© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|085460 |
| Gene name | |
| Location | scaffold_5:1813480..1815822 |
| Strand | + |
| Gene length (bp) | 2342 |
| Transcript length (bp) | 1758 |
| Coding sequence length (bp) | 1758 |
| Protein length (aa) | 586 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.6E-19 | 104 | 478 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P46996|YJQ3_YEAST | Uncharacterized membrane protein YJL163C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJL163C PE=1 SV=1 | 89 | 493 | 5.0E-17 |
| sp|O13714|YDZ7_SCHPO | Uncharacterized membrane protein C14C4.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC14C4.07 PE=1 SV=1 | 84 | 503 | 4.0E-09 |
| sp|P02982|TCR1_ECOLX | Tetracycline resistance protein, class A OS=Escherichia coli GN=tetA PE=3 SV=2 | 106 | 515 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 58 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 37 | 56 | 19 |
| 2 | 102 | 121 | 19 |
| 3 | 131 | 150 | 19 |
| 4 | 163 | 185 | 22 |
| 5 | 200 | 222 | 22 |
| 6 | 229 | 251 | 22 |
| 7 | 276 | 298 | 22 |
| 8 | 314 | 336 | 22 |
| 9 | 351 | 373 | 22 |
| 10 | 495 | 517 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|085460 MHPHHHTGHEEENSLIARDDVQHQPFRTTLPFVRYRAHTYWLLPVILVFSMSRGITSSPRIQVYKAIACRALMDN STDFTSLADLPGCDSSDVQARAAKIQAGVITCMSVLSAISTGFWSRLGDAHGRKPILITFMSGALVMEAVFVLVM RQNSFFGRHAEQLIYLGPAAEGFVGGLSTFNGVVHAYVADCTRHGSRSKVFSTIQGIVFVGLSLGPWFGGLFLPK TGYSHSFFLCSIGLLICTILYVLFICPESKFPSETADNSPSDFQRLKHSPIQAMRHVSVKFITALLSPLFVFAPQ RIRGTNKRSWNMTLVGLSFLIYCISIGVYSAKYLYAQHVYTWTTAQLGYYMSTLWISRALNLLLVLPIVIHYLKP KRSSPGNQPSPSDVAAELVFDKYLAQISLLVDGLADALVAAISNKSQATFVVLSCLSSFTSGGNPALQSLAAVCL HALGHSDEAGTLFGALGVLNSVAHIISPTLYATTYGATVASFPQAIFVLAACLLFTIVALLLGVWPASVIPNSTA LSDPETNPLSGDFSDPTDHSEDFLPSDSIDRESGTDYKYNGIGTSPPRTNSGGFEGSHHS* |
