGAGGAAGCGGAGGCGTCAAGTACGGAAAAGAAGGCCAGACTGGAGTCGTCATAA
Gene >AgabiH97|091290
ATGGCCTCGTGCGTAATTCATTGTATTTCTATGATCGCGCTGTACACGAATGCTCTTGTCACAGAAACGAAATGA
CGACCCAAACACCACCGGCACCCGTATCAAACGCGCCAAACGATGAGATAAACGCACCAACGACGTTGGAAAGTG
CTCTGGAACAGGCCAAACGCGCTTTTGCACTGAAGAAATATGAGCAGGCGGTGGATTTTTATGCTACGGCTTTGG
AATTTGCGTGAGTTGCTTTTGTGAATCCATCCTTTTTTCTCCTTGCGTGAACGAGGTCAAAGGGCGTCATGCTAT
TGTTCCTTGCCACAGTATCGTGCACATTTGACGCGTCCCAGCTTCTTCCCTTCAATTTCTATCGTACGGGCATAC
CTTTTACACGTATGCTGACCCGAAATTCTGCGAATCTTCCAGGACGAAGGAACATGGAGATGATTCGCCACTGAC
TGCGGATTTGTATTTCTCCTATGGGCGCGCCCTGCTTGAGAATGCGGTTTCTCAAAGTGGAGTGCTTGGCAAAGA
GCAGCCCGAGGCTCCTGTGGAAGAGGAACCTCCAGGTGCGTGTATTTTAGCCAACTGTCATCGTTTTTCGCCAAC
TTGAAGTCTCAAAATTGTTTCTGATTTCCGCAGTCAACTCTGTTGATGGTCCAATTTTATCATTTTCGGGAGACG
CGGAAGAGGAAGATCCTGCAGTTGACTTATTTGCAAGTGCGGAGAATGCTGTTGTAGAAGAAGAAAAGGCTGCTG
CTGCGGAAGAAGAAGAGGATGAACCTGAAGATGATTTCAATGCTGCTTGGGAAGTTCTGGACCTTGCTCGAGCTA
TTTATGATAAGCAGGTGCAGCAGGATGGAGATGATGAAATAAGACTTAAATTGGCAGACACTTACATTGCCTTGG
GCGATGTCTCGCTGGAAACGGGTAGGTGATAAACTTTCCCCCTTACTTAATGTGCAATGACACTAAAAGGTTTGT
ATAGAAAAATTCGACCAGGCGATCCAAGATTATGAAGCGGGTCTCAAGCACAAAGTTGATCTCCTTCCAACATCC
TCTCGTCAGATAGCCGAAGCGCACTATAAGCTTAGTATGGTGCTGGATCTTACCTCCGGGCGTCTATCAGATGCC
ATTTCTCATGCGGAAAATGCCCTCGAAAGTGTTGAGGCAAGGTTGGTAGAACTTCTGCATGGGTTGAGTGGTGAA
CTGCCACCTCTTCCTGAAGAACCACCTACAGACTCGAAAGGCAAAGGAAAGGCTGTCACCAGGCTTGTAAGGGAC
GATGTGATACAGCGGATGTCTAGTCAGCGGATAGAAGCCGAAATTAAGGAGTTGACAGGATTAAGGGATGATTTA
GCTTTGAAGGTTAGTAATAAACTGCAGTCGGCAGTTTACTGTGTCTTTTCTAATTAGATTCTTAGGTTGAAGAAC
TTAAGACGTCACCGAATGAAATTCTGGACCAGAGTGCACCTGCACTTGCGGCTCAAGCTCTTGACAAAGAATTGA
ACATGGAGATAAAGTCCGCCATTTTGCCTCAGGTCGTGAACGACCTGACCGGTATCGTCAAAAAGAAAAAGAAAG
TGGCAACAGCCGAAACCGAGGCCTCTGATAGCCCATCCACGGAAGCGAATGGTGCAAAGAGAAAGGCAGAAGAGG
AAGCGGAGGCGTCAAGTACGGAAAAGAAGGCCAGACTGGAGTCGTCATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail