Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|085860
Gene name
Locationscaffold_5:1906818..1908026
Strand+
Gene length (bp)1208
Transcript length (bp)891
Coding sequence length (bp)891
Protein length (aa) 297

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00378 ECH_1 Enoyl-CoA hydratase/isomerase 5.8E-36 16 270
PF16113 ECH_2 Enoyl-CoA hydratase/isomerase 1.6E-14 19 260

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|A4YI89|HPCD_METS5 3-hydroxypropionyl-coenzyme A dehydratase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=Msed_2001 PE=1 SV=1 5 271 4.0E-25
sp|Q1ZXF1|ECHM_DICDI Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=echs1 PE=3 SV=1 3 269 5.0E-24
sp|P9WNP1|ECHA6_MYCTU Probable enoyl-CoA hydratase echA6 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=echA6 PE=1 SV=1 9 271 2.0E-20
sp|P9WNP0|ECHA6_MYCTO Probable enoyl-CoA hydratase echA6 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=echA6 PE=3 SV=1 9 271 2.0E-20
sp|P64015|ECHA6_MYCBO Probable enoyl-CoA hydratase echA6 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=echA6 PE=3 SV=1 9 271 2.0E-20
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|A4YI89|HPCD_METS5 3-hydroxypropionyl-coenzyme A dehydratase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=Msed_2001 PE=1 SV=1 5 271 4.0E-25
sp|Q1ZXF1|ECHM_DICDI Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=echs1 PE=3 SV=1 3 269 5.0E-24
sp|P9WNP1|ECHA6_MYCTU Probable enoyl-CoA hydratase echA6 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=echA6 PE=1 SV=1 9 271 2.0E-20
sp|P9WNP0|ECHA6_MYCTO Probable enoyl-CoA hydratase echA6 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=echA6 PE=3 SV=1 9 271 2.0E-20
sp|P64015|ECHA6_MYCBO Probable enoyl-CoA hydratase echA6 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=echA6 PE=3 SV=1 9 271 2.0E-20
sp|A8ALR7|CAID_CITK8 Carnitinyl-CoA dehydratase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=caiD PE=3 SV=1 13 271 5.0E-20
sp|P9WNN9|ECHA8_MYCTU Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=echA8 PE=1 SV=1 6 270 7.0E-20
sp|P9WNN8|ECHA8_MYCTO Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=echA8 PE=3 SV=1 6 270 7.0E-20
sp|P64017|ECHA8_MYCBO Probable enoyl-CoA hydratase echA8 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=echA8 PE=3 SV=1 6 270 7.0E-20
sp|P76082|PAAF_ECOLI 2,3-dehydroadipyl-CoA hydratase OS=Escherichia coli (strain K12) GN=paaF PE=1 SV=1 6 271 9.0E-20
sp|Q86YB7|ECHD2_HUMAN Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Homo sapiens GN=ECHDC2 PE=1 SV=2 14 271 1.0E-19
sp|Q8BH95|ECHM_MOUSE Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1 SV=1 13 269 2.0E-19
sp|Q8GB17|CAID_PROSL Carnitinyl-CoA dehydratase OS=Proteus sp. (strain LE138) GN=caiD PE=1 SV=3 15 271 7.0E-19
sp|B4EY26|CAID_PROMH Carnitinyl-CoA dehydratase OS=Proteus mirabilis (strain HI4320) GN=caiD PE=3 SV=1 15 271 7.0E-19
sp|Q8Z9L5|CAID_SALTI Carnitinyl-CoA dehydratase OS=Salmonella typhi GN=caiD PE=3 SV=3 7 271 7.0E-19
sp|B4T6J5|CAID_SALNS Carnitinyl-CoA dehydratase OS=Salmonella newport (strain SL254) GN=caiD PE=3 SV=1 7 271 7.0E-19
sp|B5RGA4|CAID_SALG2 Carnitinyl-CoA dehydratase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=caiD PE=3 SV=1 7 271 8.0E-19
sp|B5R1Q9|CAID_SALEP Carnitinyl-CoA dehydratase OS=Salmonella enteritidis PT4 (strain P125109) GN=caiD PE=3 SV=1 7 271 8.0E-19
sp|Q8ZRX5|CAID_SALTY Carnitinyl-CoA dehydratase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=caiD PE=3 SV=3 7 271 1.0E-18
sp|B4TWR3|CAID_SALSV Carnitinyl-CoA dehydratase OS=Salmonella schwarzengrund (strain CVM19633) GN=caiD PE=3 SV=1 7 271 1.0E-18
sp|B4TIG9|CAID_SALHS Carnitinyl-CoA dehydratase OS=Salmonella heidelberg (strain SL476) GN=caiD PE=3 SV=1 7 271 1.0E-18
sp|B5BL54|CAID_SALPK Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A (strain AKU_12601) GN=caiD PE=3 SV=1 7 271 1.0E-18
sp|C0Q4L2|CAID_SALPC Carnitinyl-CoA dehydratase OS=Salmonella paratyphi C (strain RKS4594) GN=caiD PE=3 SV=1 7 271 1.0E-18
sp|Q5PIL1|CAID_SALPA Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=caiD PE=3 SV=1 7 271 1.0E-18
sp|Q57TJ1|CAID_SALCH Carnitinyl-CoA dehydratase OS=Salmonella choleraesuis (strain SC-B67) GN=caiD PE=3 SV=1 7 271 1.0E-18
sp|B5F749|CAID_SALA4 Carnitinyl-CoA dehydratase OS=Salmonella agona (strain SL483) GN=caiD PE=3 SV=1 7 271 1.0E-18
sp|A9MYJ5|CAID_SALPB Carnitinyl-CoA dehydratase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=caiD PE=3 SV=1 7 271 1.0E-18
sp|B5FHG4|CAID_SALDC Carnitinyl-CoA dehydratase OS=Salmonella dublin (strain CT_02021853) GN=caiD PE=3 SV=1 7 271 1.0E-18
sp|P14604|ECHM_RAT Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1 PE=1 SV=1 13 269 2.0E-18
sp|A9MR28|CAID_SALAR Carnitinyl-CoA dehydratase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=caiD PE=3 SV=1 7 271 3.0E-18
sp|Q8XA35|CAID_ECO57 Carnitinyl-CoA dehydratase OS=Escherichia coli O157:H7 GN=caiD PE=3 SV=3 7 271 5.0E-18
sp|Q58DM8|ECHM_BOVIN Enoyl-CoA hydratase, mitochondrial OS=Bos taurus GN=ECHS1 PE=2 SV=1 13 269 6.0E-18
sp|O34893|YNGF_BACSU Putative enoyl-CoA hydratase/isomerase YngF OS=Bacillus subtilis (strain 168) GN=yngF PE=3 SV=1 20 272 8.0E-18
sp|P59395|CAID_SHIFL Carnitinyl-CoA dehydratase OS=Shigella flexneri GN=caiD PE=3 SV=2 7 271 9.0E-18
sp|P31551|CAID_ECOLI Carnitinyl-CoA dehydratase OS=Escherichia coli (strain K12) GN=caiD PE=1 SV=4 7 271 1.0E-17
sp|B1IRE0|CAID_ECOLC Carnitinyl-CoA dehydratase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=caiD PE=3 SV=1 7 271 1.0E-17
sp|Q8FLA6|CAID_ECOL6 Carnitinyl-CoA dehydratase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=caiD PE=3 SV=3 7 271 1.0E-17
sp|Q0TLV3|CAID_ECOL5 Carnitinyl-CoA dehydratase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=caiD PE=3 SV=1 7 271 1.0E-17
sp|B1LFW9|CAID_ECOSM Carnitinyl-CoA dehydratase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=caiD PE=3 SV=1 7 271 1.0E-17
sp|Q50130|ECHA6_MYCLE Probable enoyl-CoA hydratase echA6 OS=Mycobacterium leprae (strain TN) GN=echA6 PE=3 SV=1 9 271 2.0E-17
sp|P52046|CRT_CLOAB Short-chain-enoyl-CoA hydratase OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=crt PE=1 SV=1 5 265 3.0E-17
sp|P30084|ECHM_HUMAN Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1 SV=4 13 269 3.0E-17
sp|Q5R646|ECHM_PONAB Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2 SV=1 13 269 6.0E-17
