Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|086580
Gene name
Locationscaffold_5:2075916..2078189
Strand-
Gene length (bp)2273
Transcript length (bp)1710
Coding sequence length (bp)1710
Protein length (aa) 570

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16862 Glyco_hydro_79C Glycosyl hydrolase family 79 C-terminal beta domain 4.4E-18 465 565

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|A2QEQ6|GUS79_ASPNC Beta-glucuronidase OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An02g11890 PE=1 SV=1 83 564 2.0E-37
sp|Q7SFB0|GUS79_NEUCR Beta-glucuronidase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU00937 PE=1 SV=1 84 540 3.0E-32

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|086580
MPPFHWPFQFPFSSPVGLEDAADKLTSSFVIDFFIQALPWRYWGWICRCILHFVVTLFAVQSSTTINISIPAPNG
SIQIPRNLIGFSLEQDRWVDWAGLDERNQFFFNVLDNMKAISGEPPIIRIGANSEDHTNFNPDVKSPQLVFPTPN
AVTPFPEARTIVVGNAYYQAVRFLPPDTHVVWGVNFGAKNITAANLEARAIVEAFATPDVKDQGIILDAVEIGNE
ADLYRDNGQRPRNYTPAQYVEEWTEFATNVSTAIGITEDSHTKFWGASFATSSHANTNGFSPQSIFENGLLDSKA
GSFISTITQHHYSGTFCSGGGKLLQDLMTKETIRSNLTSFASDAKAVRDQGLDFVMGETNSYSCHGAPGVSNSAG
AALWTLDYALFSTQIQSSRIYFHEGIGFKYNFFQPIALNRSILDASPLPEPIPPHVQPQYYSAIIALEAIGSHPQ
PRIAELQIEESTVSGYAFYEDSQLVRAVFINLKAFLEGQEEERSKVHLKFDFVGGEVGEEVTLKRLDIAHADDTD
GLTWGGQSYETSDGRVSGTLKTEKVKLNAGFDIRDTEVVLVTFS*
Coding >AgabiH97|086580
ATGCCACCTTTCCACTGGCCATTTCAGTTTCCTTTTTCCTCTCCTGTAGGTCTAGAAGATGCAGCGGATAAGTTA
ACTTCTTCCTTCGTGATCGACTTTTTCATACAAGCTCTTCCTTGGCGATATTGGGGTTGGATCTGTAGATGTATC
CTCCATTTCGTAGTCACTTTGTTTGCTGTTCAGTCGTCAACAACAATCAACATTTCGATTCCTGCACCGAATGGG
TCGATTCAAATTCCACGGAATTTAATTGGGTTTTCTTTGGAACAAGATCGATGGGTTGATTGGGCTGGTCTTGAT
GAACGGAATCAGTTCTTTTTCAATGTTCTTGATAACATGAAGGCAATATCTGGAGAACCCCCGATAATACGCATT
GGGGCAAATAGTGAAGACCATACGAATTTCAATCCGGATGTCAAGTCACCTCAACTTGTTTTTCCTACACCTAAC
GCTGTAACGCCATTCCCTGAAGCTCGGACTATTGTGGTTGGTAACGCATACTATCAAGCTGTCCGTTTCTTACCG
CCTGACACTCACGTCGTTTGGGGAGTCAACTTTGGCGCCAAGAACATCACTGCAGCTAATCTAGAAGCGAGAGCT
ATTGTTGAAGCCTTCGCTACACCTGATGTGAAAGACCAGGGCATCATTCTTGATGCGGTGGAAATCGGGAATGAA
GCGGACTTATATCGGGATAACGGTCAGAGGCCCAGGAATTATACACCTGCGCAATACGTTGAAGAGTGGACGGAG
TTTGCTACGAATGTGTCTACTGCGATTGGAATTACTGAGGATTCTCATACGAAATTTTGGGGTGCTTCATTTGCG
ACTTCGAGTCATGCAAACACGAATGGATTTTCTCCTCAATCGATCTTCGAGAATGGGTTACTTGATTCGAAAGCT
GGATCTTTTATATCGACGATTACGCAACATCATTATAGTGGAACGTTTTGTTCAGGAGGTGGCAAGCTTCTACAA
GATTTGATGACGAAAGAGACTATCAGGAGTAATCTCACATCGTTTGCATCTGATGCGAAGGCTGTGCGGGATCAA