| Coding | >AgabiH97|085460 ATGCATCCCCACCACCACACAGGCCATGAGGAGGAGAACTCCCTCATCGCCAGAGACGATGTCCAGCACCAGCCA TTTCGTACTACGCTTCCCTTTGTGCGCTACAGAGCACACACCTACTGGCTCCTCCCCGTCATCCTCGTGTTTTCC ATGTCTCGCGGTATCACGTCCTCACCCAGAATACAAGTCTACAAGGCCATTGCATGTCGCGCGCTCATGGACAAC TCGACTGATTTCACAAGCCTCGCTGACTTACCAGGGTGCGACAGCTCCGATGTCCAAGCCCGGGCAGCAAAGATA CAAGCTGGTGTCATTACCTGCATGAGCGTTCTCAGTGCTATCTCAACCGGTTTCTGGAGCCGACTGGGGGATGCT CATGGCAGGAAACCTATCCTTATCACCTTCATGTCTGGTGCACTCGTCATGGAAGCTGTCTTTGTGCTCGTTATG CGCCAGAACTCATTTTTTGGTCGTCATGCCGAACAGCTCATATATCTAGGGCCGGCTGCTGAAGGCTTTGTTGGT GGCTTATCAACTTTTAATGGTGTCGTTCATGCTTACGTCGCGGACTGCACTAGGCATGGATCCAGGTCAAAAGTC TTCTCCACTATACAAGGCATCGTATTTGTTGGCCTTTCCCTTGGCCCTTGGTTTGGTGGCCTCTTCCTACCAAAG ACCGGATACAGCCATTCTTTTTTTCTCTGCAGCATTGGCCTTCTAATATGCACCATTCTATATGTGCTTTTCATT TGCCCAGAGTCCAAGTTCCCCTCGGAAACTGCGGACAACTCTCCGAGTGACTTCCAACGACTCAAACATTCTCCT ATTCAGGCTATGCGCCATGTCTCAGTGAAGTTTATTACCGCCCTTCTGTCGCCCTTGTTCGTGTTTGCACCCCAA CGTATCCGAGGAACGAATAAGAGAAGTTGGAATATGACCTTGGTCGGACTCAGCTTTTTAATCTACTGTATATCA ATTGGCGTATATTCAGCCAAATACCTCTATGCTCAACATGTCTATACATGGACAACAGCTCAGCTTGGATACTAT ATGTCGACGCTATGGATATCCAGAGCACTCAACCTCTTATTGGTCCTTCCAATCGTCATTCATTATCTTAAACCA AAGCGTTCATCTCCCGGAAATCAACCGTCTCCTTCCGACGTCGCTGCAGAATTGGTATTTGATAAGTACCTGGCC CAGATATCCTTATTAGTGGACGGGTTAGCAGACGCCCTCGTCGCCGCCATCTCTAATAAATCGCAAGCAACGTTT GTCGTTCTCTCATGCCTATCATCTTTCACCAGTGGAGGCAACCCGGCTCTACAGTCCCTTGCCGCAGTATGTCTA CATGCACTTGGCCATTCTGATGAAGCTGGTACATTGTTTGGTGCGTTGGGAGTATTAAATTCAGTGGCGCATATC ATTTCTCCAACCTTGTATGCGACAACATACGGAGCTACAGTTGCTTCTTTCCCACAAGCTATCTTTGTTTTGGCG GCCTGCCTTCTGTTCACGATTGTCGCACTCTTGCTTGGAGTGTGGCCGGCATCAGTCATCCCAAATTCTACCGCC CTTTCTGATCCAGAAACTAATCCGCTAAGTGGAGACTTTTCCGACCCTACAGATCATTCCGAAGATTTCCTACCT TCGGACAGTATAGACAGGGAATCAGGGACTGATTACAAGTATAATGGCATTGGAACATCGCCGCCAAGAACTAAT TCTGGGGGTTTTGAAGGTTCACATCACTCGTAA |
| Transcript | >AgabiH97|085460 ATGCATCCCCACCACCACACAGGCCATGAGGAGGAGAACTCCCTCATCGCCAGAGACGATGTCCAGCACCAGCCA TTTCGTACTACGCTTCCCTTTGTGCGCTACAGAGCACACACCTACTGGCTCCTCCCCGTCATCCTCGTGTTTTCC ATGTCTCGCGGTATCACGTCCTCACCCAGAATACAAGTCTACAAGGCCATTGCATGTCGCGCGCTCATGGACAAC TCGACTGATTTCACAAGCCTCGCTGACTTACCAGGGTGCGACAGCTCCGATGTCCAAGCCCGGGCAGCAAAGATA