Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|086860
Gene name
Locationscaffold_5:2137473..2139097
Strand-
Gene length (bp)1624
Transcript length (bp)1572
Coding sequence length (bp)1572
Protein length (aa) 524

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02992 Transposase_21 Transposase family tnp2 2.9E-21 418 522

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|086860
MASQSTGTVICTCGCNKLVSYPTRRAHVAQTRTEESSTSRTVGNKRPHSDFPGDHSAGPGNKRRHTVGPESNEIF
NIDNPSGNHDYQTPSTPTTSPSRPVRVAEINNRTLLLRWGDHLTRPASYPQLGQATNNLEDNELGRNGGDVSATY
PMEYTDEDEINDEGEAGGEEDGTSDGESEVEEGQSEGESQDEDAHEDEDADEGEDADEDEDADEEEEEEGSGIDE
GEESRPSNADIAVISLWDHIDKDYVRFMMTTDESLGDTDLSLLRKYVLKVEDHLTERTFERLAFAFPGASHSSLK
ITKKHVRLLSGFQPIPYSCCINSCVCYTGPYANLTECPHCQELRLDDRNRPRKVFDYIPLIPRLRAMAANRQHAE
KMRYRARFEHQPGVVSDIFDGLHYQSLLTRVVPASGDQPFFYFTDERDIALGLSTDGFGPFKRCDKTCWPVILFN
YNLPPDIRFQKQYCINVGTIPGPKKPWDMDSFLWPLMQELIQLEVGVRAFDGITKSLFLLHAYLLLVFGDIPV*
Coding >AgabiH97|086860
ATGGCGTCCCAAAGTACTGGTACAGTCATATGCACATGTGGCTGTAACAAACTTGTTTCTTATCCCACAAGACGA
GCGCATGTTGCACAAACCCGAACAGAAGAGTCATCAACTAGCCGTACCGTTGGAAACAAGAGGCCCCACTCAGAT
TTTCCTGGAGACCACAGCGCAGGACCAGGGAATAAAAGGAGGCACACCGTTGGGCCTGAATCCAATGAAATCTTC
AACATCGACAATCCATCAGGCAACCATGACTATCAGACTCCTAGCACACCCACTACATCTCCCAGTCGACCGGTT
CGCGTCGCAGAAATCAACAACCGTACACTTTTGTTGCGATGGGGAGACCACCTTACTCGCCCTGCCAGCTACCCT
CAGCTAGGGCAAGCCACCAATAACCTGGAAGATAATGAGCTGGGAAGGAACGGCGGTGATGTTTCAGCGACGTAC
CCCATGGAATATACCGATGAAGATGAGATCAATGATGAAGGCGAGGCCGGGGGTGAAGAAGATGGGACTAGCGAT
GGTGAAAGTGAAGTTGAGGAGGGTCAAAGTGAGGGTGAGAGTCAAGATGAAGACGCCCATGAAGATGAAGACGCC
GATGAAGGTGAAGACGCCGATGAAGATGAAGACGCAGATGAAGAGGAAGAGGAAGAAGGGTCTGGGATTGATGAA
GGCGAAGAAAGTCGGCCAAGTAACGCGGATATTGCTGTGATCTCACTTTGGGATCACATCGATAAAGATTATGTT
CGTTTTATGATGACAACAGACGAGTCCCTGGGTGATACCGACCTCTCTTTATTACGCAAATATGTCCTCAAAGTT
GAGGACCACCTGACGGAGCGAACCTTCGAACGACTTGCCTTTGCTTTTCCGGGTGCTTCTCACAGCTCACTCAAG
ATAACCAAGAAGCATGTTCGCTTGCTCTCGGGTTTTCAACCTATACCATACAGCTGTTGTATCAACAGCTGCGTC
TGCTACACTGGTCCATACGCCAATCTCACTGAATGCCCTCACTGTCAGGAGCTCAGGCTGGATGATCGGAATAGA