sp|P77467|PAAG_ECOLI 1,2-epoxyphenylacetyl-CoA isomerase OS=Escherichia coli (strain K12) GN=paaG PE=1 SV=1 17 271 6.0E-17
sp|P41942|YKB4_CAEEL Uncharacterized protein B0272.4 OS=Caenorhabditis elegans GN=B0272.4 PE=3 SV=1 9 195 8.0E-17
sp|O07137|ECHA8_MYCLE Probable enoyl-CoA hydratase echA8 OS=Mycobacterium leprae (strain TN) GN=echA8 PE=3 SV=1 6 270 1.0E-16
sp|Q3TLP5|ECHD2_MOUSE Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Mus musculus GN=Echdc2 PE=1 SV=2 17 271 7.0E-16
sp|Q2TBT3|ECHD2_BOVIN Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Bos taurus GN=ECHDC2 PE=2 SV=1 17 271 5.0E-15
sp|P34559|ECHM_CAEEL Probable enoyl-CoA hydratase, mitochondrial OS=Caenorhabditis elegans GN=ech-6 PE=3 SV=1 9 269 7.0E-14
sp|Q54SS0|ECH1_DICDI Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Dictyostelium discoideum GN=ech1 PE=3 SV=1 18 269 8.0E-13
sp|Q9LCU3|CBAD2_ARTSP 4-chlorobenzoyl coenzyme A dehalogenase-2 OS=Arthrobacter sp. GN=fcbB2 PE=1 SV=1 1 264 5.0E-12
sp|O85078|CBAD1_ARTSP 4-chlorobenzoyl coenzyme A dehalogenase-1 OS=Arthrobacter sp. GN=fcbB1 PE=1 SV=2 1 264 7.0E-12
sp|Q869N6|CRTL_DICDI 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial OS=Dictyostelium discoideum GN=DDB_G0271866 PE=3 SV=1 20 276 2.0E-11
sp|Q52995|ECHH_RHIME Probable enoyl-CoA hydratase OS=Rhizobium meliloti (strain 1021) GN=fadB1 PE=3 SV=2 6 269 3.0E-11
sp|P94549|FADB_BACSU Probable enoyl-CoA hydratase OS=Bacillus subtilis (strain 168) GN=fadB PE=2 SV=1 9 271 5.0E-11
sp|Q9WUR2|ECI2_MOUSE Enoyl-CoA delta isomerase 2, mitochondrial OS=Mus musculus GN=Eci2 PE=1 SV=2 7 195 9.0E-11
sp|O35459|ECH1_MOUSE Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus musculus GN=Ech1 PE=1 SV=1 2 268 2.0E-10
sp|O75521|ECI2_HUMAN Enoyl-CoA delta isomerase 2, mitochondrial OS=Homo sapiens GN=ECI2 PE=1 SV=4 6 195 2.0E-10
sp|Q62651|ECH1_RAT Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Rattus norvegicus GN=Ech1 PE=1 SV=2 17 268 3.0E-10
sp|Q7U004|ECH12_MYCBO Probable enoyl-CoA hydratase echA12 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=echA12 PE=3 SV=1 17 208 4.0E-10
sp|P45361|CRT_PEPDI Short-chain-enoyl-CoA hydratase (Fragment) OS=Peptoclostridium difficile GN=crt PE=3 SV=1 107 261 8.0E-10
sp|Q8BMS1|ECHA_MOUSE Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus GN=Hadha PE=1 SV=1 15 226 9.0E-10
sp|Q13825|AUHM_HUMAN Methylglutaconyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=AUH PE=1 SV=1 17 271 9.0E-10
sp|Q64428|ECHA_RAT Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus GN=Hadha PE=1 SV=2 15 226 1.0E-09
sp|Q8GYN9|MENB_ARATH 1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal OS=Arabidopsis thaliana GN=MENB PE=1 SV=2 2 270 1.0E-09
sp|Q8DSN0|FABM_STRMU Trans-2-decenoyl-[acyl-carrier-protein] isomerase OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA159) GN=fabM PE=3 SV=1 6 271 1.0E-09
sp|Q9JLZ3|AUHM_MOUSE Methylglutaconyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Auh PE=1 SV=1 17 271 2.0E-09
sp|P53526|ECH12_MYCLE Probable enoyl-CoA hydratase echA12 OS=Mycobacterium leprae (strain TN) GN=echA12 PE=3 SV=1 17 179 2.0E-09
sp|O07533|YHAR_BACSU Putative enoyl-CoA hydratase/isomerase YhaR OS=Bacillus subtilis (strain 168) GN=yhaR PE=3 SV=4 14 269 2.0E-09
