© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|086220 |
| Gene name | |
| Location | scaffold_5:1990616..1992454 |
| Strand | - |
| Gene length (bp) | 1838 |
| Transcript length (bp) | 1677 |
| Coding sequence length (bp) | 1677 |
| Protein length (aa) | 559 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01435 | Peptidase_M48 | Peptidase family M48 | 1.5E-16 | 288 | 529 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006508 | proteolysis | Yes |
| GO:0004222 | metalloendopeptidase activity | Yes |
| GO:0008237 | metallopeptidase activity | No |
| GO:0004175 | endopeptidase activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0003824 | catalytic activity | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0019538 | protein metabolic process | No |
| GO:0008233 | peptidase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0008152 | metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 135 | 157 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|086220 MPRPVLKPILPSIFLAQRSLRPKLPLSRSLFFTLAVHKPRTTTPHSLPATYAHFHSTQRIQSPAPLIPIFAVILK TAGALELARTAVRIVLSFVPCIVFKNRWSHKIVLGGKSRHGQPLSAEARERVLKSIRQRGTFLRIILLVPFALFW GTIIASLERTPLTGRWRMIILSPEEENEIAAQLAGPGWYRAVGAILADEGVTSYVPPSDWRYIWVSQTLRKLENT VPVLASEAVHVPDWFEDNADRDGKPMPPPAEFPLLPRSRAAEYLKTWCEEITEQKSVPPVPHSIPGPPYSLVVVE NPDVKNAFSYGFGGDGGGGVVVYSGFLDDILKKYPQQTQTPTQPTSWWSRLVGGLFSSNHTPPHPTPTPEQTTEL AVLLAHELSHLILAHHLETYSSGTVIVPGILSILSDIVRVAVFPLTMLLGPFVNDAVAQIGKVGSGELSKMGEYC MSMKQEVEADVVSARLLAYAGFDAREAINFWESLKGEPNCSGLRKGKSDDPLYKFATLAHSITGETHPEIEVRID NLKKELRRWEEAKLVARTNLLTLPETKSPSNGK* |
| Coding | >AgabiH97|086220 ATGCCCCGGCCGGTCCTCAAGCCCATCCTCCCCAGCATTTTTCTGGCACAACGCTCGCTACGTCCTAAGCTTCCA CTGTCTCGTAGTCTTTTCTTCACCCTCGCGGTCCACAAGCCAAGAACAACGACCCCCCACTCCCTACCAGCCACG TACGCACATTTTCACTCGACGCAGCGCATTCAAAGCCCGGCGCCATTGATCCCTATCTTTGCTGTCATTCTGAAG ACAGCTGGGGCACTAGAGTTGGCTCGGACCGCCGTCCGCATTGTACTCAGCTTTGTCCCTTGCATAGTGTTTAAG AATCGATGGTCCCATAAGATCGTCCTTGGCGGAAAGTCCCGCCATGGCCAACCACTGTCGGCTGAGGCTCGGGAA CGTGTTCTCAAAAGTATAAGACAGAGAGGGACATTCCTCAGGATCATTCTCCTCGTGCCTTTCGCTCTCTTTTGG GGGACGATCATTGCTAGTCTGGAGCGGACACCATTGACCGGAAGATGGCGGATGATCATCCTTTCGCCAGAAGAA GAGAATGAAATTGCTGCGCAACTCGCCGGGCCTGGTTGGTATCGTGCTGTTGGAGCTATTTTGGCGGACGAAGGC GTCACGTCGTATGTCCCACCTTCAGATTGGCGCTATATTTGGGTCAGCCAGACGCTCCGCAAGTTGGAAAATACA