CAAGCTGGTGTCATTACCTGCATGAGCGTTCTCAGTGCTATCTCAACCGGTTTCTGGAGCCGACTGGGGGATGCT CATGGCAGGAAACCTATCCTTATCACCTTCATGTCTGGTGCACTCGTCATGGAAGCTGTCTTTGTGCTCGTTATG CGCCAGAACTCATTTTTTGGTCGTCATGCCGAACAGCTCATATATCTAGGGCCGGCTGCTGAAGGCTTTGTTGGT GGCTTATCAACTTTTAATGGTGTCGTTCATGCTTACGTCGCGGACTGCACTAGGCATGGATCCAGGTCAAAAGTC TTCTCCACTATACAAGGCATCGTATTTGTTGGCCTTTCCCTTGGCCCTTGGTTTGGTGGCCTCTTCCTACCAAAG ACCGGATACAGCCATTCTTTTTTTCTCTGCAGCATTGGCCTTCTAATATGCACCATTCTATATGTGCTTTTCATT TGCCCAGAGTCCAAGTTCCCCTCGGAAACTGCGGACAACTCTCCGAGTGACTTCCAACGACTCAAACATTCTCCT ATTCAGGCTATGCGCCATGTCTCAGTGAAGTTTATTACCGCCCTTCTGTCGCCCTTGTTCGTGTTTGCACCCCAA CGTATCCGAGGAACGAATAAGAGAAGTTGGAATATGACCTTGGTCGGACTCAGCTTTTTAATCTACTGTATATCA ATTGGCGTATATTCAGCCAAATACCTCTATGCTCAACATGTCTATACATGGACAACAGCTCAGCTTGGATACTAT ATGTCGACGCTATGGATATCCAGAGCACTCAACCTCTTATTGGTCCTTCCAATCGTCATTCATTATCTTAAACCA AAGCGTTCATCTCCCGGAAATCAACCGTCTCCTTCCGACGTCGCTGCAGAATTGGTATTTGATAAGTACCTGGCC CAGATATCCTTATTAGTGGACGGGTTAGCAGACGCCCTCGTCGCCGCCATCTCTAATAAATCGCAAGCAACGTTT GTCGTTCTCTCATGCCTATCATCTTTCACCAGTGGAGGCAACCCGGCTCTACAGTCCCTTGCCGCAGTATGTCTA CATGCACTTGGCCATTCTGATGAAGCTGGTACATTGTTTGGTGCGTTGGGAGTATTAAATTCAGTGGCGCATATC ATTTCTCCAACCTTGTATGCGACAACATACGGAGCTACAGTTGCTTCTTTCCCACAAGCTATCTTTGTTTTGGCG GCCTGCCTTCTGTTCACGATTGTCGCACTCTTGCTTGGAGTGTGGCCGGCATCAGTCATCCCAAATTCTACCGCC CTTTCTGATCCAGAAACTAATCCGCTAAGTGGAGACTTTTCCGACCCTACAGATCATTCCGAAGATTTCCTACCT TCGGACAGTATAGACAGGGAATCAGGGACTGATTACAAGTATAATGGCATTGGAACATCGCCGCCAAGAACTAAT TCTGGGGGTTTTGAAGGTTCACATCACTCGTAA |
| Gene | >AgabiH97|085460 ATGCATCCCCACCACCACACAGGCCATGAGGAGGAGAACTCCCTCATCGCCAGAGACGATGTCCAGCACCAGCCA TTTCGTACTACGCTTCCCTTTGTGCGCTACAGAGCACACACCTACTGGTAAATACTCCCAGTTCCCTGTCTGCCC GCTTCCGCTCACCCTGGCACCCCAGGCTCCTCCCCGTCATCCTCGTGTTTTCCATGTCTGCAAGTAAAAATCATC TACCCCTCGCTCCATGTGCTCATATTGTGACTCGTAGCGCGGTATCACGTCCTCACCCAGAATACAAGTCTACAA GGCCATTGCATGTCGCGCGCTCATGGACAACTCGACTGATTTCACAAGCCTCGCTGACTTACCAGGGTGCGACAG