© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|087190 |
| Gene name | |
| Location | scaffold_5:2227673..2228672 |
| Strand | - |
| Gene length (bp) | 999 |
| Transcript length (bp) | 885 |
| Coding sequence length (bp) | 885 |
| Protein length (aa) | 295 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13489 | Methyltransf_23 | Methyltransferase domain | 1.0E-11 | 44 | 214 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 1.8E-08 | 62 | 156 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 9.1E-07 | 57 | 164 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 5.4E-05 | 63 | 158 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 42 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|087190 MSGATASSNSRFYISEASDHKYVLPSDNEEKRRLDIQSKAVNELFDNKLIRAPIELKEGDTVLDSGTGSGHWLLS LSKQVPSTIKLIGIDISSQIFPSPETTPPNATFTQLSITSLPPSWSNTITLIHQRLLLAALQLPEWKIAVNSMYR SLVPGGYVQLFEPIADFISPSEEIRNHKAWAIRANLVAGIRNIDLNVIQRIPAWLEEAGFVDVQIEKRGLPLGSW GGDLGKWGLEASMGFWPAMKDAFMKVDKSGLVANEEEYDEVVKDLRKKCDETPDTYFEYWVFVARKPVV* |
| Coding | >AgabiH97|087190 ATGAGTGGTGCAACCGCGAGTAGTAATTCGAGGTTTTACATCTCCGAGGCCTCTGATCATAAATATGTTCTACCG TCGGACAATGAAGAAAAACGCCGTCTTGATATACAGAGCAAAGCAGTAAATGAGCTATTTGATAACAAACTTATC CGGGCACCCATCGAACTCAAAGAGGGAGATACCGTTCTCGACAGCGGTACAGGTTCAGGACATTGGTTACTCTCC CTATCCAAACAAGTCCCTTCGACAATAAAGTTAATTGGAATCGATATCTCATCTCAGATATTTCCTTCTCCTGAA ACCACACCTCCCAACGCGACTTTCACTCAACTTTCAATAACATCCCTCCCACCAAGTTGGTCAAACACCATAACT CTCATTCATCAGCGTCTCCTTCTCGCAGCGCTCCAACTTCCTGAATGGAAAATTGCCGTCAACTCGATGTATCGG AGTCTAGTTCCAGGAGGCTATGTCCAATTATTCGAACCCATAGCGGATTTTATCTCACCTTCCGAAGAAATACGT AATCATAAAGCTTGGGCAATCAGAGCAAATCTAGTCGCAGGCATCCGAAACATCGATTTGAACGTCATCCAACGA ATTCCCGCATGGCTCGAAGAAGCCGGATTTGTAGATGTTCAAATCGAGAAGAGGGGATTACCTCTAGGTTCTTGG GGTGGTGATCTCGGCAAATGGGGGTTGGAAGCCTCGATGGGATTTTGGCCGGCGATGAAAGATGCGTTTATGAAA GTTGATAAATCTGGGTTGGTTGCGAATGAGGAGGAATATGATGAAGTTGTGAAGGATTTAAGAAAGAAGTGTGAC GAAACGCCTGATACTTATTTTGAATATTGGGTTTTTGTTGCGCGGAAACCTGTTGTATGA |
| Transcript | >AgabiH97|087190 ATGAGTGGTGCAACCGCGAGTAGTAATTCGAGGTTTTACATCTCCGAGGCCTCTGATCATAAATATGTTCTACCG TCGGACAATGAAGAAAAACGCCGTCTTGATATACAGAGCAAAGCAGTAAATGAGCTATTTGATAACAAACTTATC CGGGCACCCATCGAACTCAAAGAGGGAGATACCGTTCTCGACAGCGGTACAGGTTCAGGACATTGGTTACTCTCC CTATCCAAACAAGTCCCTTCGACAATAAAGTTAATTGGAATCGATATCTCATCTCAGATATTTCCTTCTCCTGAA ACCACACCTCCCAACGCGACTTTCACTCAACTTTCAATAACATCCCTCCCACCAAGTTGGTCAAACACCATAACT CTCATTCATCAGCGTCTCCTTCTCGCAGCGCTCCAACTTCCTGAATGGAAAATTGCCGTCAACTCGATGTATCGG AGTCTAGTTCCAGGAGGCTATGTCCAATTATTCGAACCCATAGCGGATTTTATCTCACCTTCCGAAGAAATACGT AATCATAAAGCTTGGGCAATCAGAGCAAATCTAGTCGCAGGCATCCGAAACATCGATTTGAACGTCATCCAACGA ATTCCCGCATGGCTCGAAGAAGCCGGATTTGTAGATGTTCAAATCGAGAAGAGGGGATTACCTCTAGGTTCTTGG GGTGGTGATCTCGGCAAATGGGGGTTGGAAGCCTCGATGGGATTTTGGCCGGCGATGAAAGATGCGTTTATGAAA GTTGATAAATCTGGGTTGGTTGCGAATGAGGAGGAATATGATGAAGTTGTGAAGGATTTAAGAAAGAAGTGTGAC GAAACGCCTGATACTTATTTTGAATATTGGGTTTTTGTTGCGCGGAAACCTGTTGTATGA |
| Gene | >AgabiH97|087190 ATGAGTGGTGCAACCGCGAGTAGTAATTCGAGGTTTTACATCTCCGAGGCCTCTGATCATAAATATGTTCTACCG TCGGACAATGAAGAAAAACGCCGGTAAGCTTTTTGAAATACGTATAATGAAAGAACCTTAATTTTTTCTTTTGTC AAGTCTTGATATACAGAGCAAAGCAGTAAATGAGCTATTTGATAACAAACTTATCCGGGCACCCATCGAACTCAA AGAGGGAGATACCGTTCTCGACAGCGGTACAGGTTCAGGTATTGTCATTCCTAAAGAAAAAAGTCGTCCGTCCTA GAATGCTAAAAACAGATACCAGGACATTGGTTACTCTCCCTATCCAAACAAGTCCCTTCGACAATAAAGTTAATT GGAATCGATATCTCATCTCAGATATTTCCTTCTCCTGAAACCACACCTCCCAACGCGACTTTCACTCAACTTTCA ATAACATCCCTCCCACCAAGTTGGTCAAACACCATAACTCTCATTCATCAGCGTCTCCTTCTCGCAGCGCTCCAA CTTCCTGAATGGAAAATTGCCGTCAACTCGATGTATCGGAGTCTAGTTCCAGGAGGCTATGTCCAATTATTCGAA CCCATAGCGGATTTTATCTCACCTTCCGAAGAAATACGTAATCATAAAGCTTGGGCAATCAGAGCAAATCTAGTC GCAGGCATCCGAAACATCGATTTGAACGTCATCCAACGAATTCCCGCATGGCTCGAAGAAGCCGGATTTGTAGAT GTTCAAATCGAGAAGAGGGGATTACCTCTAGGTTCTTGGGGTGGTGATCTCGGCAAATGGGGGTTGGAAGCCTCG ATGGGATTTTGGCCGGCGATGAAAGATGCGTTTATGAAAGTTGATAAATCTGGGTTGGTTGCGAATGAGGAGGAA TATGATGAAGTTGTGAAGGATTTAAGAAAGAAGTGTGACGAAACGCCTGATACTTATTTTGAATATTGGGTTTTT GTTGCGCGGAAACCTGTTGTATGA |