Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|085190
Gene name
Locationscaffold_5:1743123..1744793
Strand+
Gene length (bp)1670
Transcript length (bp)1287
Coding sequence length (bp)1287
Protein length (aa) 429

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|085190
MQLGLASVLLSIVLACHATPSPKCAAPGKFMTDKYFGDASASAEVIGATFITSDEPTGNFIIAADINSDGMMTLR
RAIYAGGVGAHGLHDLGPDPLFSQGTIDINSEKQVLATVNAGSNTIVAFKINSDDPTDLKMLGKPVNSYGEFPVA
VVINKAGDKVCALNSGAHDGVSCYTLDLEKGLIDIPNTVRPVGLNQTTPSTGTSGTVSTIAFSEDESKLFVAVKG
TTPEANFDEHPGFFAVWDIQADGSLSEKYLRVPVPEGGQQPFSFTPIPGQNALLGADGGAGFYIWDLSTLDQGIP
GPRSSVTPVIGRSAVCWSRYSSCTGNFYVVDGVISNITQVTLDDDLKPTSVINFPQGIFDTTLDFDIMPVNDQDH
MYILAANATALRVMQLAPNEINQLQSIDLAAPSATVGLTINPNNLQGLRVFMK*
Coding >AgabiH97|085190
ATGCAACTTGGCTTGGCCTCCGTTCTCCTCTCCATCGTGTTGGCATGCCACGCCACACCTTCTCCCAAGTGCGCT
GCACCAGGGAAGTTCATGACAGACAAATACTTTGGTGACGCGAGTGCGAGCGCAGAGGTGATTGGTGCAACCTTC
ATCACCAGCGATGAGCCCACAGGCAACTTCATCATCGCCGCAGACATTAACTCCGATGGCATGATGACTCTGAGA
AGAGCTATCTACGCCGGTGGTGTCGGTGCCCACGGTCTTCATGATCTCGGCCCAGACCCTCTGTTCAGTCAAGGA
ACCATCGACATCAACTCAGAAAAGCAAGTTTTGGCGACCGTCAACGCTGGGTCCAACACCATTGTGGCATTCAAG
ATTAACTCGGATGACCCAACGGACTTGAAGATGCTCGGCAAGCCCGTGAACAGCTACGGAGAATTCCCTGTCGCT
GTTGTTATCAACAAAGCTGGAGACAAGGTGTGCGCCCTTAACTCGGGTGCTCACGACGGTGTCAGTTGCTACACC
CTTGATTTGGAGAAGGGTTTGATCGATATTCCCAACACCGTTCGTCCCGTGGGGCTTAACCAAACCACTCCTTCG
ACCGGAACTTCCGGAACAGTCAGCACCATCGCATTTTCCGAGGACGAGTCGAAGCTCTTCGTCGCGGTCAAGGGC
ACCACTCCCGAAGCGAACTTTGATGAACATCCCGGATTCTTCGCCGTTTGGGACATTCAAGCGGACGGATCCCTG
TCTGAGAAGTACCTTCGTGTTCCCGTTCCCGAGGGCGGCCAGCAACCATTCTCGTTCACCCCGATTCCCGGACAA
AATGCGCTCCTTGGTGCTGACGGTGGTGCCGGATTCTACATCTGGGACTTGTCGACGCTTGATCAGGGCATCCCA
GGACCTCGCTCTTCAGTTACCCCGGTTATTGGACGGTCCGCAGTTTGCTGGTCGCGTTACAGCTCGTGCACCGGT
AACTTCTACGTTGTCGATGGTGTGATCTCCAACATCACCCAGGTCACCCTCGACGATGACTTGAAGCCGACCTCG
GTCATCAACTTCCCTCAAGGCATTTTCGATACCACCCTTGACTTCGACATTATGCCTGTCAACGACCAGGACCAC
ATGTACATTCTCGCTGCCAACGCGACGGCTCTTCGTGTGATGCAATTGGCACCTAATGAAATCAACCAGCTCCAG
TCAATCGACTTGGCCGCCCCTTCTGCCACTGTTGGCCTCACGATCAACCCCAACAACCTCCAGGGATTGAGAGTG
TTCATGAAATAG
Transcript >AgabiH97|085190
ATGCAACTTGGCTTGGCCTCCGTTCTCCTCTCCATCGTGTTGGCATGCCACGCCACACCTTCTCCCAAGTGCGCT
GCACCAGGGAAGTTCATGACAGACAAATACTTTGGTGACGCGAGTGCGAGCGCAGAGGTGATTGGTGCAACCTTC
ATCACCAGCGATGAGCCCACAGGCAACTTCATCATCGCCGCAGACATTAACTCCGATGGCATGATGACTCTGAGA
AGAGCTATCTACGCCGGTGGTGTCGGTGCCCACGGTCTTCATGATCTCGGCCCAGACCCTCTGTTCAGTCAAGGA
ACCATCGACATCAACTCAGAAAAGCAAGTTTTGGCGACCGTCAACGCTGGGTCCAACACCATTGTGGCATTCAAG
ATTAACTCGGATGACCCAACGGACTTGAAGATGCTCGGCAAGCCCGTGAACAGCTACGGAGAATTCCCTGTCGCT
GTTGTTATCAACAAAGCTGGAGACAAGGTGTGCGCCCTTAACTCGGGTGCTCACGACGGTGTCAGTTGCTACACC