GGATTAGATTTTGTTATGGGTGAAACCAACAGCTATTCGTGTCACGGTGCGCCAGGTGTGAGCAATTCAGCTGGA
GCTGCTTTATGGACGTTGGATTATGCGTTATTCTCGACGCAAATTCAATCGTCGAGAATATATTTCCATGAAGGC
ATCGGATTCAAATACAACTTTTTCCAACCAATAGCATTAAACCGATCGATCCTCGACGCCTCACCTCTCCCAGAA
CCCATACCACCACACGTCCAACCCCAATACTACTCCGCCATAATCGCTTTAGAAGCTATCGGTTCGCATCCTCAA
CCTCGTATTGCCGAACTTCAGATCGAGGAATCGACTGTGTCGGGATATGCTTTTTATGAAGATTCGCAGTTGGTC
AGGGCGGTGTTTATCAATTTGAAGGCGTTTTTGGAGGGGCAGGAGGAGGAGAGGAGCAAGGTGCATTTGAAGTTT
GATTTTGTGGGGGGTGAGGTTGGGGAGGAAGTTACTTTGAAGAGACTTGATATTGCGCATGCTGATGATACGGAT
GGTTTGACTTGGGGTGGACAAAGTTATGAAACTAGTGATGGTCGTGTGAGTGGAACGTTGAAAACGGAGAAAGTG
AAGTTGAATGCAGGGTTTGATATCCGAGATACTGAAGTTGTACTGGTGACTTTTTCTTAA
Transcript >AgabiH97|086580
ATGCCACCTTTCCACTGGCCATTTCAGTTTCCTTTTTCCTCTCCTGTAGGTCTAGAAGATGCAGCGGATAAGTTA
ACTTCTTCCTTCGTGATCGACTTTTTCATACAAGCTCTTCCTTGGCGATATTGGGGTTGGATCTGTAGATGTATC
CTCCATTTCGTAGTCACTTTGTTTGCTGTTCAGTCGTCAACAACAATCAACATTTCGATTCCTGCACCGAATGGG
TCGATTCAAATTCCACGGAATTTAATTGGGTTTTCTTTGGAACAAGATCGATGGGTTGATTGGGCTGGTCTTGAT
GAACGGAATCAGTTCTTTTTCAATGTTCTTGATAACATGAAGGCAATATCTGGAGAACCCCCGATAATACGCATT
GGGGCAAATAGTGAAGACCATACGAATTTCAATCCGGATGTCAAGTCACCTCAACTTGTTTTTCCTACACCTAAC
GCTGTAACGCCATTCCCTGAAGCTCGGACTATTGTGGTTGGTAACGCATACTATCAAGCTGTCCGTTTCTTACCG
CCTGACACTCACGTCGTTTGGGGAGTCAACTTTGGCGCCAAGAACATCACTGCAGCTAATCTAGAAGCGAGAGCT
ATTGTTGAAGCCTTCGCTACACCTGATGTGAAAGACCAGGGCATCATTCTTGATGCGGTGGAAATCGGGAATGAA
GCGGACTTATATCGGGATAACGGTCAGAGGCCCAGGAATTATACACCTGCGCAATACGTTGAAGAGTGGACGGAG
TTTGCTACGAATGTGTCTACTGCGATTGGAATTACTGAGGATTCTCATACGAAATTTTGGGGTGCTTCATTTGCG
ACTTCGAGTCATGCAAACACGAATGGATTTTCTCCTCAATCGATCTTCGAGAATGGGTTACTTGATTCGAAAGCT
GGATCTTTTATATCGACGATTACGCAACATCATTATAGTGGAACGTTTTGTTCAGGAGGTGGCAAGCTTCTACAA
GATTTGATGACGAAAGAGACTATCAGGAGTAATCTCACATCGTTTGCATCTGATGCGAAGGCTGTGCGGGATCAA
GGATTAGATTTTGTTATGGGTGAAACCAACAGCTATTCGTGTCACGGTGCGCCAGGTGTGAGCAATTCAGCTGGA
GCTGCTTTATGGACGTTGGATTATGCGTTATTCTCGACGCAAATTCAATCGTCGAGAATATATTTCCATGAAGGC
ATCGGATTCAAATACAACTTTTTCCAACCAATAGCATTAAACCGATCGATCCTCGACGCCTCACCTCTCCCAGAA
CCCATACCACCACACGTCCAACCCCAATACTACTCCGCCATAATCGCTTTAGAAGCTATCGGTTCGCATCCTCAA
CCTCGTATTGCCGAACTTCAGATCGAGGAATCGACTGTGTCGGGATATGCTTTTTATGAAGATTCGCAGTTGGTC
AGGGCGGTGTTTATCAATTTGAAGGCGTTTTTGGAGGGGCAGGAGGAGGAGAGGAGCAAGGTGCATTTGAAGTTT
GATTTTGTGGGGGGTGAGGTTGGGGAGGAAGTTACTTTGAAGAGACTTGATATTGCGCATGCTGATGATACGGAT
GGTTTGACTTGGGGTGGACAAAGTTATGAAACTAGTGATGGTCGTGTGAGTGGAACGTTGAAAACGGAGAAAGTG
AAGTTGAATGCAGGGTTTGATATCCGAGATACTGAAGTTGTACTGGTGACTTTTTCTTAA
