Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|086060
Gene name
Locationscaffold_5:1948463..1950373
Strand-
Gene length (bp)1910
Transcript length (bp)945
Coding sequence length (bp)945
Protein length (aa) 315

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00561 Abhydrolase_1 alpha/beta hydrolase fold 8.8E-37 33 294
PF12697 Abhydrolase_6 Alpha/beta hydrolase family 1.4E-10 35 303
PF12146 Hydrolase_4 Serine aminopeptidase, S33 4.3E-09 56 293

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P93732|PIP_ARATH Proline iminopeptidase OS=Arabidopsis thaliana GN=PIP PE=2 SV=3 2 314 4.0E-129
sp|O83041|PIP_LEPBY Probable proline iminopeptidase OS=Leptolyngbya boryana GN=pip PE=3 SV=1 2 312 7.0E-124
sp|Q9PD69|PIP_XYLFA Proline iminopeptidase OS=Xylella fastidiosa (strain 9a5c) GN=pip PE=3 SV=1 2 311 4.0E-119
sp|Q87DF8|PIP_XYLFT Proline iminopeptidase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=pip PE=3 SV=1 2 311 2.0E-117
sp|P52279|PIP_XANCI Proline iminopeptidase OS=Xanthomonas citri GN=pip PE=1 SV=2 2 312 1.0E-112
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Swissprot ID Swissprot Description Start End E-value
sp|P93732|PIP_ARATH Proline iminopeptidase OS=Arabidopsis thaliana GN=PIP PE=2 SV=3 2 314 4.0E-129
sp|O83041|PIP_LEPBY Probable proline iminopeptidase OS=Leptolyngbya boryana GN=pip PE=3 SV=1 2 312 7.0E-124
sp|Q9PD69|PIP_XYLFA Proline iminopeptidase OS=Xylella fastidiosa (strain 9a5c) GN=pip PE=3 SV=1 2 311 4.0E-119
sp|Q87DF8|PIP_XYLFT Proline iminopeptidase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=pip PE=3 SV=1 2 311 2.0E-117
sp|P52279|PIP_XANCI Proline iminopeptidase OS=Xanthomonas citri GN=pip PE=1 SV=2 2 312 1.0E-112
sp|O32449|PIP_SERMA Proline iminopeptidase OS=Serratia marcescens GN=pip PE=1 SV=1 2 312 5.0E-108
sp|Q9JZR6|PIP_NEIMB Proline iminopeptidase OS=Neisseria meningitidis serogroup B (strain MC58) GN=pip PE=3 SV=1 2 309 3.0E-103
sp|Q9JUV1|PIP_NEIMA Proline iminopeptidase OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=pip PE=3 SV=1 2 309 8.0E-103
sp|P42786|PIP_NEIGO Proline iminopeptidase OS=Neisseria gonorrhoeae GN=pip PE=1 SV=1 2 309 9.0E-102
sp|Q9S2L4|PIP_STRCO Probable proline iminopeptidase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=SCO1989 PE=3 SV=1 2 312 3.0E-71
sp|P47266|PIP_MYCGE Putative proline iminopeptidase OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) GN=pip PE=3 SV=1 12 301 6.0E-60