CCCCGCAAGGTGTTTGATTACATCCCTCTAATTCCACGCCTTCGAGCCATGGCTGCAAATCGTCAACACGCCGAA
AAAATGCGCTACCGGGCCAGATTTGAACACCAGCCTGGAGTCGTGTCAGATATTTTTGATGGGCTTCACTATCAG
TCATTGCTGACCAGAGTCGTACCTGCGAGTGGTGACCAACCGTTTTTCTACTTCACTGATGAACGCGATATTGCT
CTTGGTCTCTCCACCGATGGCTTTGGTCCGTTTAAGCGATGTGACAAGACGTGCTGGCCAGTCATTCTCTTTAAC
TACAATCTTCCCCCCGACATACGTTTTCAAAAGCAATATTGTATCAATGTGGGGACAATCCCAGGCCCTAAGAAG
CCCTGGGACATGGACTCGTTTCTCTGGCCGCTTATGCAGGAGCTAATTCAACTTGAAGTTGGAGTTAGGGCTTTT
GACGGAATCACTAAATCACTCTTTTTACTCCATGCTTATCTTCTTTTGGTTTTTGGTGATATTCCGGTGTAG
Transcript >AgabiH97|086860
ATGGCGTCCCAAAGTACTGGTACAGTCATATGCACATGTGGCTGTAACAAACTTGTTTCTTATCCCACAAGACGA
GCGCATGTTGCACAAACCCGAACAGAAGAGTCATCAACTAGCCGTACCGTTGGAAACAAGAGGCCCCACTCAGAT
TTTCCTGGAGACCACAGCGCAGGACCAGGGAATAAAAGGAGGCACACCGTTGGGCCTGAATCCAATGAAATCTTC
AACATCGACAATCCATCAGGCAACCATGACTATCAGACTCCTAGCACACCCACTACATCTCCCAGTCGACCGGTT
CGCGTCGCAGAAATCAACAACCGTACACTTTTGTTGCGATGGGGAGACCACCTTACTCGCCCTGCCAGCTACCCT
CAGCTAGGGCAAGCCACCAATAACCTGGAAGATAATGAGCTGGGAAGGAACGGCGGTGATGTTTCAGCGACGTAC
CCCATGGAATATACCGATGAAGATGAGATCAATGATGAAGGCGAGGCCGGGGGTGAAGAAGATGGGACTAGCGAT
GGTGAAAGTGAAGTTGAGGAGGGTCAAAGTGAGGGTGAGAGTCAAGATGAAGACGCCCATGAAGATGAAGACGCC
GATGAAGGTGAAGACGCCGATGAAGATGAAGACGCAGATGAAGAGGAAGAGGAAGAAGGGTCTGGGATTGATGAA
GGCGAAGAAAGTCGGCCAAGTAACGCGGATATTGCTGTGATCTCACTTTGGGATCACATCGATAAAGATTATGTT
CGTTTTATGATGACAACAGACGAGTCCCTGGGTGATACCGACCTCTCTTTATTACGCAAATATGTCCTCAAAGTT
GAGGACCACCTGACGGAGCGAACCTTCGAACGACTTGCCTTTGCTTTTCCGGGTGCTTCTCACAGCTCACTCAAG
ATAACCAAGAAGCATGTTCGCTTGCTCTCGGGTTTTCAACCTATACCATACAGCTGTTGTATCAACAGCTGCGTC
TGCTACACTGGTCCATACGCCAATCTCACTGAATGCCCTCACTGTCAGGAGCTCAGGCTGGATGATCGGAATAGA
CCCCGCAAGGTGTTTGATTACATCCCTCTAATTCCACGCCTTCGAGCCATGGCTGCAAATCGTCAACACGCCGAA
AAAATGCGCTACCGGGCCAGATTTGAACACCAGCCTGGAGTCGTGTCAGATATTTTTGATGGGCTTCACTATCAG
TCATTGCTGACCAGAGTCGTACCTGCGAGTGGTGACCAACCGTTTTTCTACTTCACTGATGAACGCGATATTGCT
CTTGGTCTCTCCACCGATGGCTTTGGTCCGTTTAAGCGATGTGACAAGACGTGCTGGCCAGTCATTCTCTTTAAC