Gene >AgabiH97|086580
ATGCCACCTTTCCACTGGCCATTTCAGTTTCCTTTTTCCTCTCCTGTAGGTCTAGAAGATGCAGCGGATAAGTTA
ACTTCTTCCTTCGTGATCGACTTTTTCATACAAGCTCTTCCTTGGCGATATTGGGGTTGGATCTGTAGATGTGGG
TTTCAACTTCCTCACTATAAGTATGTGCGTTGGACTGACTGCTCAATGAAAACTCCACCGCACACACACACCACA
ACCCAATTGACAATGCCGACATTTTCAGGTATCCTCCATTTCGTAGTCACTTTGTTTGCTGTTCAGTCGTCAACA
ACAATCAACATTTCGATTCCTGCACCGAATGGGTCGATTCAAATTCCACGGAATTTAATTGGGTTTTCTTTGGAA
CAAGATCGATGGGTTGATTGGGCTGGTCTTGATGAACGGAATCAGTTCTTTTTCAATGTTCTTGATAACATGAAG
GCAATATCTGGAGAACCCCCGATAATACGCATTGGGGCAAATAGTGAAGACCATACGAATTTCAATCCGGATGTC
AAGGTATATTTCTATGCGCCATACTGAAATTATTGATGTTGATGATATTATAGTCACCTCAACTTGTTTTTCCTA
CACCTAACGCTGTAACGCCATTCCCTGAAGCTCGGACTATTGTGGTTGGTAACGCATACTATCAAGCTGTCCGTT
TCTTACCGCCTGGTACGTCATAATCTTCACCACACTAATTCACATCATGACATGACATGTATCTTAGACACTCAC
GTCGTTTGGGGAGTCAACTTTGGCGCCAAGAACATCACTGCAGCTAATCTAGAAGCGAGAGCTATTGTTGAAGCC
TTCGCTACACCTGATGTGAAAGACCAGGGCATCATTCTTGATGCGGTGGAAATCGGGAATGAAGCGGACTTATAT
CGGGATAACGGTCAGAGGCCCAGGAATTATACACCTGCGCAATACGTTGAAGAGTGAGTCTAACATATGAGATTC
GATGATATTGAATTCATGTTTTTTTTAGGTGGACGGAGTTTGCTACGAATGTGTCTACTGCGATTGGAATTACTG
AGGATTCTCATACGAAATTTTGGGGTGCTTCATTTGCGACTTCGAGTCATGCAAACACGAATGGATTTTCTCCTC
AATCGATCTTCGAGAATGGGTTACTTGATTCGAAAGCTGGATCTTTTATATCGACGTGAGTATCATCCATCACAT
TTTCCGTCTACCCTAACTAAAGAATTTTTGGCATTCATCAATAGGATTACGCAACATCATTATAGTGGAACGTTT
TGTTCAGGAGGTGGCAAGCTTCTACAAGATTTGATGACGAAAGAGACTATCAGGAGTAATCTCACATCGTTTGCA
TCTGATGCGAAGGCTGTGCGGGATCAAGGATTAGATTTTGTTATGGGTGAAACCAACAGCTATTCGTGTCACGTA
AGTGCTTTCTTTTCTGTACAATTTCTTCTTTTCTCATTTTTTTTTCGAGATATAGGGTGCGCCAGGTGTGAGCAA
TTCAGCTGGAGCTGCTTTATGGACGTTGGATTATGCGTTATTCTCGTACGACTCTTTCTTTATCCCTTTATCTCT
TGATTGACGCTGGAATTAAAATAGGACGCAAATTCAATCGTCGAGAATATATTTCCATGAAGGCATCGGATTCAA
ATACAACTTTGTAAGACTTCCATCTAAAACGCAAAAACTCAACTCTTCAAACTGACTTTGGTATTTTTAAAAAGT
TCCAACCAATAGCATTAAACCGATCGATCCTCGACGCCTCACCTCTCCCAGAACCCATACCACCACACGTCCAAC
CCCAATACTACTCCGCCATAATCGCTTTAGAAGCTATCGGTTCGCATCCTCAACCTCGTATTGCCGAACTTCAGA
TCGAGGAATCGACTGTGTCGGGATATGCTTTTTATGAAGATTCGCAGTTGGTCAGGGCGGTGTTTATCAATTTGA
AGGCGTTTTTGGAGGGGCAGGAGGAGGAGAGGAGCAAGGTGCATTTGAAGTTTGATTTTGTGGGGGGTGAGGTTG
GGGAGGAAGTTACTTTGAAGAGACTTGATATTGCGTTCGTCTTTTTCTTTTTTTTTTCTTGGACGGTTTTTTTGA
TGCTGAACTTTTATTTTAGGCATGCTGATGATACGGATGGTTTGACTTGGGGTGGACAAAGTTATGAAACTAGTG
ATGGTCGTGTGAGTGGAACGTTGAAAACGGAGAAAGTGAAGTTGAATGCAGGGTTTGATATCCGAGATACTGAAG
TTGTACTGGTGACTTTTTCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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