sp|P75092|PIP_MYCPN Putative proline iminopeptidase OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129) GN=pip PE=3 SV=1 8 301 2.0E-58
sp|C0ZKI1|PIP_BREBN Proline iminopeptidase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pip PE=3 SV=1 22 293 7.0E-16
sp|P46541|PIP_BACCO Proline iminopeptidase OS=Bacillus coagulans GN=pip PE=1 SV=2 9 293 5.0E-14
sp|B0SW62|RUTD_CAUSK Putative aminoacrylate hydrolase RutD OS=Caulobacter sp. (strain K31) GN=rutD PE=3 SV=1 14 130 3.0E-11
sp|P52278|PIP_LACHE Proline iminopeptidase OS=Lactobacillus helveticus GN=pip PE=1 SV=1 23 126 8.0E-11
sp|A8YWL3|PIP_LACH4 Proline iminopeptidase OS=Lactobacillus helveticus (strain DPC 4571) GN=pip PE=3 SV=1 23 126 8.0E-11
sp|D5H0J3|PIP_LACCS Proline iminopeptidase OS=Lactobacillus crispatus (strain ST1) GN=pip PE=3 SV=1 23 122 9.0E-11
sp|P46544|PIP_LACDE Proline iminopeptidase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=pepIP PE=1 SV=2 34 293 5.0E-10
sp|Q1G8L9|PIP_LACDA Proline iminopeptidase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081 / JCM 1002 / NBRC 13953 / NCIMB 11778) GN=pepIP PE=3 SV=1 34 293 5.0E-10
sp|Q5FMT1|PIP_LACAC Proline iminopeptidase OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM) GN=pip PE=3 SV=1 23 126 1.0E-09
sp|P23106|XYLF_PSEPU 2-hydroxymuconate semialdehyde hydrolase OS=Pseudomonas putida GN=xylF PE=1 SV=1 31 314 2.0E-09
sp|A5I3F5|PIP_CLOBH Proline iminopeptidase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=pip PE=3 SV=1 20 130 2.0E-09
sp|P46542|PIP_LACDL Proline iminopeptidase OS=Lactobacillus delbrueckii subsp. lactis GN=pip PE=1 SV=1 34 138 5.0E-09
sp|Q184M8|PIP_PEPD6 Proline iminopeptidase OS=Peptoclostridium difficile (strain 630) GN=pip PE=3 SV=1 23 138 1.0E-08
sp|P23133|TODF_PSEP1 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=todF PE=3 SV=2 32 293 1.0E-07
sp|A8IAD8|RUTD_AZOC5 Putative aminoacrylate hydrolase RutD OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) GN=rutD PE=3 SV=1 22 130 1.0E-07
sp|C7PDD8|PIP_CHIPD Proline iminopeptidase OS=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) GN=Cpin_0261 PE=3 SV=2 28 138 1.0E-06
sp|D5VGV3|RUTD_CAUST Putative aminoacrylate hydrolase RutD OS=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) GN=rutD PE=3 SV=1 14 130 1.0E-06
sp|Q03NE0|PIP_LACBA Proline iminopeptidase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=pip PE=3 SV=1 3 130 1.0E-06
sp|P96084|PIP_THEAC Proline iminopeptidase OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=pip PE=1 SV=1 15 293 3.0E-06
