Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|090320
Gene name
Location	scaffold_6:537367..538531
Strand	+
Gene length (bp)	1164
Transcript length (bp)	990
Coding sequence length (bp)	990
Protein length (aa)	330

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 30	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	10	32	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|090320 MVAVSSRFSLLVTLCTVAVLSFNPLLVGAAVIDTRHSNQPSTFERDRHGVKQQVIPLPSTFNKAHSEAPTRAPLG EHGRVRKGKGKEQGRSVEQLPADQLMRVVQLPVRPYRRHHDDDCPKKVVVNGDRDHLHLVCHDGHDYDHVRTRRE LLRRSPRHSRPIVQPRSDPATPSTKPEAVLGTVEVVGPDGPNGQNKAFGEFLVENRNGDYDVGVSSTNQTMFFMV AAPSLVNGVIGSLPVPLSSLPIGSLPLGSLPLGSLPIDPSQLPVPGVGSLPVGLGSLPAGIGSLPAGLGSLPIGA PSSPGQPPSPGQPPVQSPLGQLPLLGQES*
Coding	>AgabiH97\|090320 ATGGTCGCTGTCAGCTCTCGTTTTTCTCTTCTCGTTACCCTGTGTACGGTTGCTGTCCTCTCCTTCAACCCGTTA TTGGTTGGCGCTGCGGTAATCGATACTCGTCATTCCAACCAGCCATCCACTTTCGAACGCGATAGGCATGGCGTG AAGCAACAAGTCATCCCCCTACCTAGCACGTTCAACAAAGCCCATTCCGAGGCCCCTACACGGGCCCCTCTAGGA GAACATGGCCGAGTTCGTAAAGGGAAGGGCAAAGAACAAGGAAGAAGCGTCGAACAATTACCCGCTGATCAATTG ATGCGTGTTGTCCAATTGCCAGTGAGACCGTACAGGCGGCATCACGACGACGATTGTCCCAAAAAGGTGGTTGTG AACGGCGACCGGGACCATCTTCATTTGGTTTGCCATGACGGGCACGACTACGATCACGTCCGTACCCGCCGAGAA TTACTACGTCGCTCGCCTAGGCACTCGCGGCCAATCGTTCAACCTCGAAGTGACCCTGCAACACCCAGCACTAAG CCCGAAGCTGTCTTGGGAACCGTGGAGGTTGTGGGGCCAGATGGACCAAATGGCCAGAATAAAGCTTTTGGAGAG TTCCTGGTCGAAAATCGGAACGGTGATTACGACGTTGGTGTTTCGAGCACGAACCAGACTATGTTCTTCATGGTC GCCGCCCCCTCCTTAGTCAATGGCGTCATCGGTTCGCTTCCCGTCCCCCTTAGCTCACTTCCTATCGGGTCACTC CCTCTTGGGTCGCTTCCTCTCGGGTCGCTTCCCATCGATCCTAGTCAACTTCCTGTGCCCGGCGTTGGTTCACTT CCTGTCGGTCTTGGATCACTTCCCGCCGGTATTGGGTCACTTCCCGCCGGTCTTGGATCACTTCCCATCGGTGCA CCTTCCAGTCCCGGTCAACCTCCCAGTCCCGGTCAACCGCCTGTTCAATCACCTCTGGGTCAACTTCCTCTCCTT GGGCAAGAATCCTGA