sp|P9WNN7|ECH12_MYCTU Probable enoyl-CoA hydratase echA12 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=echA12 PE=1 SV=1 17 208 2.0E-09
sp|P9WNN6|ECH12_MYCTO Probable enoyl-CoA hydratase echA12 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=echA12 PE=3 SV=1 17 208 2.0E-09
sp|Q5XIC0|ECI2_RAT Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus GN=Eci2 PE=1 SV=1 7 195 3.0E-09
sp|Q29554|ECHA_PIG Trifunctional enzyme subunit alpha, mitochondrial OS=Sus scrofa GN=HADHA PE=1 SV=1 15 226 2.0E-08
sp|Q54HG7|AUHM_DICDI Methylglutaconyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=auh PE=3 SV=1 19 271 5.0E-08
sp|A8FP63|FADB_SHESH Fatty acid oxidation complex subunit alpha OS=Shewanella sediminis (strain HAW-EB3) GN=fadB PE=3 SV=1 20 212 6.0E-08
sp|B1KCZ3|FADB_SHEWM Fatty acid oxidation complex subunit alpha OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=fadB PE=3 SV=1 20 183 9.0E-08
sp|Q49WG8|MENB_STAS1 1,4-dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=menB PE=3 SV=1 5 269 1.0E-07
sp|B8CH91|FADB_SHEPW Fatty acid oxidation complex subunit alpha OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=fadB PE=3 SV=1 20 183 2.0E-07
sp|Q9Y232|CDYL1_HUMAN Chromodomain Y-like protein OS=Homo sapiens GN=CDYL PE=1 SV=2 5 194 2.0E-07
sp|Q6AYK9|CDYL_RAT Chromodomain Y-like protein OS=Rattus norvegicus GN=Cdyl PE=1 SV=1 5 194 3.0E-07
sp|A7MQP0|FADB_CROS8 Fatty acid oxidation complex subunit alpha OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=fadB PE=3 SV=1 29 183 4.0E-07
sp|P24162|ECHH_RHOCB Probable enoyl-CoA hydratase OS=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=fadB1 PE=3 SV=1 6 271 5.0E-07
sp|P28817|HIBCH_YEAST 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EHD3 PE=1 SV=2 20 180 6.0E-07
sp|B0TLB9|FADB_SHEHH Fatty acid oxidation complex subunit alpha OS=Shewanella halifaxensis (strain HAW-EB4) GN=fadB PE=3 SV=1 20 183 1.0E-06
sp|Q96DC8|ECHD3_HUMAN Enoyl-CoA hydratase domain-containing protein 3, mitochondrial OS=Homo sapiens GN=ECHDC3 PE=1 SV=2 14 270 1.0E-06
sp|Q8N8U2|CDYL2_HUMAN Chromodomain Y-like protein 2 OS=Homo sapiens GN=CDYL2 PE=1 SV=2 6 237 1.0E-06
sp|Q9D5D8|CDYL2_MOUSE Chromodomain Y-like protein 2 OS=Mus musculus GN=Cdyl2 PE=1 SV=1 6 236 1.0E-06
sp|B5XYH0|FADB_KLEP3 Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae (strain 342) GN=fadB PE=3 SV=1 29 183 2.0E-06
sp|Q8CPQ4|MENB_STAES 1,4-dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=menB PE=3 SV=1 5 269 2.0E-06
sp|Q9TM10|MENB_CYACA 1,4-dihydroxy-2-naphthoyl-CoA synthase OS=Cyanidium caldarium GN=menB PE=3 SV=1 6 270 2.0E-06
sp|Q5HQC3|MENB_STAEQ 1,4-dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=menB PE=3 SV=1 5 269 2.0E-06
sp|A8G8D1|FADB_SERP5 Fatty acid oxidation complex subunit alpha OS=Serratia proteamaculans (strain 568) GN=fadB PE=3 SV=1 14 180 3.0E-06
sp|A6TGM4|FADB_KLEP7 Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fadB PE=3 SV=1 29 183 3.0E-06
sp|A8GYG0|FADB_SHEPA Fatty acid oxidation complex subunit alpha OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=fadB PE=3 SV=1 20 183 3.0E-06
sp|Q3MIE0|ECHD3_RAT Enoyl-CoA hydratase domain-containing protein 3, mitochondrial OS=Rattus norvegicus GN=Echdc3 PE=2 SV=1 12 270 4.0E-06