sp|A1JMX1|RUTD_YERE8 Putative aminoacrylate hydrolase RutD OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) GN=rutD PE=3 SV=1 22 129 4.0E-06
sp|P07383|TPES_PSEPU Tropinesterase OS=Pseudomonas putida PE=1 SV=1 13 130 6.0E-06
sp|Q400K3|MHPC2_PSEPU 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase 2 OS=Pseudomonas putida GN=mhpC2 PE=3 SV=1 18 135 1.0E-05
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 59 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|086060
MLYQPIEPYETGTLKVSDIHTLYYEISGNKEGNPVVFLHGGPGGGTNPGDRTFFNPDKYKIILFDQRGAGKSTPR
GCVEENTTWDLVDDIERLREKLGVEKWHVFGGSWGSTLSLAYAQSHPNRVKSLVIRGVCTVRKSEMQFPLQSGTC
HFFPEAWDEFVAPIPESERDDLISAYHKRLNSDDEATRKAAAKSWVRWEMSISKLYIDPNLIAQADDDFFADAFA
RIEAHYFINDGFMRDGQLLEKDSVDKIRHIPTIMIQGRYDVACPPATAYALKKVFPEAMLHIVPDAGHSSREPGT
LKLLVEATDKFADL*
Coding >AgabiH97|086060
ATGTTGTACCAGCCTATCGAACCCTATGAAACGGGGACCCTCAAGGTCTCCGACATCCACACCCTCTATTACGAA
ATTTCTGGTAATAAGGAAGGGAATCCAGTGGTCTTCCTCCACGGTGGCCCTGGAGGAGGGACCAACCCGGGTGAT
CGTACTTTCTTCAACCCTGACAAATACAAGATTATCCTGTTTGACCAACGGGGCGCCGGAAAATCTACCCCAAGA
GGATGTGTGGAAGAAAATACTACATGGGATCTTGTGGACGATATTGAAAGGTTGAGAGAGAAGTTGGGTGTTGAG
AAGTGGCATGTTTTTGGTGGATCTTGGGGATCCACGCTTTCATTGGCGTATGCCCAGTCTCACCCTAACCGAGTC
AAGTCTCTGGTCATACGTGGCGTTTGTACTGTACGCAAGAGTGAAATGCAGTTTCCGCTTCAAAGTGGGACCTGT
CACTTCTTCCCAGAAGCATGGGATGAGTTTGTAGCGCCCATTCCAGAGTCCGAGCGAGATGATCTTATCTCTGCC
TACCACAAGCGACTTAACTCGGATGATGAGGCCACCCGTAAGGCTGCGGCTAAATCATGGGTGAGATGGGAGATG
TCGATTTCGAAGCTATATATTGATCCGAATTTGATCGCGCAAGCCGATGATGATTTTTTCGCCGACGCTTTCGCT
CGAATTGAAGCCCACTATTTTATAAACGATGGCTTCATGAGGGATGGGCAACTGCTTGAGAAGGATTCTGTTGAT
AAGATCCGCCATATCCCTACTATTATGATTCAGGGGCGGTACGACGTTGCCTGTCCTCCCGCAACCGCGTATGCA
TTAAAAAAGGTATTCCCTGAAGCGATGTTGCATATTGTTCCCGATGCTGGTCACTCTTCACGCGAGCCTGGTACT
TTAAAGCTTCTTGTGGAGGCTACAGACAAGTTTGCAGATCTTTAA
Transcript >AgabiH97|086060
ATGTTGTACCAGCCTATCGAACCCTATGAAACGGGGACCCTCAAGGTCTCCGACATCCACACCCTCTATTACGAA
ATTTCTGGTAATAAGGAAGGGAATCCAGTGGTCTTCCTCCACGGTGGCCCTGGAGGAGGGACCAACCCGGGTGAT
CGTACTTTCTTCAACCCTGACAAATACAAGATTATCCTGTTTGACCAACGGGGCGCCGGAAAATCTACCCCAAGA
GGATGTGTGGAAGAAAATACTACATGGGATCTTGTGGACGATATTGAAAGGTTGAGAGAGAAGTTGGGTGTTGAG
AAGTGGCATGTTTTTGGTGGATCTTGGGGATCCACGCTTTCATTGGCGTATGCCCAGTCTCACCCTAACCGAGTC
AAGTCTCTGGTCATACGTGGCGTTTGTACTGTACGCAAGAGTGAAATGCAGTTTCCGCTTCAAAGTGGGACCTGT
CACTTCTTCCCAGAAGCATGGGATGAGTTTGTAGCGCCCATTCCAGAGTCCGAGCGAGATGATCTTATCTCTGCC
TACCACAAGCGACTTAACTCGGATGATGAGGCCACCCGTAAGGCTGCGGCTAAATCATGGGTGAGATGGGAGATG