GTCCCTGTCTTAGCATCCGAAGCGGTGCATGTTCCCGATTGGTTCGAGGACAATGCTGATAGGGATGGGAAACCT ATGCCTCCACCTGCCGAATTCCCTCTACTACCCAGATCACGAGCGGCAGAGTATCTCAAGACATGGTGCGAGGAG ATAACTGAGCAAAAGTCTGTTCCTCCTGTTCCTCATTCTATACCTGGACCTCCATATTCGCTTGTCGTGGTGGAG AATCCCGACGTCAAGAATGCTTTCTCTTACGGGTTCGGAGGTGATGGTGGAGGCGGAGTCGTTGTGTATTCGGGA TTTCTAGATGACATCTTGAAAAAATACCCTCAGCAAACACAAACACCAACCCAACCAACCTCTTGGTGGTCGCGT CTCGTAGGCGGTCTCTTCTCATCAAATCATACACCTCCCCATCCGACGCCGACGCCCGAACAAACTACCGAACTT GCCGTACTCCTTGCCCATGAACTCTCACATCTTATTCTTGCTCACCATCTTGAAACCTATTCCTCTGGTACCGTC ATCGTCCCAGGAATACTATCTATTCTTTCAGACATTGTGCGAGTAGCAGTGTTTCCTCTCACTATGTTATTGGGA CCATTTGTCAATGATGCTGTTGCGCAAATAGGGAAAGTGGGTTCTGGGGAGTTGAGTAAGATGGGGGAATACTGT ATGAGTATGAAACAGGAAGTTGAAGCAGACGTAGTCTCGGCCAGACTTTTGGCCTACGCTGGCTTTGATGCTAGG GAAGCAATCAATTTTTGGGAAAGTCTTAAGGGGGAGCCAAATTGTTCGGGTTTACGCAAAGGAAAGTCTGATGAT CCACTATACAAATTTGCTACCCTTGCACATAGCATCACTGGAGAGACACATCCTGAGATTGAGGTGCGCATTGAT AACCTGAAGAAGGAGCTACGGAGATGGGAGGAAGCGAAACTTGTGGCGAGGACAAACCTTCTAACGTTACCAGAG ACGAAGTCTCCTTCAAATGGAAAATAA |
| Transcript | >AgabiH97|086220 ATGCCCCGGCCGGTCCTCAAGCCCATCCTCCCCAGCATTTTTCTGGCACAACGCTCGCTACGTCCTAAGCTTCCA CTGTCTCGTAGTCTTTTCTTCACCCTCGCGGTCCACAAGCCAAGAACAACGACCCCCCACTCCCTACCAGCCACG TACGCACATTTTCACTCGACGCAGCGCATTCAAAGCCCGGCGCCATTGATCCCTATCTTTGCTGTCATTCTGAAG ACAGCTGGGGCACTAGAGTTGGCTCGGACCGCCGTCCGCATTGTACTCAGCTTTGTCCCTTGCATAGTGTTTAAG AATCGATGGTCCCATAAGATCGTCCTTGGCGGAAAGTCCCGCCATGGCCAACCACTGTCGGCTGAGGCTCGGGAA CGTGTTCTCAAAAGTATAAGACAGAGAGGGACATTCCTCAGGATCATTCTCCTCGTGCCTTTCGCTCTCTTTTGG GGGACGATCATTGCTAGTCTGGAGCGGACACCATTGACCGGAAGATGGCGGATGATCATCCTTTCGCCAGAAGAA GAGAATGAAATTGCTGCGCAACTCGCCGGGCCTGGTTGGTATCGTGCTGTTGGAGCTATTTTGGCGGACGAAGGC GTCACGTCGTATGTCCCACCTTCAGATTGGCGCTATATTTGGGTCAGCCAGACGCTCCGCAAGTTGGAAAATACA GTCCCTGTCTTAGCATCCGAAGCGGTGCATGTTCCCGATTGGTTCGAGGACAATGCTGATAGGGATGGGAAACCT ATGCCTCCACCTGCCGAATTCCCTCTACTACCCAGATCACGAGCGGCAGAGTATCTCAAGACATGGTGCGAGGAG ATAACTGAGCAAAAGTCTGTTCCTCCTGTTCCTCATTCTATACCTGGACCTCCATATTCGCTTGTCGTGGTGGAG AATCCCGACGTCAAGAATGCTTTCTCTTACGGGTTCGGAGGTGATGGTGGAGGCGGAGTCGTTGTGTATTCGGGA TTTCTAGATGACATCTTGAAAAAATACCCTCAGCAAACACAAACACCAACCCAACCAACCTCTTGGTGGTCGCGT CTCGTAGGCGGTCTCTTCTCATCAAATCATACACCTCCCCATCCGACGCCGACGCCCGAACAAACTACCGAACTT GCCGTACTCCTTGCCCATGAACTCTCACATCTTATTCTTGCTCACCATCTTGAAACCTATTCCTCTGGTACCGTC ATCGTCCCAGGAATACTATCTATTCTTTCAGACATTGTGCGAGTAGCAGTGTTTCCTCTCACTATGTTATTGGGA