sp|Q6D2L7|FADJ_PECAS Fatty acid oxidation complex subunit alpha OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=fadJ PE=3 SV=1 25 176 4.0E-06
sp|P9WNP5|MENB_MYCTU 1,4-dihydroxy-2-naphthoyl-CoA synthase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=menB PE=1 SV=1 3 270 5.0E-06
sp|P9WNP4|MENB_MYCTO 1,4-dihydroxy-2-naphthoyl-CoA synthase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=menB PE=3 SV=1 3 270 5.0E-06
sp|Q4L549|MENB_STAHJ 1,4-dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=menB PE=3 SV=1 5 269 5.0E-06
sp|A0KEL1|FADB_AERHH Fatty acid oxidation complex subunit alpha OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240) GN=fadB PE=3 SV=1 29 182 6.0E-06
sp|Q7MZ92|FADB_PHOLL Fatty acid oxidation complex subunit alpha OS=Photorhabdus luminescens subsp. laumondii (strain TT01) GN=fadB PE=3 SV=1 13 214 7.0E-06
sp|Q7A6A9|MENB_STAAN 1,4-dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus (strain N315) GN=menB PE=1 SV=1 5 269 7.0E-06
sp|Q99V48|MENB_STAAM 1,4-dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=menB PE=3 SV=1 5 269 7.0E-06
sp|Q93TU6|CAMK_RHOSO 6-oxocamphor hydrolase OS=Rhodococcus sp. GN=camK PE=1 SV=1 6 179 7.0E-06
sp|A7FDF2|FADB_YERP3 Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadB PE=3 SV=1 29 182 9.0E-06
sp|Q66FR8|FADB_YERPS Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=fadB PE=3 SV=1 29 182 9.0E-06
sp|B2K0Z6|FADB_YERPB Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=fadB PE=3 SV=1 29 182 9.0E-06
sp|B1JP63|FADB_YERPY Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=fadB PE=3 SV=1 29 182 1.0E-05
sp|A4TR27|FADB_YERPP Fatty acid oxidation complex subunit alpha OS=Yersinia pestis (strain Pestoides F) GN=fadB PE=3 SV=1 29 182 1.0E-05
sp|Q1CN99|FADB_YERPN Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadB PE=3 SV=1 29 182 1.0E-05
sp|A9R754|FADB_YERPG Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv. Antiqua (strain Angola) GN=fadB PE=3 SV=1 29 182 1.0E-05
sp|Q8ZAN0|FADB_YERPE Fatty acid oxidation complex subunit alpha OS=Yersinia pestis GN=fadB PE=3 SV=1 29 182 1.0E-05
sp|Q1C2C4|FADB_YERPA Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadB PE=3 SV=1 29 182 1.0E-05
sp|A4WFX4|FADB_ENT38 Fatty acid oxidation complex subunit alpha OS=Enterobacter sp. (strain 638) GN=fadB PE=3 SV=1 29 183 1.0E-05
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GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 63 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Casing Casing mycelium 180.19 107.86 252.52
Initials Initials knots 185.17 111.23 259.11
Pileal_Stipeal_center Stage I stipe center 226.36 133.89 318.83
Pileal_Stipeal_shell Stage I stipe shell 215.55 127.96 303.14
DIF_stipe_center Stage II stipe center 193.82 116.26 271.38
DIF_stipe_shell Stage II stipe shell 234.88 139.19 330.57
DIF_stipe_skin Stage II stipe skin 221.57 131.72 311.42
DIF_cap_skin Stage II cap skin 201.18 119.90 282.46
DIF_cap_tissue Stage II cap tissue 194.42 116.57 272.26
DIF_gill_tissue Stage II gill tissue 192.42 115.20 269.64
YFB_stipe_center Young fruiting body stipe center 209.07 123.97 294.18
YFB_stipe_shell Young fruiting body stipe shell 236.49 140.77 332.20
