Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|086810
Gene name
Locationscaffold_5:2126285..2127197
Strand+
Gene length (bp)912
Transcript length (bp)912
Coding sequence length (bp)912
Protein length (aa) 304

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 2.0E-07 167 254
PF13650 Asp_protease_2 Aspartyl protease 3.8E-07 167 256

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|086810
MKPVVELPPLPAKYFKEEKKGPSYKQQAKIEEGISIEEMLEKFGETEIKLSQKELLGMAPKLREALKDLLSKRRV
PTGNNNIVVDRDQEEEEQLDWTYASLNKLGTVQKIQTEAKNKEGNPVKVWEVKEPLTQYLTAVPAEKRERLVFTI
EKEESQSAETMGELRVIPATINGVREEEALLDSGSQIVTMSREAASECKLAWDPSMAINMQSANGGITRTCGLAK
NVPFLFGTITAYLQVHVIEDAPYRVLLGRPFDVLLESKITNSGTGHQFITITDPNTKEWASLATYAKGELPRTLE
TNF*
Coding >AgabiH97|086810
ATGAAACCGGTAGTAGAATTGCCCCCTCTACCAGCTAAGTACTTCAAAGAAGAAAAGAAAGGACCTAGCTACAAG
CAACAAGCAAAGATTGAGGAGGGTATCAGTATCGAAGAAATGTTAGAGAAATTTGGAGAGACTGAGATAAAGCTC
TCGCAAAAAGAGCTTCTAGGAATGGCACCAAAGCTTCGCGAAGCGCTTAAAGATTTACTCAGTAAAAGAAGAGTA
CCCACTGGTAACAACAATATTGTTGTTGATAGGGACCAAGAAGAAGAAGAACAGCTTGATTGGACCTACGCTAGT
CTTAACAAGCTAGGGACGGTACAAAAGATACAGACAGAAGCTAAGAATAAAGAAGGGAACCCAGTGAAAGTTTGG
GAAGTTAAAGAACCTCTGACGCAGTACTTAACAGCGGTACCAGCCGAAAAGCGAGAGAGATTGGTGTTCACCATA
GAAAAAGAGGAGTCTCAGAGCGCCGAGACAATGGGGGAGTTACGCGTAATACCAGCAACCATTAATGGAGTCCGT
GAGGAAGAAGCGTTGTTGGATAGCGGATCTCAGATTGTCACGATGAGTAGAGAGGCTGCTAGTGAATGTAAGCTA
GCATGGGACCCATCTATGGCGATTAATATGCAAAGCGCTAATGGAGGGATCACCCGAACATGTGGGCTAGCTAAG
AATGTTCCCTTCCTCTTCGGAACAATCACGGCGTACCTACAGGTGCATGTTATCGAAGATGCACCTTATCGAGTA
CTACTAGGAAGACCGTTTGACGTTCTACTAGAAAGTAAGATAACGAACTCAGGAACAGGGCACCAGTTCATCACC
ATAACTGACCCGAATACAAAAGAATGGGCCTCGCTAGCTACTTATGCAAAAGGAGAGCTACCGAGGACATTGGAA
ACAAATTTTTAA
Transcript >AgabiH97|086810
ATGAAACCGGTAGTAGAATTGCCCCCTCTACCAGCTAAGTACTTCAAAGAAGAAAAGAAAGGACCTAGCTACAAG
CAACAAGCAAAGATTGAGGAGGGTATCAGTATCGAAGAAATGTTAGAGAAATTTGGAGAGACTGAGATAAAGCTC
TCGCAAAAAGAGCTTCTAGGAATGGCACCAAAGCTTCGCGAAGCGCTTAAAGATTTACTCAGTAAAAGAAGAGTA
CCCACTGGTAACAACAATATTGTTGTTGATAGGGACCAAGAAGAAGAAGAACAGCTTGATTGGACCTACGCTAGT
CTTAACAAGCTAGGGACGGTACAAAAGATACAGACAGAAGCTAAGAATAAAGAAGGGAACCCAGTGAAAGTTTGG
GAAGTTAAAGAACCTCTGACGCAGTACTTAACAGCGGTACCAGCCGAAAAGCGAGAGAGATTGGTGTTCACCATA
GAAAAAGAGGAGTCTCAGAGCGCCGAGACAATGGGGGAGTTACGCGTAATACCAGCAACCATTAATGGAGTCCGT
GAGGAAGAAGCGTTGTTGGATAGCGGATCTCAGATTGTCACGATGAGTAGAGAGGCTGCTAGTGAATGTAAGCTA
GCATGGGACCCATCTATGGCGATTAATATGCAAAGCGCTAATGGAGGGATCACCCGAACATGTGGGCTAGCTAAG
AATGTTCCCTTCCTCTTCGGAACAATCACGGCGTACCTACAGGTGCATGTTATCGAAGATGCACCTTATCGAGTA
CTACTAGGAAGACCGTTTGACGTTCTACTAGAAAGTAAGATAACGAACTCAGGAACAGGGCACCAGTTCATCACC
ATAACTGACCCGAATACAAAAGAATGGGCCTCGCTAGCTACTTATGCAAAAGGAGAGCTACCGAGGACATTGGAA
ACAAATTTTTAA
Gene >AgabiH97|086810
ATGAAACCGGTAGTAGAATTGCCCCCTCTACCAGCTAAGTACTTCAAAGAAGAAAAGAAAGGACCTAGCTACAAG
CAACAAGCAAAGATTGAGGAGGGTATCAGTATCGAAGAAATGTTAGAGAAATTTGGAGAGACTGAGATAAAGCTC
TCGCAAAAAGAGCTTCTAGGAATGGCACCAAAGCTTCGCGAAGCGCTTAAAGATTTACTCAGTAAAAGAAGAGTA
CCCACTGGTAACAACAATATTGTTGTTGATAGGGACCAAGAAGAAGAAGAACAGCTTGATTGGACCTACGCTAGT
CTTAACAAGCTAGGGACGGTACAAAAGATACAGACAGAAGCTAAGAATAAAGAAGGGAACCCAGTGAAAGTTTGG
GAAGTTAAAGAACCTCTGACGCAGTACTTAACAGCGGTACCAGCCGAAAAGCGAGAGAGATTGGTGTTCACCATA
GAAAAAGAGGAGTCTCAGAGCGCCGAGACAATGGGGGAGTTACGCGTAATACCAGCAACCATTAATGGAGTCCGT
GAGGAAGAAGCGTTGTTGGATAGCGGATCTCAGATTGTCACGATGAGTAGAGAGGCTGCTAGTGAATGTAAGCTA
GCATGGGACCCATCTATGGCGATTAATATGCAAAGCGCTAATGGAGGGATCACCCGAACATGTGGGCTAGCTAAG
AATGTTCCCTTCCTCTTCGGAACAATCACGGCGTACCTACAGGTGCATGTTATCGAAGATGCACCTTATCGAGTA
CTACTAGGAAGACCGTTTGACGTTCTACTAGAAAGTAAGATAACGAACTCAGGAACAGGGCACCAGTTCATCACC
ATAACTGACCCGAATACAAAAGAATGGGCCTCGCTAGCTACTTATGCAAAAGGAGAGCTACCGAGGACATTGGAA
ACAAATTTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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