TACAATCTTCCCCCCGACATACGTTTTCAAAAGCAATATTGTATCAATGTGGGGACAATCCCAGGCCCTAAGAAG
CCCTGGGACATGGACTCGTTTCTCTGGCCGCTTATGCAGGAGCTAATTCAACTTGAAGTTGGAGTTAGGGCTTTT
GACGGAATCACTAAATCACTCTTTTTACTCCATGCTTATCTTCTTTTGGTTTTTGGTGATATTCCGGTGTAG
Gene >AgabiH97|086860
ATGGCGTCCCAAAGTACTGGTACAGTCATATGCACATGTGGCTGTAACAAACTTGTTTCTTATCCCACAAGACGA
GCGCATGTTGCACAAACCCGAACAGAAGAGTCATCAACTAGCCGTACCGTTGGAAACAAGAGGCCCCACTCAGAT
TTTCCTGGAGACCACAGCGCAGGACCAGGGAATAAAAGGAGGCACACCGTTGGGCCTGAATCCAATGAAATCTTC
AACATCGACAATCCATCAGGCAACCATGACTATCAGACTCCTAGCACACCCACTACATCTCCCAGTCGACCGGTT
CGCGTCGCAGAAATCAACAACCGTACACTTTTGTTGCGATGGGGAGACCACCTTACTCGCCCTGCCAGCTACCCT
CAGCTAGGGCAAGCCACCAATAACCTGGAAGATAATGAGCTGGGAAGGAACGGCGGTGATGTTTCAGCGACGTAC
CCCATGGAATATACCGATGAAGATGAGATCAATGATGAAGGCGAGGCCGGGGGTGAAGAAGATGGGACTAGCGAT
GGTGAAAGTGAAGTTGAGGAGGGTCAAAGTGAGGGTGAGAGTCAAGATGAAGACGCCCATGAAGATGAAGACGCC
GATGAAGGTGAAGACGCCGATGAAGATGAAGACGCAGATGAAGAGGAAGAGGAAGAAGGGTCTGGGATTGATGAA
GGCGAAGAAAGTCGGCCAAGTAACGCGGATATTGCTGTGATCTCACTTTGGGATCACATCGATAAAGATTATGTT
CGTTTTATGATGACAACAGGTGCAGTTTTTTTTCGATTCTTTGGTTGTTTATGTTACTCATCTCATTGTAGACGA
GTCCCTGGGTGATACCGACCTCTCTTTATTACGCAAATATGTCCTCAAAGTTGAGGACCACCTGACGGAGCGAAC
CTTCGAACGACTTGCCTTTGCTTTTCCGGGTGCTTCTCACAGCTCACTCAAGATAACCAAGAAGCATGTTCGCTT
GCTCTCGGGTTTTCAACCTATACCATACAGCTGTTGTATCAACAGCTGCGTCTGCTACACTGGTCCATACGCCAA
TCTCACTGAATGCCCTCACTGTCAGGAGCTCAGGCTGGATGATCGGAATAGACCCCGCAAGGTGTTTGATTACAT
CCCTCTAATTCCACGCCTTCGAGCCATGGCTGCAAATCGTCAACACGCCGAAAAAATGCGCTACCGGGCCAGATT
TGAACACCAGCCTGGAGTCGTGTCAGATATTTTTGATGGGCTTCACTATCAGTCATTGCTGACCAGAGTCGTACC
TGCGAGTGGTGACCAACCGTTTTTCTACTTCACTGATGAACGCGATATTGCTCTTGGTCTCTCCACCGATGGCTT
TGGTCCGTTTAAGCGATGTGACAAGACGTGCTGGCCAGTCATTCTCTTTAACTACAATCTTCCCCCCGACATACG
TTTTCAAAAGCAATATTGTATCAATGTGGGGACAATCCCAGGCCCTAAGAAGCCCTGGGACATGGACTCGTTTCT
CTGGCCGCTTATGCAGGAGCTAATTCAACTTGAAGTTGGAGTTAGGGCTTTTGACGGAATCACTAAATCACTCTT
TTTACTCCATGCTTATCTTCTTTTGGTTTTTGGTGATATTCCGGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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