YFB_stipe_skin Young fruiting body stipe skin 234.33 139.85 328.81
YFB_cap_skin Young fruiting body cap skin 266.64 157.19 376.08
YFB_cap_tissue Young fruiting body cap tissue 199.06 118.98 279.14
YFB_gill_tissue Young fruiting body gill tissue 273.29 158.90 387.68
YFB_veil Young fruiting body veil 230.04 137.27 322.80

Differential expression

Label1 Label2 Q-value Significant difference
Casing DIF_gill_tissue 0.896730 no
Casing YFB_stipe_center 0.721630 no
Casing YFB_stipe_shell 0.419197 no
Casing YFB_stipe_skin 0.436940 no
Casing YFB_cap_skin 0.184709 no
Casing YFB_cap_tissue 0.830349 no
Casing YFB_gill_tissue 0.145255 no
Casing YFB_veil 0.478926 no
Casing Initials 0.960669 no
Casing Pileal_Stipeal_center 0.517363 no
Casing Pileal_Stipeal_shell 0.642476 no
Casing DIF_stipe_center 0.882336 no
Casing DIF_stipe_shell 0.429326 no
Casing DIF_stipe_skin 0.579205 no
Casing DIF_cap_skin 0.808105 no
Casing DIF_cap_tissue 0.875784 no
DIF_gill_tissue YFB_stipe_center 0.865135 no
DIF_gill_tissue YFB_stipe_shell 0.572046 no
DIF_gill_tissue YFB_stipe_skin 0.591830 no
DIF_gill_tissue YFB_cap_skin 0.296901 no
DIF_gill_tissue YFB_cap_tissue 0.950703 no
DIF_gill_tissue YFB_gill_tissue 0.242017 no
DIF_gill_tissue YFB_veil 0.640673 no
YFB_stipe_center YFB_stipe_shell 0.778944 no
YFB_stipe_center YFB_stipe_skin 0.793873 no
YFB_stipe_center YFB_cap_skin 0.492141 no
YFB_stipe_center YFB_cap_tissue 0.926006 no
YFB_stipe_center YFB_gill_tissue 0.428612 no
YFB_stipe_center YFB_veil 0.837538 no
YFB_stipe_shell YFB_stipe_skin 0.986527 no
YFB_stipe_shell YFB_cap_skin 0.792247 no
YFB_stipe_shell YFB_cap_tissue 0.662403 no
YFB_stipe_shell YFB_gill_tissue 0.732019 no
YFB_stipe_shell YFB_veil 0.960549 no
YFB_stipe_skin YFB_cap_skin 0.768585 no
YFB_stipe_skin YFB_cap_tissue 0.684057 no
YFB_stipe_skin YFB_gill_tissue 0.709185 no
YFB_stipe_skin YFB_veil 0.973808 no
YFB_cap_skin YFB_cap_tissue 0.374879 no
YFB_cap_skin YFB_gill_tissue 0.964316 no
YFB_cap_skin YFB_veil 0.724478 no
YFB_cap_tissue YFB_gill_tissue 0.313067 no
YFB_cap_tissue YFB_veil 0.725446 no
YFB_gill_tissue YFB_veil 0.658032 no
Initials DIF_gill_tissue 0.942632 no
Initials YFB_stipe_center 0.783748 no
Initials YFB_stipe_shell 0.479802 no
Initials YFB_stipe_skin 0.498782 no
Initials YFB_cap_skin 0.232204 no
Initials YFB_cap_tissue 0.884732 no
Initials YFB_gill_tissue 0.191220 no
Initials YFB_veil 0.542795 no
Initials Pileal_Stipeal_center 0.582590 no
Initials Pileal_Stipeal_shell 0.708521 no
Initials DIF_stipe_center 0.929558 no
Initials DIF_stipe_shell 0.488913 no
Initials DIF_stipe_skin 0.644396 no
Initials DIF_cap_skin 0.865286 no
Initials DIF_cap_tissue 0.924526 no
Pileal_Stipeal_center DIF_gill_tissue 0.685431 no
Pileal_Stipeal_center YFB_stipe_center 0.872098 no
Pileal_Stipeal_center YFB_stipe_shell 0.933885 no
Pileal_Stipeal_center YFB_stipe_skin 0.948888 no
Pileal_Stipeal_center YFB_cap_skin 0.690658 no
Pileal_Stipeal_center YFB_cap_tissue 0.765212 no
Pileal_Stipeal_center YFB_gill_tissue 0.624557 no
Pileal_Stipeal_center YFB_veil 0.977425 no
Pileal_Stipeal_center Pileal_Stipeal_shell 0.925332 no
Pileal_Stipeal_center DIF_stipe_center 0.702338 no
Pileal_Stipeal_center DIF_stipe_shell 0.944185 no