CCATTTGTCAATGATGCTGTTGCGCAAATAGGGAAAGTGGGTTCTGGGGAGTTGAGTAAGATGGGGGAATACTGT ATGAGTATGAAACAGGAAGTTGAAGCAGACGTAGTCTCGGCCAGACTTTTGGCCTACGCTGGCTTTGATGCTAGG GAAGCAATCAATTTTTGGGAAAGTCTTAAGGGGGAGCCAAATTGTTCGGGTTTACGCAAAGGAAAGTCTGATGAT CCACTATACAAATTTGCTACCCTTGCACATAGCATCACTGGAGAGACACATCCTGAGATTGAGGTGCGCATTGAT AACCTGAAGAAGGAGCTACGGAGATGGGAGGAAGCGAAACTTGTGGCGAGGACAAACCTTCTAACGTTACCAGAG ACGAAGTCTCCTTCAAATGGAAAATAA |
| Gene | >AgabiH97|086220 ATGCCCCGGCCGGTCCTCAAGCCCATCCTCCCCAGCATTTTTCTGGCACAACGCTCGCTACGTCCTAAGCTTCCA CTGTCTCGTAGTCTTTTCTTCACCCTCGCGGTCCACAAGCCAAGAACAACGACCCCCCACTCCCTACCAGCCACG TACGCACATTTTCACTCGACGCAGCGCATTCAAAGCCCGGCGCCATTGATCCCTATCTTTGCTGTCATTCTGAAG GCAAGCACTAGCCTCAATTTTCTCTTCAGATATTAACCACATCCTTTCAGACAGCTGGGGCACTAGAGTTGGCTC GGACCGCCGTCCGCATTGTACTCAGCTTTGTCCCTTGCATAGTGTTTAAGAATCGATGGTCCCATAAGATCGTCC TTGGCGGAAAGTCCCGCCATGGCCAACCACTGTCGGCTGAGGCTCGGGAACGTGTTCTCAAAAGTATAAGACAGA GAGGGACATTCCTCAGGATCATTCTCCTCGTGCCTTTCGCTCTCTTTTGGGGGACGATCATTGCTAGTCTGGAGC GGACACCATTGACCGGAAGGTCAGTTCATCTTCCCCAACAATTCGATTTCGTTGATATACATCTCATTCATTCTA GATGGCGGATGATCATCCTTTCGCCAGAAGAAGAGAATGAAATTGCTGCGCAACTCGCCGGGCCTGGTTGGTATC GTGCTGTTGGAGCTATTTTGGCGGACGAAGGCGTCACGTCGTATGTCCCACCTTCAGATTGGCGCTATATTTGGG TCAGCCAGACGCTCCGCAAGTTGGAAAATACAGTCCCTGTCTTAGCATCCGAAGCGGTGCATGTTCCCGATTGGT TCGAGGACAATGCTGATAGGGATGGGAAACCTATGCCTCCACCTGCCGAATTCCCTCTACTACCCAGATCACGAG CGGCAGAGTATCTCAAGACATGGTGCGAGGAGATAACTGAGCAAAAGTCTGTTCCTCCTGTTCCTCATTCTATAC CTGGACCTCCATATTCGCTTGTCGTGGTGGAGAATCCCGACGTCAAGAATGCTTTCTCTTACGGGTTCGGAGGTG ATGGTGGAGGCGGAGTCGTTGTGTATTCGGGATTTCTAGATGACATCTTGAAAAAATACCCTCAGCAAACACAAA CACCAACCCAACCAACCTCTTGGTGGTCGCGTCTCGTAGGCGGTCTCTTCTCATCAAATCATACACCTCCCCATC CGACGCCGACGCCCGAACAAACTACCGAACTTGCCGTACTCCTTGCCCATGAACTCTCACATCTTATTCTTGCTC ACCATCTTGAAACCTATTCCTCTGGTACCGTCATCGTCCCAGGAATACTATCTATTCTTTCAGACATTGTGCGAG TAGCAGTGTTTCCTCTCACTATGTTATTGGGACCATTTGTCAATGATGCTGTTGCGCAAATAGGGAAAGTGGGTT CTGGGGAGTTGAGTAAGATGGGGGAATACTGTATGAGTATGAAACAGGAAGTTGAAGCAGACGTAGTCTCGGCCA GGTATGTCGTCTGTCCTCTATATGTTCGTAAAGTTATTGATGGTTGTATGAGTAGACTTTTGGCCTACGCTGGCT TTGATGCTAGGGAAGCAATCAATTTTTGGGAAAGTCTTAAGGGGGAGCCAAATTGTTCGGGTTTACGCAAAGGAA AGTCTGATGATCCACTATACAAATTTGCTACCCTTGCACATAGCATCACTGGAGAGACACATCCTGAGATTGAGG TGCGCATTGATAACCTGAAGAAGGAGCTACGGAGATGGGAGGAAGCGAAACTTGTGGCGAGGACAAACCTTCTAA CGTTACCAGAGACGAAGTCTCCTTCAAATGGAAAATAA |