CTCCGATGTCCAAGCCCGGGCAGCAAAGATACAAGCTGGTAGGTCGCGCTTTTCTTTTGCCAAATGTCATCTAAA TAATCATAGGTGTCATTACCTGCATGAGCGTTCTCAGTGCTATCTCAACCGGTTTCTGGAGCCGACTGGGGGATG CTCATGGCAGGAAACCTATCCTTATCACCTTCATGTCTGGTGCACTCGTCATGTGCGTTCCCCCATTGCCTTCTG CTTGACTACATCTCATATTCTTTCACAGGGAAGCTGTCTTTGTGCTCGTTATGCGCCAGAACTCATTTTTTGGTC GTCATGCCGAACAGCTCATATATCTAGGGCCGGCTGCTGAAGGCTTTGTTGGTGGCTTATCAACTTTTAATGGTG TCGTTCATGCGTCAGCGTCCACCTTTTTTCTCTGTTGCCCCATCATCTGAATTGTTTCAAAGTTACGTCGCGGAC TGCACTAGGCATGGATCCAGGTGAGTAGCGAGTCAACCATTTATTCTGTATACCGACCGTACTAGGTCAAAAGTC TTCTCCACTATACAAGGCATCGTATTTGTTGGCCTTTCCCTTGGCCCTTGGGTAGGTCGCCCCAATATCACTAAT CTGGAAAATATGCTCACGTCTCTTAGTTTGGTGGCCTCTTCCTACCAAAGACCGGATACAGCCATTCTTTTTTTC TCTGCAGCATTGGCCTTCTAATATGCACCATTCTATATGTGCTTTTCATTTGCCCAGAGTCCAAGTTCCCCTCGG AAACTGCGGACAACTCTCCGAGTGACTTCCAACGACTCAAACATTCTCCTATTCAGGCTATGCGCCATGTCTCAG TGAAGTTTATTACCGCCCTTCTGTCGCCCTTGTTCGTGTTTGCACCCCAACGTATCCGAGGAACGAATAAGAGAA GTTGGAATATGACCTTGGTCGGACTCAGCTTTTTAATCTACTGTATATCAATTGTGAGTAATACTGTCCACGGTT ATCTTCCATTCTTCTCTCTGATAGCTATCAGGGCGTATATTCAGCCAAATACCTCTATGCTCAACATGTCTATAC ATGGACAACAGCTCAGGTGAAGCAGAAACATTGCAATACAATCTATTGATGGACTGTTGCTGACGATTGTCCGAT AGCTTGGATACTATATGTCGACGCTATGGATATCCAGAGCACTCAACCTCTTATTGGTCCTTCCAAGCAAGTAAC CTCCTTTTGTCTCCTGTTCCTACGCTAACCAGCTGCATAGTCGTCATTCATTATCTTAAACCAAAGCGTTCATCT CCCGGAAATCAACCGTCTCCTTCCGACGTCGCTGCAGAATTGGTATTTGATAAGTACCTGGCCCAGATATCCTTA TTAGTGGACGGGTTAGCAGACGCCCTCGTCGCCGCCATCTCTAATAAATCGCAAGCAACGTTTGTCGTTCTCTCA TGCCTATCATCTTTCACCAGTGGAGGCAACCCGGCTCTACAGTCCCTTGCCGCAGTATGTCTACATGCACTTGGC CATTCTGATGAAGCTGGTACATTGTTTGGTGCGTTGGGAGTATTAAATTCAGTGGCGCATATCATTTCTGTCAGT CAAATTTTGCCGTCTATCTAATTCTTGATGATCTTTCGGCTGACGCTTCTCCTATCGTATCACAGCCAACCTTGT ATGCGACAACATACGGAGCTACAGTTGCTTCTTTCCCACAAGCTATCTTTGTTTTGGCGGCCTGCCTTCTGTTCA CGATTGTCGCACTCTTGCTTGGAGTGTGGCCGGCATCAGTCATCCCAAATTCTACCGCCCTTTCTGATCCAGAAA CTAATCCGCTAAGTGGAGACTTTTCCGACCCTACAGATCATTCCGAAGATTTCCTACCTTCGGACAGTATAGACA GGGAATCAGGGACTGATTACAAGTATAATGGCATTGGAACATCGCCGCCAAGAACTAATTCTGGGGGTTTTGAAG GTTCACATCACTCGTAA |