Transcript	>AgabiH97\|090320 ATGGTCGCTGTCAGCTCTCGTTTTTCTCTTCTCGTTACCCTGTGTACGGTTGCTGTCCTCTCCTTCAACCCGTTA TTGGTTGGCGCTGCGGTAATCGATACTCGTCATTCCAACCAGCCATCCACTTTCGAACGCGATAGGCATGGCGTG AAGCAACAAGTCATCCCCCTACCTAGCACGTTCAACAAAGCCCATTCCGAGGCCCCTACACGGGCCCCTCTAGGA GAACATGGCCGAGTTCGTAAAGGGAAGGGCAAAGAACAAGGAAGAAGCGTCGAACAATTACCCGCTGATCAATTG ATGCGTGTTGTCCAATTGCCAGTGAGACCGTACAGGCGGCATCACGACGACGATTGTCCCAAAAAGGTGGTTGTG AACGGCGACCGGGACCATCTTCATTTGGTTTGCCATGACGGGCACGACTACGATCACGTCCGTACCCGCCGAGAA TTACTACGTCGCTCGCCTAGGCACTCGCGGCCAATCGTTCAACCTCGAAGTGACCCTGCAACACCCAGCACTAAG CCCGAAGCTGTCTTGGGAACCGTGGAGGTTGTGGGGCCAGATGGACCAAATGGCCAGAATAAAGCTTTTGGAGAG TTCCTGGTCGAAAATCGGAACGGTGATTACGACGTTGGTGTTTCGAGCACGAACCAGACTATGTTCTTCATGGTC GCCGCCCCCTCCTTAGTCAATGGCGTCATCGGTTCGCTTCCCGTCCCCCTTAGCTCACTTCCTATCGGGTCACTC CCTCTTGGGTCGCTTCCTCTCGGGTCGCTTCCCATCGATCCTAGTCAACTTCCTGTGCCCGGCGTTGGTTCACTT CCTGTCGGTCTTGGATCACTTCCCGCCGGTATTGGGTCACTTCCCGCCGGTCTTGGATCACTTCCCATCGGTGCA CCTTCCAGTCCCGGTCAACCTCCCAGTCCCGGTCAACCGCCTGTTCAATCACCTCTGGGTCAACTTCCTCTCCTT GGGCAAGAATCCTGA
Gene	>AgabiH97\|090320 ATGGTCGCTGTCAGCTCTCGTTTTTCTCTTCTCGTTACCCTGTGTACGGTTGCTGTCCTCTCCTTCAACCCGTTA TTGGTTGGCGCTGCGGTAATCGATACTCGTCATTCCAACCAGCCATCCACTTTCGAACGCGATAGGCATGGCGTG AAGCAACAAGTCATCCCCCTACCTAGCACGTTCAACAAAGCCCATTCCGAGGCCCCTACACGGGCCCCTCTAGGA GAACATGGCCGAGTTCGTAAAGGGAAGGGCAAAGAACAAGGAGTTGGTGACATTTCAGCGCATATAGTCACCATT TGAACTGACGAAATGACAGAGAAGCGTCGAACAATTACCCGCTGATCAATTGATGCGTGTTGTCCAATTGCCAGT GAGACCGTACAGGCGGCATCACGACGACGATTGTCCCAAAAAGGTGGTTGTGAACGGCGACCGGGACCATCTTCA TTTGGTTTGCCATGACGGGCACGACTACGATCACGTCCGTACCCGCCGAGAATTACTACGTCGCTCGCCTAGGCA CTCGCGGCCAATCGTTCAACCTCGAAGTGACCCTGCAACACCCAGCACTAAGCCCGAAGCTGTCTTGGGAACCGT GGAGGTTGTGGTAAGCCATTCCGCTGTTTATATCTCGCAAAGTCTTTTAAAATGCATGCATTTATAGGGGCCAGA TGGACCAAATGGCCAGAATAAAGCTTTTGGAGAGTTCCTGGTCGAAAATCGGAACGGTGATTACGACGTTGGTGT TTCGAGCACGAACCAGACTATGTTCTTCATGGTCGCCGCCCCCTCCTTAGTCAATGGCGTCATCGGTTCGCTTCC CGTCCCCCTTAGCTCACTTCCTATCGGGTCACTCCCTCTTGGGTCGCTTCCTCTCGGGTCGCTTCCCATCGATCC TAGTCAACTTCCTGTGCCCGGCGTTGGTTCACTTCCTGTCGGTCTTGGATCACTTCCCGCCGGTATTGGGTCACT TCCCGCCGGTCTTGGATCACTTCCCATCGGTGCACCTTCCAGTCCCGGTCAACCTCCCAGTCCCGGTCAACCGCC TGTTCAATCACCTCTGGGTCAACTTCCTCTCCTTGGGCAAGTTCGCGTTACTCTTCAAACCAAGCTAGCCGACCG ATCGGAATGGTCTTGCTGCTCATATGAAAGGAATCCTGA

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