Pileal_Stipeal_center DIF_stipe_skin 0.968938 no
Pileal_Stipeal_center DIF_cap_skin 0.791443 no
Pileal_Stipeal_center DIF_cap_tissue 0.709609 no
Pileal_Stipeal_shell DIF_gill_tissue 0.799653 no
Pileal_Stipeal_shell YFB_stipe_center 0.956653 no
Pileal_Stipeal_shell YFB_stipe_shell 0.845399 no
Pileal_Stipeal_shell YFB_stipe_skin 0.862336 no
Pileal_Stipeal_shell YFB_cap_skin 0.564908 no
Pileal_Stipeal_shell YFB_cap_tissue 0.871770 no
Pileal_Stipeal_shell YFB_gill_tissue 0.502206 no
Pileal_Stipeal_shell YFB_veil 0.898022 no
Pileal_Stipeal_shell DIF_stipe_center 0.814892 no
Pileal_Stipeal_shell DIF_stipe_shell 0.856231 no
Pileal_Stipeal_shell DIF_stipe_skin 0.960281 no
Pileal_Stipeal_shell DIF_cap_skin 0.891705 no
Pileal_Stipeal_shell DIF_cap_tissue 0.820143 no
DIF_stipe_center DIF_gill_tissue 0.989318 no
DIF_stipe_center YFB_stipe_center 0.877905 no
DIF_stipe_center YFB_stipe_shell 0.590463 no
DIF_stipe_center YFB_stipe_skin 0.610417 no
DIF_stipe_center YFB_cap_skin 0.311077 no
DIF_stipe_center YFB_cap_tissue 0.962070 no
DIF_stipe_center YFB_gill_tissue 0.251862 no
DIF_stipe_center YFB_veil 0.656991 no
DIF_stipe_center DIF_stipe_shell 0.598022 no
DIF_stipe_center DIF_stipe_skin 0.756006 no
DIF_stipe_center DIF_cap_skin 0.944898 no
DIF_stipe_center DIF_cap_tissue 0.995063 no
DIF_stipe_shell DIF_gill_tissue 0.585078 no
DIF_stipe_shell YFB_stipe_center 0.796609 no
DIF_stipe_shell YFB_stipe_shell 0.989318 no
DIF_stipe_shell YFB_stipe_skin 0.995917 no
DIF_stipe_shell YFB_cap_skin 0.776570 no
DIF_stipe_shell YFB_cap_tissue 0.675935 no
DIF_stipe_shell YFB_gill_tissue 0.714199 no
DIF_stipe_shell YFB_veil 0.970544 no
DIF_stipe_shell DIF_stipe_skin 0.909444 no
DIF_stipe_shell DIF_cap_skin 0.704658 no
DIF_stipe_shell DIF_cap_tissue 0.611401 no
DIF_stipe_skin DIF_gill_tissue 0.738529 no
DIF_stipe_skin YFB_stipe_center 0.912946 no
DIF_stipe_skin YFB_stipe_shell 0.897850 no
DIF_stipe_skin YFB_stipe_skin 0.914761 no
DIF_stipe_skin YFB_cap_skin 0.637240 no
DIF_stipe_skin YFB_cap_tissue 0.814805 no
DIF_stipe_skin YFB_gill_tissue 0.572746 no
DIF_stipe_skin YFB_veil 0.946271 no
DIF_stipe_skin DIF_cap_skin 0.839730 no
DIF_stipe_skin DIF_cap_tissue 0.760720 no
DIF_cap_skin DIF_gill_tissue 0.932506 no
DIF_cap_skin YFB_stipe_center 0.944518 no
DIF_cap_skin YFB_stipe_shell 0.690174 no
DIF_cap_skin YFB_stipe_skin 0.707616 no
DIF_cap_skin YFB_cap_skin 0.391952 no
DIF_cap_skin YFB_cap_tissue 0.985137 no
DIF_cap_skin YFB_gill_tissue 0.334259 no
DIF_cap_skin YFB_veil 0.752525 no
DIF_cap_skin DIF_cap_tissue 0.949363 no
DIF_cap_tissue DIF_gill_tissue 0.985328 no
DIF_cap_tissue YFB_stipe_center 0.884211 no
DIF_cap_tissue YFB_stipe_shell 0.602202 no
DIF_cap_tissue YFB_stipe_skin 0.620443 no
DIF_cap_tissue YFB_cap_skin 0.317790 no
DIF_cap_tissue YFB_cap_tissue 0.967013 no
DIF_cap_tissue YFB_gill_tissue 0.263203 no
DIF_cap_tissue YFB_veil 0.664861 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|085860
MDYNHYKDISVDRDGPVLTICINRAKRRNTINSNLIEELIHVFGLVDQDDQIRVAILTAEPTAPAFCSGADISGG
WDVLWKPDAEKEGPQAHRDDGGRASIAIYRCRKITISAVNGHAAGAGLTTFQLPFDIRLIWAGAKLTFPFVRRGI
VPEATSSYLLPRLLGHSRANSLILTGETVTPDSPHIRDLYHQILPTRDAVYPAAKALADELAASTSQVSIAFAKG
LLQHPGDSIEENHLLDSKAIKATAGSKDAAEGVKAFFEKRTPKYTGVLSNDLPHWVPWWRRLDIKHLKSKL*