TCGATTTCGAAGCTATATATTGATCCGAATTTGATCGCGCAAGCCGATGATGATTTTTTCGCCGACGCTTTCGCT
CGAATTGAAGCCCACTATTTTATAAACGATGGCTTCATGAGGGATGGGCAACTGCTTGAGAAGGATTCTGTTGAT
AAGATCCGCCATATCCCTACTATTATGATTCAGGGGCGGTACGACGTTGCCTGTCCTCCCGCAACCGCGTATGCA
TTAAAAAAGGTATTCCCTGAAGCGATGTTGCATATTGTTCCCGATGCTGGTCACTCTTCACGCGAGCCTGGTACT
TTAAAGCTTCTTGTGGAGGCTACAGACAAGTTTGCAGATCTTTAA
Gene >AgabiH97|086060
ATGTTGTACCAGCCTATCGAACCCTATGAAACGGGGACCCTCAAGGTCTCCGACATCCACACCCTCTAGTAAGTC
GCTTTCTCTTTCTACCAAGTACCAAGCCGATCTAACAATACTATCCCTTAAGTTACGAAATTTCTGGTAATAAGG
AAGGGAATCCAGGTGAGTACATAGCTTGTGTAAGTTGAATCGTGTCTGATGCGTATCTTCAGTGGTCTTCCTCCA
CGGTCCGTCCATCGTTCACCTCCATTTTCTAATGCATCGCTACACATAAAATCAGGTGGCCCTGGAGGAGGGACC
AACCCGGGTGATCGTACTTTCTTCAACCCTGACAAATACAAGGTTGCTTAACCGGCACTGGCTGTTTACTATCTC
CCCAAACACTAACTCACTCATGTAGATTATCCTGTTTGACCAACGGGGCGCCGGAAAATCTACCCCGTAAGCTTT
CTCCACCGAACGTGATTTGAAATCATATGGCTGACGGGATCTTGTAGAAGAGGATGTGTGGAAGAAAATACTACA
TGGGATCTTGTGGACGATATTGAAAGGTTGAGAGAGAAGTTGGGTGTTGAGAAGTGGCATGTTTTTGGTGGATCT
TGGGTAAAGCGTGTCTCTCCTGTAGTCACATTGGACTTTGTTCATTGATTCTTGGGTAGGGATCCACGCTTTCAT
TGGCGTATGCCCAGGTGAGTGCCGTTGAAATAGGGTCGTTGAACCATTCACCCTGATGTTCATCCAAGTCTCACC
CTAACCGAGTCAAGTCTCTGGTCATACGGTGAGAAAATATTTTCTCCTGGATAGTTTTCCGAGATTGATTGCCTC
CCAGTGGCGTTTGTACTGTACGCAAGAGGTGGGTCGTCATGTATAATTTCGATTGGTAACATTTATATTCATGTT
ATCTTAGTGAAATGCAGTTTCCGCTTCAAAGTGGGACCTGTCACTTCTTCCCAGAAGCATGGTGAGTCAGACATT
CTATATCTTCATTATCACCTTCTTGAACCCTTCTTTGATCCTTACTCAGGGATGAGTTTGTAGCGCCCATTCCAG
AGTCCGAGCGAGATGATCTTATCTCTGCCTACCACAAGCGACTTAACTCGGATGATGAGGCCACCCGTAAGGCTG
CGGCTAAATCATGGGTGAGATGGGAGTGAGTATCTCTTGTCTTACTACAGGATTTTTTTGTTCTCACTCGAGTGT
CTTCCAGGATGTCGATTTCGAAGCTATATATTGATCCGAATTTGATCGCGCAAGCCGATGATGATTTTTTCGCCG
AGTATGTTAGACAATTCTTGTGCGATCGCTCATATTAACCGGTCATATATATATATATTTTCAGCGCTTTCGCTC
GAATTGAAGCCCACTATTTTATAAACGATGTTCGTACAAGTCCCCAATAATGAATTTTCAAGTGTAACGTCTCCG
TCACTTAGGGCTTCATGAGGGATGGGCAACTGCTTGAGAAGGATTCTGTTGATAAGATGTGAGCACCTTCCTTCT
CTCCTAACCTATCTCTTGTTTAAAGTCTATCAATTTTAGCCGCCATATCCCTACTATTATGATTCAGGGGCGGTA
CGACGTTGCCTGTCCTGTAAGATTTTCGTTCATTATGTTCGATAGTCGATCTCTAATCTCTATCATACTATAGCC
CGCAACCGCGTATGCATTAAAAAAGGTCTGGCTAAAGGAATTTTGGTTGTGTTAAAATCTTACTAAATTACCAAT
TTTTTGTCTACCTAGGTATTCCCTGAAGCGATGTTGCATATTGTTCCCGATGCTGGTCACTCTTCACGCGAGCCT
GGTACTTTAAAGCTTCTTGTGGAGGTAAGATTTCGATATTTTCAGTATTTCTAATTTCAAGAATTAATCACCTTT
TGGTGCAGGCTACAGACAAGTTTGCAGATCTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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