CTTGATTTGGAGAAGGGTTTGATCGATATTCCCAACACCGTTCGTCCCGTGGGGCTTAACCAAACCACTCCTTCG
ACCGGAACTTCCGGAACAGTCAGCACCATCGCATTTTCCGAGGACGAGTCGAAGCTCTTCGTCGCGGTCAAGGGC
ACCACTCCCGAAGCGAACTTTGATGAACATCCCGGATTCTTCGCCGTTTGGGACATTCAAGCGGACGGATCCCTG
TCTGAGAAGTACCTTCGTGTTCCCGTTCCCGAGGGCGGCCAGCAACCATTCTCGTTCACCCCGATTCCCGGACAA
AATGCGCTCCTTGGTGCTGACGGTGGTGCCGGATTCTACATCTGGGACTTGTCGACGCTTGATCAGGGCATCCCA
GGACCTCGCTCTTCAGTTACCCCGGTTATTGGACGGTCCGCAGTTTGCTGGTCGCGTTACAGCTCGTGCACCGGT
AACTTCTACGTTGTCGATGGTGTGATCTCCAACATCACCCAGGTCACCCTCGACGATGACTTGAAGCCGACCTCG
GTCATCAACTTCCCTCAAGGCATTTTCGATACCACCCTTGACTTCGACATTATGCCTGTCAACGACCAGGACCAC
ATGTACATTCTCGCTGCCAACGCGACGGCTCTTCGTGTGATGCAATTGGCACCTAATGAAATCAACCAGCTCCAG
TCAATCGACTTGGCCGCCCCTTCTGCCACTGTTGGCCTCACGATCAACCCCAACAACCTCCAGGGATTGAGAGTG
TTCATGAAATAG
Gene >AgabiH97|085190
ATGCAACTTGGCTTGGCCTCCGTTCTCCTCTCCATCGTGTTGGCATGCCACGCCACACCTTCTCCCAAGTGCGCT
GCACCAGGGAAGTTCATGACAGACAAATACTTTGGTGACGCGAGTGCGAGCGCAGAGGTGATTGGTGCAACCTTC
AGTAAATTTGTGTTTCTGGTTGTTGTACCGTTCCGGAGCTAATATCTGTGTTACAGTCACCAGCGATGAGCCCAC
AGGCAACTTCATCATCGCCGCAGACATTAACTCCGATGGCATGATGGTGAGAGCCTGACCTGATTTTTGCACTTG
CTAGTCAGTTAAACATTTGACCGTCGCAGACTCTGAGAAGAGCTATCTACGCCGGTGGTGTCGGTGCCCACGGTC
TTCATGATCTCGGCCCAGACCCTCTGTTCAGTCAAGGAACCATCGACATCAACTCAGAAAAGCAAGTTTTGGCGA
CCGTCAACGTCAGTTCTTTTCGTTCCGTTGTAAATTCATGTTTTCTGAGAATATTATTCAGGCTGGGTCCAACAC
CATTGTGGCATTCAAGATTAACTCGGATGACCCAACGGACTTGAAGATGCTCGGCAAGCCCGTGAACAGCTACGG
AGAATTCCCTGTCGCTGTTGTTATCAACAAAGCTGGAGACAAGGTGTGCGCCCTTAACTCGGGTGCTCACGACGG
TGTCAGGTAAGACCGCTGCAACCAATTCAAGTTTGGAATTCTGGCTCACTAAATTGAATGACTAGTTGCTACACC
CTTGATTTGGAGAAGGGTTTGATCGATATTCCCAACACCGTTCGTCCCGTGGGGCTTAACCAAACCACTCCTTCG
ACCGGAACTTCCGGAACAGTCAGCACCATCGCATTTTCCGAGGACGAGTCGAAGCTCTTCGTCGCGGTCAAGGGC
ACCACTCCCGAAGCGAACTTTGATGAACATCCCGGATTCTTCGCCGTTTGGGACATTCAAGCGGACGGATCCCTG
TCTGAGAAGTACCTTCGTGTTCCCGTTCCCGAGGGCGGCCAGCAACCATTCTCGTTCACCCCGATTCCCGGACAA
AATGCGCTCCTTGGTGCTGACGGTGGTGCCGGATTCTACATCTGGGACTTGTCGACGCTTGATCAGGGCATCCCA
GGACCTCGCTCTTCAGTTACCCCGGTTATTGGACGGTCCGCAGTTTGCTGGTCGCGTTACAGCTCGTGCACCGGT
AACTTCTACGTTGTCGATGGTGTGATCTCCAACATCACCCAGGTCACCCTCGACGATGACTTGAAGCCGACCTCG
GTCATCGTGAGTGCTTATGCGGTTTGATGTTTGGAGCGATGGCTTATAGACTTTGCAGAACTTCCCTCAAGGCAT
TTTCGATACCACCCTTGACTTCGACATTATGCCTGTCAACGACCAGGAGTAAGCATCAGTTATATTTTCTGAAGC
CATAAACGAGCTTATACTGGATGAATAGCCACATGTACATTCTCGCTGCCAACGCGACGGCTCTTCGTGTGATGC
AATTGGCACCTAATGAAATCAACCAGCTCCAGTCAATCGACTTGGCCGCCCCTTCTGCCACTGTTGGCCTCACGA
TCAGTAAGCATTCCTTTGCATTTTCATCATCGCGATTCTTATTCGGCATTGCAGACCCCAACAACCTCCAGGGAT
TGAGAGTGTTCATGAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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