Coding >AgabiH97|085860
ATGGACTACAACCACTACAAGGACATCTCTGTCGACCGCGACGGCCCCGTACTCACCATATGCATTAACCGTGCC
AAACGGCGGAATACCATCAACAGTAACCTCATCGAGGAGCTCATCCATGTCTTTGGGCTCGTCGACCAGGACGAC
CAAATTCGGGTCGCCATTCTCACTGCGGAGCCAACAGCACCCGCATTCTGCTCTGGGGCCGACATTTCTGGTGGT
TGGGATGTACTCTGGAAGCCAGATGCCGAGAAAGAGGGCCCACAAGCCCATAGAGATGATGGCGGCCGTGCCTCC
ATAGCTATCTACCGCTGTCGCAAAATCACCATATCCGCAGTGAATGGCCACGCAGCAGGCGCCGGACTAACGACT
TTCCAACTCCCATTTGACATCCGTCTCATTTGGGCTGGTGCTAAACTCACTTTCCCTTTCGTACGACGCGGTATC
GTTCCTGAAGCTACCTCAAGCTACCTTCTACCTCGACTCCTCGGGCATTCGCGAGCCAATTCTCTGATTCTCACA
GGAGAAACCGTGACTCCGGATTCACCTCACATCCGCGATCTCTACCATCAAATTCTCCCTACACGAGATGCTGTC
TATCCTGCTGCCAAAGCCCTTGCCGATGAACTCGCTGCTAGTACATCTCAGGTTTCAATTGCCTTTGCCAAGGGT
CTCTTACAACACCCCGGGGATAGTATTGAAGAAAACCATCTTCTCGATTCTAAGGCAATCAAGGCCACTGCTGGT
AGCAAAGACGCCGCTGAAGGCGTCAAGGCTTTCTTCGAAAAACGAACACCCAAATATACAGGTGTCCTATCAAAT
GATTTACCTCATTGGGTCCCTTGGTGGCGCAGATTGGACATCAAGCATCTCAAATCCAAACTATAA
Transcript >AgabiH97|085860
ATGGACTACAACCACTACAAGGACATCTCTGTCGACCGCGACGGCCCCGTACTCACCATATGCATTAACCGTGCC
AAACGGCGGAATACCATCAACAGTAACCTCATCGAGGAGCTCATCCATGTCTTTGGGCTCGTCGACCAGGACGAC
CAAATTCGGGTCGCCATTCTCACTGCGGAGCCAACAGCACCCGCATTCTGCTCTGGGGCCGACATTTCTGGTGGT
TGGGATGTACTCTGGAAGCCAGATGCCGAGAAAGAGGGCCCACAAGCCCATAGAGATGATGGCGGCCGTGCCTCC
ATAGCTATCTACCGCTGTCGCAAAATCACCATATCCGCAGTGAATGGCCACGCAGCAGGCGCCGGACTAACGACT
TTCCAACTCCCATTTGACATCCGTCTCATTTGGGCTGGTGCTAAACTCACTTTCCCTTTCGTACGACGCGGTATC
GTTCCTGAAGCTACCTCAAGCTACCTTCTACCTCGACTCCTCGGGCATTCGCGAGCCAATTCTCTGATTCTCACA
GGAGAAACCGTGACTCCGGATTCACCTCACATCCGCGATCTCTACCATCAAATTCTCCCTACACGAGATGCTGTC
TATCCTGCTGCCAAAGCCCTTGCCGATGAACTCGCTGCTAGTACATCTCAGGTTTCAATTGCCTTTGCCAAGGGT
CTCTTACAACACCCCGGGGATAGTATTGAAGAAAACCATCTTCTCGATTCTAAGGCAATCAAGGCCACTGCTGGT
AGCAAAGACGCCGCTGAAGGCGTCAAGGCTTTCTTCGAAAAACGAACACCCAAATATACAGGTGTCCTATCAAAT
GATTTACCTCATTGGGTCCCTTGGTGGCGCAGATTGGACATCAAGCATCTCAAATCCAAACTATAA
Gene >AgabiH97|085860
ATGGACTACAACCACTACAAGGACATCTCTGTCGACCGCGACGGCCCCGTACTCACCATATGCATTAACCGTGCC
AAACGGTAAGCACAATCATCTCCTTCACTCGCCGCACTTCTCCTAACGGCAACCAGGCGGAATACCATCAACAGT
AACCTCATCGAGGAGCTCATCCATGTCTTTGGGCTCGTCGACCAGGACGACCAAATTCGGGTCGCCATTCTCACT
GCGGAGCCAACAGCACCCGCATTCTGCTCTGGGGTAACAATTCTTGCCAATGTTGCACTCAATACTGCTTGCTAA
CTTCTCTCTTTACAGGCCGACATTTCTGGTGGTTGGGATGTACTCTGGAAGCCAGATGCCGAGAAAGAGGGCCCA
CAAGGTAAGAGTATCACCGAGGAATTTTGCCAAGTTTACCAACCCTACTTCCAGCCCATAGAGATGATGGCGGCC
GTGCCTCCATAGCTATCTACCGCTGTCGCAAAATCACCATATCCGCAGTGAATGGCCACGCAGTACGTTCATTTC
ACCTGGGTAGGAATGCTGCTGATTCTTTTGTTGACAGGCAGGCGCCGGACTAACGACTTTCCAACTCCCATTTGA
CATCCGTCTCATTTGGGCTGGTGCTAAACTCACTTTCCCTTTCGTACGACGCGGTATCGTTCCTGAAGGTAAAGC
TCTATCTCATGCCACGAGCCGTGTGACTCATCCTTTGTGTACGACTCAGCTACCTCAAGCTACCTTCTACCTCGA
CTCCTCGGGCATTCGCGAGCCAATTCTCTGATTCTCACAGGAGAAACCGTGACTCCGGATTCACCTCACATCCGC
GATCTCTACCATCAAATTCTCCCTACACGAGATGCTGTCTATCCTGCTGCCAAAGCCCTTGCCGATGAACTCGCT
GCTAGTACATCTCAGGTTTCAATTGCCTTTGCCAAGGGTCTCTTACAACACCCCGGGGATAGTATTGAAGAAAAC
CATCTTCTCGATTCTAAGGCAATCAAGGCCACTGCTGGTAGCAAAGACGCCGCTGAAGGCGTCAAGGCTTTCTTC
GAAAAACGAACACCCAAATATACAGGTGTCCTATCAAATGATTTACCTCATTGGGTCCCTTGGGTGAGCCATGCT
ACGCCCTCATCAGCATTTTTAGATCTCACTTTCGCATGCAGTGGCGCAGATTGGACATCAAGCATCTCAAATCCA
AACTATAA

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